RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 M0R036 132 aa9.88□□□□□ -0.83
BRCA1-218ENST00000489037 RS1O15537 224 aa9.88□□□□□ -0.83
BRCA1-218ENST00000489037 RNASE3P12724 160 aaKnown RBP9.88□□□□□ -0.83
BRCA1-218ENST00000489037 GYPEP15421 78 aa9.88□□□□□ -0.83
BRCA1-218ENST00000489037 ZNF674Q2M3X9 581 aa9.88□□□□□ -0.83
BRCA1-218ENST00000489037 SYT8Q8NBV8 401 aa9.88□□□□□ -0.83
BRCA1-218ENST00000489037 PGPEP1LA6NFU8 196 aa9.87□□□□□ -0.83
BRCA1-218ENST00000489037 PRSS29PA6NIE9 313 aa9.87□□□□□ -0.83
BRCA1-218ENST00000489037 KRBOX1C9JBD0 128 aa9.87□□□□□ -0.83
BRCA1-218ENST00000489037 CRIP1P50238 77 aa9.87□□□□□ -0.83
BRCA1-218ENST00000489037 CCL20P78556 96 aa9.87□□□□□ -0.83
BRCA1-218ENST00000489037 ZNF506Q5JVG8 444 aa9.87□□□□□ -0.83
BRCA1-218ENST00000489037 PIK3CD-AS1Q5SR53 167 aa9.87□□□□□ -0.83
BRCA1-218ENST00000489037 SH2D6Q7Z4S9 175 aa9.87□□□□□ -0.83
BRCA1-218ENST00000489037 C9orf62Q8N4C0 152 aa9.87□□□□□ -0.83
BRCA1-218ENST00000489037 NHLRC2Q8NBF2 726 aa9.87□□□□□ -0.83
BRCA1-218ENST00000489037 PRADC1Q9BSG0 188 aa9.87□□□□□ -0.83
BRCA1-218ENST00000489037 IL36BQ9NZH7 164 aa9.87□□□□□ -0.83
BRCA1-218ENST00000489037 BIRC6Q9NR09 4857 aa9.87□□□□□ -0.83
BRCA1-218ENST00000489037 GRIFINA4D1Z8 144 aa9.86□□□□□ -0.83
BRCA1-218ENST00000489037 A8MWV9 139 aa9.86□□□□□ -0.83
BRCA1-218ENST00000489037 H3BVH4 76 aa9.86□□□□□ -0.83
BRCA1-218ENST00000489037 K7EQD1 137 aa9.86□□□□□ -0.83
BRCA1-218ENST00000489037 LINC01559Q495D7 138 aa9.86□□□□□ -0.83
BRCA1-218ENST00000489037 DNLZQ5SXM8 178 aa9.86□□□□□ -0.83
BRCA1-218ENST00000489037 CFAP126Q5VTH2 177 aa9.86□□□□□ -0.83
BRCA1-218ENST00000489037 LYPD5Q6UWN5 251 aa9.86□□□□□ -0.83
BRCA1-218ENST00000489037 PHLDA3Q9Y5J5 127 aa9.86□□□□□ -0.83
BRCA1-218ENST00000489037 TMSB15BA0A087X1C1 80 aa9.85□□□□□ -0.83
BRCA1-218ENST00000489037 IGHV3-73A0A0B4J1V6 119 aa9.85□□□□□ -0.83
BRCA1-218ENST00000489037 RTL8CO15255 209 aa9.85□□□□□ -0.83
BRCA1-218ENST00000489037 SIVA1O15304 175 aa9.85□□□□□ -0.83
BRCA1-218ENST00000489037 PDE6DO43924 150 aa9.85□□□□□ -0.83
BRCA1-218ENST00000489037 ARMS2P0C7Q2 107 aa9.85□□□□□ -0.83
BRCA1-218ENST00000489037 GATA1P15976 413 aaPredicted RBP9.85□□□□□ -0.83
BRCA1-218ENST00000489037 TAGLN2P37802 199 aaKnown RBP9.85□□□□□ -0.83
BRCA1-218ENST00000489037 RPL35P42766 123 aaKnown RBP9.85□□□□□ -0.83
BRCA1-218ENST00000489037 C6orf223Q8N319 242 aa9.85□□□□□ -0.83
BRCA1-218ENST00000489037 FRAS1Q86XX4 4008 aa9.85□□□□□ -0.83
BRCA1-218ENST00000489037 TRBV6-4A0A1B0GX49 114 aa9.84□□□□□ -0.83
BRCA1-218ENST00000489037 A0A1W2PPQ1 181 aa9.84□□□□□ -0.83
BRCA1-218ENST00000489037 NXPH4O95158 308 aa9.84□□□□□ -0.83
BRCA1-218ENST00000489037 MGST1P10620 155 aaKnown RBP9.84□□□□□ -0.83
BRCA1-218ENST00000489037 BLOC1S1P78537 153 aa9.84□□□□□ -0.83
BRCA1-218ENST00000489037 MEF2BQ02080 365 aaPredicted RBP9.84□□□□□ -0.83
BRCA1-218ENST00000489037 RHOHQ15669 191 aa9.84□□□□□ -0.83
BRCA1-218ENST00000489037 C11orf52Q96A22 123 aa9.84□□□□□ -0.83
BRCA1-218ENST00000489037 PRR27Q6MZM9 219 aa9.83□□□□□ -0.84
BRCA1-218ENST00000489037 ZFP2Q6ZN57 461 aa9.83□□□□□ -0.84
BRCA1-218ENST00000489037 SLC25A29Q8N8R3 303 aa9.83□□□□□ -0.84
BRCA1-218ENST00000489037 DAZAP1Q96EP5 407 aaKnown RBP9.83□□□□□ -0.84
BRCA1-218ENST00000489037 MLST8Q9BVC4 326 aa9.83□□□□□ -0.84
BRCA1-218ENST00000489037 MED9Q9NWA0 146 aa9.83□□□□□ -0.84
BRCA1-218ENST00000489037 VAX2Q9UIW0 290 aa9.83□□□□□ -0.84
BRCA1-218ENST00000489037 TRAV9-2A0A087WT02 112 aa9.82□□□□□ -0.84
BRCA1-218ENST00000489037 RHODO00212 210 aa9.82□□□□□ -0.84
BRCA1-218ENST00000489037 BCL2P10415 239 aa9.82□□□□□ -0.84
BRCA1-218ENST00000489037 DMRTA1Q5VZB9 504 aa9.82□□□□□ -0.84
BRCA1-218ENST00000489037 ALKAL2Q6UX46 152 aa9.82□□□□□ -0.84
BRCA1-218ENST00000489037 ZFP82Q8N141 532 aa9.82□□□□□ -0.84
BRCA1-218ENST00000489037 PARLQ9H300 379 aa9.82□□□□□ -0.84
BRCA1-218ENST00000489037 LOC100131303A0A0U1RQF7 123 aa9.81□□□□□ -0.84
BRCA1-218ENST00000489037 A0A1B0GVG6 124 aa9.81□□□□□ -0.84
BRCA1-218ENST00000489037 M0R381 172 aa9.81□□□□□ -0.84
BRCA1-218ENST00000489037 CXCL1P09341 107 aa9.81□□□□□ -0.84
BRCA1-218ENST00000489037 MED14OSP0DP75 135 aa9.81□□□□□ -0.84
BRCA1-218ENST00000489037 BTF3P20290 206 aaKnown RBP9.81□□□□□ -0.84
BRCA1-218ENST00000489037 GNG4P50150 75 aa9.81□□□□□ -0.84
BRCA1-218ENST00000489037 CENPWQ5EE01 88 aa9.81□□□□□ -0.84
BRCA1-218ENST00000489037 BIN3Q9NQY0 253 aa9.81□□□□□ -0.84
BRCA1-218ENST00000489037 BOLA1Q9Y3E2 137 aa9.81□□□□□ -0.84
BRCA1-218ENST00000489037 SMIM12Q96EX1 92 aa9.8□□□□□ -0.84
BRCA1-218ENST00000489037 DERL1Q9BUN8 251 aa9.8□□□□□ -0.84
BRCA1-218ENST00000489037 SCRT2Q9NQ03 307 aa9.8□□□□□ -0.84
BRCA1-218ENST00000489037 DNAH17Q9UFH2 4485 aa9.8□□□□□ -0.84
BRCA1-218ENST00000489037 EVI2AP22794 236 aa9.79□□□□□ -0.84
BRCA1-218ENST00000489037 NKX2-5P52952 324 aaPredicted RBP9.79□□□□□ -0.84
BRCA1-218ENST00000489037 RPL19P84098 196 aaKnown RBP9.79□□□□□ -0.84
BRCA1-218ENST00000489037 FAM74A4Q5TZK3 123 aa9.79□□□□□ -0.84
BRCA1-218ENST00000489037 SFRP2Q96HF1 295 aa9.79□□□□□ -0.84
BRCA1-218ENST00000489037 JPT2Q9H910 190 aa9.79□□□□□ -0.84
BRCA1-218ENST00000489037 LY96Q9Y6Y9 160 aa9.79□□□□□ -0.84
BRCA1-218ENST00000489037 TRAV8-6A0A0B4J262 113 aa9.78□□□□□ -0.84
BRCA1-218ENST00000489037 RAB19A4D1S5 217 aa9.78□□□□□ -0.84
BRCA1-218ENST00000489037 TIRAPP58753 221 aa9.78□□□□□ -0.84
BRCA1-218ENST00000489037 RPS20P60866 119 aaKnown RBP9.78□□□□□ -0.84
BRCA1-218ENST00000489037 SPANXN1Q5VSR9 72 aa9.78□□□□□ -0.84
BRCA1-218ENST00000489037 ATP6V0E2Q8NHE4 81 aa9.78□□□□□ -0.84
BRCA1-218ENST00000489037 DNAH2Q9P225 4427 aa9.78□□□□□ -0.84
BRCA1-218ENST00000489037 XKRY2A2RUG3 117 aa9.77□□□□□ -0.85
BRCA1-218ENST00000489037 K7EP13 123 aa9.77□□□□□ -0.85
BRCA1-218ENST00000489037 SAMD10Q9BYL1 202 aa9.77□□□□□ -0.85
BRCA1-218ENST00000489037 A0A087WWL8 130 aa9.76□□□□□ -0.85
BRCA1-218ENST00000489037 A0A1B0GVY2 172 aa9.76□□□□□ -0.85
BRCA1-218ENST00000489037 GAGE12JA6NER3 117 aa9.76□□□□□ -0.85
BRCA1-218ENST00000489037 RBFOX3A6NFN3 312 aa9.76□□□□□ -0.85
BRCA1-218ENST00000489037 GAGE1Q13065 139 aa9.76□□□□□ -0.85
BRCA1-218ENST00000489037 GAGE4Q13068 117 aa9.76□□□□□ -0.85
BRCA1-218ENST00000489037 GAGE5Q13069 117 aa9.76□□□□□ -0.85
BRCA1-218ENST00000489037 GAGE13Q4V321 117 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms