RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 TMEM241Q24JQ0 296 aa11.12□□□□□ -0.63
C9orf3-219ENST00000488186 SOHLH1Q5JUK2 328 aa11.12□□□□□ -0.63
C9orf3-219ENST00000488186 DNLZQ5SXM8 178 aa11.12□□□□□ -0.63
C9orf3-219ENST00000488186 OR4C5Q8NGB2 326 aa11.12□□□□□ -0.63
C9orf3-219ENST00000488186 FAM210BQ96KR6 192 aa11.12□□□□□ -0.63
C9orf3-219ENST00000488186 C19orf71A6NCJ1 209 aa11.11□□□□□ -0.63
C9orf3-219ENST00000488186 C9JQL5 133 aa11.11□□□□□ -0.63
C9orf3-219ENST00000488186 NUDT10Q8NFP7 164 aa11.11□□□□□ -0.63
C9orf3-219ENST00000488186 NUDT11Q96G61 164 aa11.11□□□□□ -0.63
C9orf3-219ENST00000488186 C18orf15Q96N68 181 aa11.11□□□□□ -0.63
C9orf3-219ENST00000488186 TRGV4A0A0C4DH28 118 aa11.1□□□□□ -0.63
C9orf3-219ENST00000488186 K7EN84 100 aa11.1□□□□□ -0.63
C9orf3-219ENST00000488186 CXCL1P09341 107 aa11.1□□□□□ -0.63
C9orf3-219ENST00000488186 ERVFC1-1P60608 527 aa11.1□□□□□ -0.63
C9orf3-219ENST00000488186 TMEM88Q6PEY1 159 aa11.1□□□□□ -0.63
C9orf3-219ENST00000488186 PTH2Q96A98 100 aa11.1□□□□□ -0.63
C9orf3-219ENST00000488186 RNASE7Q9H1E1 156 aaKnown RBP11.1□□□□□ -0.63
C9orf3-219ENST00000488186 TRAV4A0A0B4J268 109 aa11.09□□□□□ -0.63
C9orf3-219ENST00000488186 GATCO43716 136 aaKnown RBP11.09□□□□□ -0.63
C9orf3-219ENST00000488186 SLAQ13239 276 aa11.09□□□□□ -0.63
C9orf3-219ENST00000488186 ZFP82Q8N141 532 aa11.09□□□□□ -0.63
C9orf3-219ENST00000488186 LYSTQ99698 3801 aa11.09□□□□□ -0.63
C9orf3-219ENST00000488186 TPPP3Q9BW30 176 aa11.09□□□□□ -0.63
C9orf3-219ENST00000488186 RPP21Q9H633 154 aaKnown RBP11.09□□□□□ -0.63
C9orf3-219ENST00000488186 NAT8Q9UHE5 227 aa11.09□□□□□ -0.63
C9orf3-219ENST00000488186 PLECQ15149 4684 aaKnown RBP11.08□□□□□ -0.64
C9orf3-219ENST00000488186 M0R381 172 aa11.08□□□□□ -0.64
C9orf3-219ENST00000488186 SFTA3P0C7M3 94 aa11.08□□□□□ -0.64
C9orf3-219ENST00000488186 MED14OSP0DP75 135 aa11.08□□□□□ -0.64
C9orf3-219ENST00000488186 SPANXN1Q5VSR9 72 aa11.08□□□□□ -0.64
C9orf3-219ENST00000488186 LINC01551Q86U37 167 aa11.08□□□□□ -0.64
C9orf3-219ENST00000488186 TRAV26-1A0A087WT03 109 aa11.07□□□□□ -0.64
C9orf3-219ENST00000488186 A0A0J9YY99 117 aa11.07□□□□□ -0.64
C9orf3-219ENST00000488186 A8MWV9 139 aa11.07□□□□□ -0.64
C9orf3-219ENST00000488186 NUDT3O95989 172 aa11.07□□□□□ -0.64
C9orf3-219ENST00000488186 GZMBP10144 247 aa11.07□□□□□ -0.64
C9orf3-219ENST00000488186 HOXA5P20719 270 aa11.07□□□□□ -0.64
C9orf3-219ENST00000488186 SSTP61278 116 aa11.07□□□□□ -0.64
C9orf3-219ENST00000488186 ADIRFQ15847 76 aa11.07□□□□□ -0.64
C9orf3-219ENST00000488186 PIK3CD-AS1Q5SR53 167 aa11.07□□□□□ -0.64
C9orf3-219ENST00000488186 C15orf54Q8N8G6 183 aa11.07□□□□□ -0.64
C9orf3-219ENST00000488186 C15orf53Q8NAA6 179 aa11.07□□□□□ -0.64
C9orf3-219ENST00000488186 ZNF479Q96JC4 524 aa11.07□□□□□ -0.64
C9orf3-219ENST00000488186 APLNQ9ULZ1 77 aa11.07□□□□□ -0.64
C9orf3-219ENST00000488186 HHLA3Q9XRX5 114 aa11.07□□□□□ -0.64
C9orf3-219ENST00000488186 PAX4O43316 350 aa11.06□□□□□ -0.64
C9orf3-219ENST00000488186 CIDEAO60543 219 aa11.06□□□□□ -0.64
C9orf3-219ENST00000488186 CFAP126Q5VTH2 177 aa11.06□□□□□ -0.64
C9orf3-219ENST00000488186 DMRTA1Q5VZB9 504 aa11.06□□□□□ -0.64
C9orf3-219ENST00000488186 FAM231DQ6ZW35 169 aa11.06□□□□□ -0.64
