RNA–Protein interactions for RNA: ENST00000486210.1

MCF2L-226, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 548 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-226ENST00000486210 SFTA3P0C7M3 94 aa12.42□□□□□ -0.42
MCF2L-226ENST00000486210 HTN3P15516 51 aa12.42□□□□□ -0.42
MCF2L-226ENST00000486210 RPL19P84098 196 aaKnown RBP12.42□□□□□ -0.42
MCF2L-226ENST00000486210 ZNF493Q6ZR52 646 aa12.42□□□□□ -0.42
MCF2L-226ENST00000486210 SDF2L1Q9HCN8 221 aa12.42□□□□□ -0.42
MCF2L-226ENST00000486210 DKK2Q9UBU2 259 aa12.42□□□□□ -0.42
MCF2L-226ENST00000486210 IGLV2-18A0A075B6J9 118 aa12.41□□□□□ -0.42
MCF2L-226ENST00000486210 TRGV11A0A075B6L2 103 aa12.41□□□□□ -0.42
MCF2L-226ENST00000486210 TMSB15BA0A087X1C1 80 aa12.41□□□□□ -0.42
MCF2L-226ENST00000486210 B4DEV8 164 aa12.41□□□□□ -0.42
MCF2L-226ENST00000486210 LINC01559Q495D7 138 aa12.41□□□□□ -0.42
MCF2L-226ENST00000486210 FAM74A3Q4VXF1 159 aa12.41□□□□□ -0.42
MCF2L-226ENST00000486210 SOHLH1Q5JUK2 328 aa12.41□□□□□ -0.42
MCF2L-226ENST00000486210 KCNS1Q96KK3 526 aa12.41□□□□□ -0.42
MCF2L-226ENST00000486210 NOP10Q9NPE3 64 aaKnown RBP12.41□□□□□ -0.42
MCF2L-226ENST00000486210 LY96Q9Y6Y9 160 aa12.41□□□□□ -0.42
MCF2L-226ENST00000486210 NACAE9PAV3 2078 aa12.41□□□□□ -0.42
MCF2L-226ENST00000486210 GRIFINA4D1Z8 144 aa12.4□□□□□ -0.42
MCF2L-226ENST00000486210 DAD1P61803 113 aa12.4□□□□□ -0.42
MCF2L-226ENST00000486210 TMEM241Q24JQ0 296 aa12.4□□□□□ -0.42
MCF2L-226ENST00000486210 IBA57Q5T440 356 aaKnown RBP12.4□□□□□ -0.42
MCF2L-226ENST00000486210 UQCC3Q6UW78 93 aa12.4□□□□□ -0.42
MCF2L-226ENST00000486210 LINC01551Q86U37 167 aa12.4□□□□□ -0.42
MCF2L-226ENST00000486210 APOBP04114 4563 aaKnown RBP12.4□□□□□ -0.42
MCF2L-226ENST00000486210 TCL1AP56279 114 aa12.39□□□□□ -0.43
MCF2L-226ENST00000486210 RPL23P62829 140 aaKnown RBP12.39□□□□□ -0.43
MCF2L-226ENST00000486210 ZNF415Q09FC8 603 aa12.39□□□□□ -0.43
MCF2L-226ENST00000486210 NUDT10Q8NFP7 164 aa12.39□□□□□ -0.43
MCF2L-226ENST00000486210 NUDT11Q96G61 164 aa12.39□□□□□ -0.43
MCF2L-226ENST00000486210 RNASE7Q9H1E1 156 aaKnown RBP12.39□□□□□ -0.43
MCF2L-226ENST00000486210 NAT8Q9UHE5 227 aa12.39□□□□□ -0.43
MCF2L-226ENST00000486210 TIMM8BQ9Y5J9 83 aaPredicted RBP12.39□□□□□ -0.43
MCF2L-226ENST00000486210 SNURFLB1AK76 121 aa12.38□□□□□ -0.43
MCF2L-226ENST00000486210 RNASE3P12724 160 aaKnown RBP12.38□□□□□ -0.43
MCF2L-226ENST00000486210 DAZAP1Q96EP5 407 aaKnown RBP12.38□□□□□ -0.43
MCF2L-226ENST00000486210 BIN3Q9NQY0 253 aa12.38□□□□□ -0.43
MCF2L-226ENST00000486210 TMEM218A2RU14 115 aa12.37□□□□□ -0.43
MCF2L-226ENST00000486210 ADCYAP1P18509 176 aa12.37□□□□□ -0.43
MCF2L-226ENST00000486210 DAZ2Q13117 558 aaKnown RBP12.37□□□□□ -0.43
MCF2L-226ENST00000486210 LYRM9A8MSI8 78 aa12.36□□□□□ -0.43
MCF2L-226ENST00000486210 P01737 135 aa12.36□□□□□ -0.43
MCF2L-226ENST00000486210 ADIRFQ15847 76 aa12.36□□□□□ -0.43
MCF2L-226ENST00000486210 OR2D3Q8NGH3 330 aa12.36□□□□□ -0.43
MCF2L-226ENST00000486210 C9orf85Q96MD7 179 aa12.36□□□□□ -0.43
MCF2L-226ENST00000486210 DNAH5Q8TE73 4624 aa12.36□□□□□ -0.43
MCF2L-226ENST00000486210 SPINK4O60575 86 aa12.35□□□□□ -0.43
MCF2L-226ENST00000486210 GZMBP10144 247 aa12.35□□□□□ -0.43
MCF2L-226ENST00000486210 ASIPP42127 132 aa12.35□□□□□ -0.43
MCF2L-226ENST00000486210 RNF212Q495C1 297 aa12.35□□□□□ -0.43
MCF2L-226ENST00000486210 DNLZQ5SXM8 178 aa12.35□□□□□ -0.43
MCF2L-226ENST00000486210 Q6ZTI0 123 aa12.35□□□□□ -0.43
MCF2L-226ENST00000486210 C15orf53Q8NAA6 179 aa12.35□□□□□ -0.43
MCF2L-226ENST00000486210 ISOC2Q96AB3 205 aa12.35□□□□□ -0.43
MCF2L-226ENST00000486210 MRPL16Q9NX20 251 aaKnown RBP12.35□□□□□ -0.43
MCF2L-226ENST00000486210 HERC1Q15751 4861 aa12.34□□□□□ -0.43
MCF2L-226ENST00000486210 GAGE12BA1L429 117 aa12.34□□□□□ -0.43
MCF2L-226ENST00000486210 H3BVH4 76 aa12.34□□□□□ -0.43
MCF2L-226ENST00000486210 GAGE7O76087 117 aa12.34□□□□□ -0.43
MCF2L-226ENST00000486210 ARMS2P0C7Q2 107 aa12.34□□□□□ -0.43
MCF2L-226ENST00000486210 GAGE12FP0CL80 117 aa12.34□□□□□ -0.43
MCF2L-226ENST00000486210 GAGE12GP0CL81 117 aa12.34□□□□□ -0.43
MCF2L-226ENST00000486210 GAGE12IP0CL82 117 aa12.34□□□□□ -0.43
MCF2L-226ENST00000486210 DEFB130BP0DP73 79 aa12.34□□□□□ -0.43
MCF2L-226ENST00000486210 DEFB130AP0DP74 79 aa12.34□□□□□ -0.43
MCF2L-226ENST00000486210 S100A4P26447 101 aaKnown RBP12.34□□□□□ -0.43
MCF2L-226ENST00000486210 TMEM88Q6PEY1 159 aa12.34□□□□□ -0.43
MCF2L-226ENST00000486210 FAM231DQ6ZW35 169 aa12.34□□□□□ -0.43
MCF2L-226ENST00000486210 LINC00612Q8N6U2 182 aa12.34□□□□□ -0.43
MCF2L-226ENST00000486210 TRGV1A0A0A0MS02 117 aa12.33□□□□□ -0.44
MCF2L-226ENST00000486210 CDK2AP2O75956 126 aa12.33□□□□□ -0.44
MCF2L-226ENST00000486210 CXCL1P09341 107 aa12.33□□□□□ -0.44
MCF2L-226ENST00000486210 ERVFC1-1P60608 527 aa12.33□□□□□ -0.44
MCF2L-226ENST00000486210 MAPKAPK5-AS1Q8N8E1 139 aa12.33□□□□□ -0.44
MCF2L-226ENST00000486210 SPXQ9BT56 116 aa12.33□□□□□ -0.44
MCF2L-226ENST00000486210 RPP21Q9H633 154 aaKnown RBP12.33□□□□□ -0.44
MCF2L-226ENST00000486210 F8W036 122 aa12.32□□□□□ -0.44
MCF2L-226ENST00000486210 GATCO43716 136 aaKnown RBP12.32□□□□□ -0.44
MCF2L-226ENST00000486210 C1orf134Q5TEV5 83 aa12.32□□□□□ -0.44
MCF2L-226ENST00000486210 SCRT2Q9NQ03 307 aa12.32□□□□□ -0.44
MCF2L-226ENST00000486210 IL36BQ9NZH7 164 aa12.32□□□□□ -0.44
MCF2L-226ENST00000486210 M0R2P5 195 aa12.31□□□□□ -0.44
MCF2L-226ENST00000486210 FAM3BP58499 235 aaPredicted RBP12.31□□□□□ -0.44
MCF2L-226ENST00000486210 RPS20P60866 119 aaKnown RBP12.31□□□□□ -0.44
MCF2L-226ENST00000486210 TNP2Q05952 138 aa12.31□□□□□ -0.44
MCF2L-226ENST00000486210 SLC7A5P1Q8MH63 180 aa12.31□□□□□ -0.44
MCF2L-226ENST00000486210 SFRP2Q96HF1 295 aa12.31□□□□□ -0.44
MCF2L-226ENST00000486210 OSTCQ9NRP0 149 aa12.31□□□□□ -0.44
MCF2L-226ENST00000486210 C16orf90A8MZG2 172 aa12.3□□□□□ -0.44
MCF2L-226ENST00000486210 IGLC6P0CF74 106 aa12.3□□□□□ -0.44
MCF2L-226ENST00000486210 RASL10AQ92737 203 aa12.3□□□□□ -0.44
MCF2L-226ENST00000486210 SEC11CQ9BY50 192 aa12.3□□□□□ -0.44
MCF2L-226ENST00000486210 V9GYV3 84 aa12.3□□□□□ -0.44
MCF2L-226ENST00000486210 MUC21A0A0G2JKD1 596 aa12.29□□□□□ -0.44
MCF2L-226ENST00000486210 MUC21A0A140T8X8 626 aa12.29□□□□□ -0.44
MCF2L-226ENST00000486210 SNAI2O43623 268 aa12.29□□□□□ -0.44
MCF2L-226ENST00000486210 OR10G8Q8NGN5 311 aa12.29□□□□□ -0.44
MCF2L-226ENST00000486210 SSBP4Q9BWG4 385 aaPredicted RBP12.29□□□□□ -0.44
MCF2L-226ENST00000486210 F5H768 121 aa12.28□□□□□ -0.44
MCF2L-226ENST00000486210 ZNF876PQ49A33 203 aa12.28□□□□□ -0.44
MCF2L-226ENST00000486210 C10orf91Q5T1B1 145 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms