RNA–Protein interactions for RNA: ENST00000486941.1

SNRNP40-205, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-205ENST00000486941 C10orf126Q8N4M7 172 aa2.63□□□□□ -1.99
SNRNP40-205ENST00000486941 OR10G8Q8NGN5 311 aa2.63□□□□□ -1.99
SNRNP40-205ENST00000486941 PFDN5Q99471 154 aa2.63□□□□□ -1.99
SNRNP40-205ENST00000486941 TMEM70Q9BUB7 260 aa2.63□□□□□ -1.99
SNRNP40-205ENST00000486941 MRPL32Q9BYC8 188 aaKnown RBP2.63□□□□□ -1.99
SNRNP40-205ENST00000486941 C20orf85Q9H1P6 137 aa2.63□□□□□ -1.99
SNRNP40-205ENST00000486941 GSKIPQ9P0R6 139 aa2.63□□□□□ -1.99
SNRNP40-205ENST00000486941 TMEM14CQ9P0S9 112 aa2.63□□□□□ -1.99
SNRNP40-205ENST00000486941 RCL1Q9Y2P8 373 aaKnown RBP2.63□□□□□ -1.99
SNRNP40-205ENST00000486941 KLF12Q9Y4X4 402 aa2.63□□□□□ -1.99
SNRNP40-205ENST00000486941 V9GYH0 126 aa2.63□□□□□ -1.99
SNRNP40-205ENST00000486941 MYCBP2O75592 4640 aa2.63□□□□□ -1.99
SNRNP40-205ENST00000486941 IGHV1OR15-1A0A075B7D0 117 aa2.62□□□□□ -1.99
SNRNP40-205ENST00000486941 TRGV4A0A0C4DH28 118 aa2.62□□□□□ -1.99
SNRNP40-205ENST00000486941 LRCOL1A6NCL2 159 aa2.62□□□□□ -1.99
SNRNP40-205ENST00000486941 E5RGE8 158 aa2.62□□□□□ -1.99
SNRNP40-205ENST00000486941 K7EQD1 137 aa2.62□□□□□ -1.99
SNRNP40-205ENST00000486941 L7N2F9 121 aa2.62□□□□□ -1.99
SNRNP40-205ENST00000486941 M0R3E3 92 aa2.62□□□□□ -1.99
SNRNP40-205ENST00000486941 NOL3O60936 208 aaKnown RBP2.62□□□□□ -1.99
SNRNP40-205ENST00000486941 IGHV3-53P01767 116 aa2.62□□□□□ -1.99
SNRNP40-205ENST00000486941 C1QBP02746 253 aa2.62□□□□□ -1.99
SNRNP40-205ENST00000486941 ORM1P02763 201 aa2.62□□□□□ -1.99
SNRNP40-205ENST00000486941 SRIP30626 198 aa2.62□□□□□ -1.99
SNRNP40-205ENST00000486941 ZNF415Q09FC8 603 aa2.62□□□□□ -1.99
SNRNP40-205ENST00000486941 BTN1A1Q13410 526 aa2.62□□□□□ -1.99
SNRNP40-205ENST00000486941 VWC2Q2TAL6 325 aa2.62□□□□□ -1.99
SNRNP40-205ENST00000486941 TMEM78Q5T7P6 136 aa2.62□□□□□ -1.99
SNRNP40-205ENST00000486941 ZFAND2AQ8N6M9 145 aa2.62□□□□□ -1.99
SNRNP40-205ENST00000486941 OR10G4Q8NGN3 311 aa2.62□□□□□ -1.99
SNRNP40-205ENST00000486941 MITD1Q8WV92 249 aa2.62□□□□□ -1.99
SNRNP40-205ENST00000486941 SPXQ9BT56 116 aa2.62□□□□□ -1.99
SNRNP40-205ENST00000486941 SRRQ9GZT4 340 aa2.62□□□□□ -1.99
SNRNP40-205ENST00000486941 SLC39A9Q9NUM3 307 aa2.62□□□□□ -1.99
SNRNP40-205ENST00000486941 UQCC1Q9NVA1 299 aa2.62□□□□□ -1.99
SNRNP40-205ENST00000486941 MRPL16Q9NX20 251 aaKnown RBP2.62□□□□□ -1.99
SNRNP40-205ENST00000486941 ZNF492Q9P255 531 aa2.62□□□□□ -1.99
SNRNP40-205ENST00000486941 PRO0461Q9UI25 63 aa2.62□□□□□ -1.99
SNRNP40-205ENST00000486941 FLVCR2Q9UPI3 526 aa2.62□□□□□ -1.99
SNRNP40-205ENST00000486941 WDR83OSQ9Y284 106 aa2.62□□□□□ -1.99
SNRNP40-205ENST00000486941 TIMM9Q9Y5J7 89 aa2.62□□□□□ -1.99
SNRNP40-205ENST00000486941 RBAKDNA6NC62 111 aa2.61□□□□□ -1.99
SNRNP40-205ENST00000486941 FAM24AA6NFZ4 105 aa2.61□□□□□ -1.99
SNRNP40-205ENST00000486941 CENPXA8MT69 81 aa2.61□□□□□ -1.99
SNRNP40-205ENST00000486941 FAM25EA8MYX2 175 aa2.61□□□□□ -1.99
SNRNP40-205ENST00000486941 PSCAO43653 123 aa2.61□□□□□ -1.99
SNRNP40-205ENST00000486941 CST7O76096 145 aa2.61□□□□□ -1.99
SNRNP40-205ENST00000486941 CRYGDP07320 174 aa2.61□□□□□ -1.99
SNRNP40-205ENST00000486941 NBEAP1P0C6P0 100 aa2.61□□□□□ -1.99
SNRNP40-205ENST00000486941 PYYP10082 97 aa2.61□□□□□ -1.99
SNRNP40-205ENST00000486941 S100A1P23297 94 aa2.61□□□□□ -1.99
SNRNP40-205ENST00000486941 S100A11P31949 105 aa2.61□□□□□ -1.99
SNRNP40-205ENST00000486941 INPP1P49441 399 aa2.61□□□□□ -1.99
SNRNP40-205ENST00000486941 SULT1A1P50225 295 aa2.61□□□□□ -1.99
SNRNP40-205ENST00000486941 BCAP31P51572 246 aa2.61□□□□□ -1.99
SNRNP40-205ENST00000486941 CAV2P51636 162 aa2.61□□□□□ -1.99
SNRNP40-205ENST00000486941 ZNF138P52744 262 aa2.61□□□□□ -1.99
SNRNP40-205ENST00000486941 ZNF266Q14584 549 aa2.61□□□□□ -1.99
SNRNP40-205ENST00000486941 ZNF846Q147U1 533 aa2.61□□□□□ -1.99
SNRNP40-205ENST00000486941 ATP6V1FQ16864 119 aa2.61□□□□□ -1.99
SNRNP40-205ENST00000486941 SPANXN2Q5MJ10 180 aa2.61□□□□□ -1.99
SNRNP40-205ENST00000486941 PRR9Q5T870 116 aa2.61□□□□□ -1.99
SNRNP40-205ENST00000486941 Q6ZQT7 251 aa2.61□□□□□ -1.99
SNRNP40-205ENST00000486941 WFDC10BQ8IUB3 73 aa2.61□□□□□ -1.99
SNRNP40-205ENST00000486941 EXOC3-AS1Q8N2X6 119 aa2.61□□□□□ -1.99
SNRNP40-205ENST00000486941 BLNKQ8WV28 456 aa2.61□□□□□ -1.99
SNRNP40-205ENST00000486941 PCNPQ8WW12 178 aaKnown RBP2.61□□□□□ -1.99
SNRNP40-205ENST00000486941 TXNDC17Q9BRA2 123 aa2.61□□□□□ -1.99
SNRNP40-205ENST00000486941 C11orf1Q9H5F2 150 aa2.61□□□□□ -1.99
SNRNP40-205ENST00000486941 GPN1Q9HCN4 374 aaPredicted RBP2.61□□□□□ -1.99
SNRNP40-205ENST00000486941 IGKV2-40A0A087WW87 121 aaPredicted RBP2.6□□□□□ -1.99
SNRNP40-205ENST00000486941 TRAV4A0A0B4J268 109 aa2.6□□□□□ -1.99
SNRNP40-205ENST00000486941 IGHV3-38A0A0C4DH36 116 aa2.6□□□□□ -1.99
SNRNP40-205ENST00000486941 C5orf51A6NDU8 294 aa2.6□□□□□ -1.99
SNRNP40-205ENST00000486941 IBA57-AS1B1ANH7 110 aa2.6□□□□□ -1.99
SNRNP40-205ENST00000486941 C9JCJ5 164 aa2.6□□□□□ -1.99
SNRNP40-205ENST00000486941 SCGB1D1O95968 90 aa2.6□□□□□ -1.99
SNRNP40-205ENST00000486941 IGKV2D-40P01614 121 aaPredicted RBP2.6□□□□□ -1.99
SNRNP40-205ENST00000486941 PFN1P07737 140 aaKnown RBP2.6□□□□□ -1.99
SNRNP40-205ENST00000486941 SFTA3P0C7M3 94 aa2.6□□□□□ -1.99
SNRNP40-205ENST00000486941 PVALBP20472 110 aaPredicted RBP2.6□□□□□ -1.99
SNRNP40-205ENST00000486941 BTCP35070 178 aa2.6□□□□□ -1.99
SNRNP40-205ENST00000486941 CSN1S1P47710 185 aa2.6□□□□□ -1.99
SNRNP40-205ENST00000486941 SNRPEP62304 92 aaKnown RBP2.6□□□□□ -1.99
SNRNP40-205ENST00000486941 HBG1P69891 147 aa2.6□□□□□ -1.99
SNRNP40-205ENST00000486941 HBG2P69892 147 aa2.6□□□□□ -1.99
SNRNP40-205ENST00000486941 HAMPP81172 84 aa2.6□□□□□ -1.99
SNRNP40-205ENST00000486941 IFITM2Q01629 132 aa2.6□□□□□ -1.99
SNRNP40-205ENST00000486941 BAXQ07812 192 aa2.6□□□□□ -1.99
SNRNP40-205ENST00000486941 IL15RAQ13261 267 aa2.6□□□□□ -1.99
SNRNP40-205ENST00000486941 TDRG1Q3Y452 100 aa2.6□□□□□ -1.99
SNRNP40-205ENST00000486941 LINC01556Q5JQF7 62 aa2.6□□□□□ -1.99
SNRNP40-205ENST00000486941 TRIQKQ629K1 86 aa2.6□□□□□ -1.99
SNRNP40-205ENST00000486941 Q6AWC8 147 aa2.6□□□□□ -1.99
SNRNP40-205ENST00000486941 FAM159AQ6UWV7 190 aa2.6□□□□□ -1.99
SNRNP40-205ENST00000486941 STX12Q86Y82 276 aa2.6□□□□□ -1.99
SNRNP40-205ENST00000486941 TMEM252Q8N6L7 170 aa2.6□□□□□ -1.99
SNRNP40-205ENST00000486941 ARL6IP6Q8N6S5 226 aa2.6□□□□□ -1.99
SNRNP40-205ENST00000486941 Q8N814 137 aa2.6□□□□□ -1.99
SNRNP40-205ENST00000486941 OR4C5Q8NGB2 326 aa2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 920.6 ms