C9orf3-219ENST00000488186 ZNF575Q86XF7 245 aa11.06□□□□□ -0.64
C9orf3-219ENST00000488186 FER1L6-AS1Q8NA97 138 aa11.06□□□□□ -0.64
C9orf3-219ENST00000488186 SCRT2Q9NQ03 307 aa11.06□□□□□ -0.64
C9orf3-219ENST00000488186 PRO0255Q9UI72 69 aa11.06□□□□□ -0.64
C9orf3-219ENST00000488186 LCE6AA0A183 80 aa11.05□□□□□ -0.64
C9orf3-219ENST00000488186 A0A1W2PPQ1 181 aa11.05□□□□□ -0.64
C9orf3-219ENST00000488186 A8MWL6 223 aa11.05□□□□□ -0.64
C9orf3-219ENST00000488186 RS1O15537 224 aa11.05□□□□□ -0.64
C9orf3-219ENST00000488186 OR5AL1P0C617 328 aa11.05□□□□□ -0.64
C9orf3-219ENST00000488186 RPL23P62829 140 aaKnown RBP11.05□□□□□ -0.64
C9orf3-219ENST00000488186 UQCC3Q6UW78 93 aa11.05□□□□□ -0.64
C9orf3-219ENST00000488186 SACSQ9NZJ4 4579 aa11.05□□□□□ -0.64
C9orf3-219ENST00000488186 IGHV3-73A0A0B4J1V6 119 aa11.04□□□□□ -0.64
C9orf3-219ENST00000488186 MUC21A0A0G2JKD1 596 aa11.04□□□□□ -0.64
C9orf3-219ENST00000488186 MUC21A0A140T8X8 626 aa11.04□□□□□ -0.64
C9orf3-219ENST00000488186 F2Z2F3 143 aa11.04□□□□□ -0.64
C9orf3-219ENST00000488186 SNAI2O43623 268 aa11.04□□□□□ -0.64
C9orf3-219ENST00000488186 FHL2Q14192 279 aa11.04□□□□□ -0.64
C9orf3-219ENST00000488186 COMMD7Q86VX2 200 aa11.04□□□□□ -0.64
C9orf3-219ENST00000488186 POM121L12Q8N7R1 296 aa11.04□□□□□ -0.64
C9orf3-219ENST00000488186 SSBP4Q9BWG4 385 aaPredicted RBP11.04□□□□□ -0.64
C9orf3-219ENST00000488186 OSTCQ9NRP0 149 aa11.04□□□□□ -0.64
C9orf3-219ENST00000488186 LY6G6CO95867 125 aa11.03□□□□□ -0.64
C9orf3-219ENST00000488186 CACNG7P62955 275 aa11.03□□□□□ -0.64
C9orf3-219ENST00000488186 LYZL1Q6UWQ5 148 aa11.03□□□□□ -0.64
C9orf3-219ENST00000488186 OR10AG1Q8NH19 301 aa11.03□□□□□ -0.64
C9orf3-219ENST00000488186 SFRP2Q96HF1 295 aa11.03□□□□□ -0.64
C9orf3-219ENST00000488186 MUC4Q99102 2169 aa11.03□□□□□ -0.64
C9orf3-219ENST00000488186 H3BNG1 76 aa11.02□□□□□ -0.65
C9orf3-219ENST00000488186 SMIM17P0DL12 118 aa11.02□□□□□ -0.65
C9orf3-219ENST00000488186 CRYBA4P53673 196 aa11.02□□□□□ -0.65
C9orf3-219ENST00000488186 FAM74A4Q5TZK3 123 aa11.02□□□□□ -0.65
C9orf3-219ENST00000488186 OR10G8Q8NGN5 311 aa11.02□□□□□ -0.65
C9orf3-219ENST00000488186 ISOC2Q96AB3 205 aa11.02□□□□□ -0.65
C9orf3-219ENST00000488186 JPT2Q9H910 190 aa11.02□□□□□ -0.65
C9orf3-219ENST00000488186 DNAH1Q9P2D7 4330 aa11.02□□□□□ -0.65
C9orf3-219ENST00000488186 A0A087WWL8 130 aa11.01□□□□□ -0.65
C9orf3-219ENST00000488186 RHODO00212 210 aa11.01□□□□□ -0.65
C9orf3-219ENST00000488186 IGLC6P0CF74 106 aa11.01□□□□□ -0.65
C9orf3-219ENST00000488186 P0DMU3 169 aa11.01□□□□□ -0.65
C9orf3-219ENST00000488186 FAM231AP0DMU4 169 aa11.01□□□□□ -0.65
C9orf3-219ENST00000488186 FAM231CP0DMU5 169 aa11.01□□□□□ -0.65
C9orf3-219ENST00000488186 CT83Q5H943 113 aa11.01□□□□□ -0.65
C9orf3-219ENST00000488186 ZFP2Q6ZN57 461 aa11.01□□□□□ -0.65
C9orf3-219ENST00000488186 UBE2DNLQ8IWF7 75 aa11.01□□□□□ -0.65
C9orf3-219ENST00000488186 BORCS7Q96B45 105 aa11.01□□□□□ -0.65
C9orf3-219ENST00000488186 PRADC1Q9BSG0 188 aa11.01□□□□□ -0.65
C9orf3-219ENST00000488186 ICOSQ9Y6W8 199 aa11.01□□□□□ -0.65
C9orf3-219ENST00000488186 LINC00862A6NCI5 91 aa11□□□□□ -0.65
C9orf3-219ENST00000488186 GATA1P15976 413 aaPredicted RBP11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms