RNA–Protein interactions for RNA: ENST00000484799.1

SMC4-215, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-215ENST00000484799 CCDC58Q4VC31 144 aa0.97□□□□□ -2.25
SMC4-215ENST00000484799 ERG28Q9UKR5 140 aa0.97□□□□□ -2.25
SMC4-215ENST00000484799 SOGA1O94964 1423 aa0.97□□□□□ -2.25
SMC4-215ENST00000484799 TRAV17A0A0B4J275 112 aa0.96□□□□□ -2.26
SMC4-215ENST00000484799 TEX49A0A1B0GTD5 131 aa0.96□□□□□ -2.26
SMC4-215ENST00000484799 FAM236AA0A1B0GUQ0 79 aa0.96□□□□□ -2.26
SMC4-215ENST00000484799 FAM236BA0A1B0GV22 79 aa0.96□□□□□ -2.26
SMC4-215ENST00000484799 CCKP06307 115 aa0.96□□□□□ -2.26
SMC4-215ENST00000484799 FXYD3Q14802 87 aa0.96□□□□□ -2.26
SMC4-215ENST00000484799 SCIMPQ6UWF3 145 aa0.96□□□□□ -2.26
SMC4-215ENST00000484799 Q86TA4 180 aa0.96□□□□□ -2.26
SMC4-215ENST00000484799 PPP1R1CQ8WVI7 109 aa0.96□□□□□ -2.26
SMC4-215ENST00000484799 PLXNA2O75051 1894 aa0.96□□□□□ -2.26
SMC4-215ENST00000484799 MUC16Q8WXI7 14507 aa0.95□□□□□ -2.26
SMC4-215ENST00000484799 ERCC6Q03468 1493 aa0.95□□□□□ -2.26
SMC4-215ENST00000484799 CXorf51AA0A1B0GTR3 108 aa0.95□□□□□ -2.26
SMC4-215ENST00000484799 K7EIL1 84 aa0.95□□□□□ -2.26
SMC4-215ENST00000484799 NPFFO15130 113 aa0.95□□□□□ -2.26
SMC4-215ENST00000484799 COPZ1P61923 177 aa0.95□□□□□ -2.26
SMC4-215ENST00000484799 RPS25P62851 125 aaKnown RBP0.95□□□□□ -2.26
SMC4-215ENST00000484799 IQCJQ1A5X6 159 aa0.95□□□□□ -2.26
SMC4-215ENST00000484799 VSTM2AQ8TAG5 236 aa0.95□□□□□ -2.26
SMC4-215ENST00000484799 TSC22D3Q99576 134 aa0.95□□□□□ -2.26
SMC4-215ENST00000484799 TMEM191AQ9H0A3 160 aa0.95□□□□□ -2.26
SMC4-215ENST00000484799 BLMP54132 1417 aaPredicted RBP0.95□□□□□ -2.26
SMC4-215ENST00000484799 DLEC1Q9Y238 1755 aa0.95□□□□□ -2.26
SMC4-215ENST00000484799 CPDO75976 1380 aa0.95□□□□□ -2.26
SMC4-215ENST00000484799 ASH1LQ9NR48 2969 aaKnown RBP0.94□□□□□ -2.26
SMC4-215ENST00000484799 ZCCHC6Q5VYS8 1495 aaKnown RBP0.94□□□□□ -2.26
SMC4-215ENST00000484799 NBDYA0A0U1RRE5 68 aa0.94□□□□□ -2.26
SMC4-215ENST00000484799 LOC101927531A0A1B0GV80 90 aa0.94□□□□□ -2.26
SMC4-215ENST00000484799 ZNF670-ZNF695F2Z2N8 137 aa0.94□□□□□ -2.26
SMC4-215ENST00000484799 SPINK13Q1W4C9 94 aa0.94□□□□□ -2.26
SMC4-215ENST00000484799 C5orf56Q8N8D9 126 aa0.94□□□□□ -2.26
SMC4-215ENST00000484799 KNTC1P50748 2209 aa0.94□□□□□ -2.26
SMC4-215ENST00000484799 ADGRB1O14514 1584 aa0.94□□□□□ -2.26
SMC4-215ENST00000484799 MYH6P13533 1939 aa0.93□□□□□ -2.26
SMC4-215ENST00000484799 MYOM3Q5VTT5 1437 aa0.93□□□□□ -2.26
SMC4-215ENST00000484799 GUCA1AP43080 201 aaPredicted RBP0.93□□□□□ -2.26
SMC4-215ENST00000484799 RRAS2P62070 204 aaPredicted RBP0.93□□□□□ -2.26
SMC4-215ENST00000484799 PSMG3Q9BT73 122 aaPredicted RBP0.93□□□□□ -2.26
SMC4-215ENST00000484799 FAM107BQ9H098 131 aa0.93□□□□□ -2.26
SMC4-215ENST00000484799 AFDNP55196 1824 aaKnown RBP0.93□□□□□ -2.26
SMC4-215ENST00000484799 CASZ1Q86V15 1759 aa0.93□□□□□ -2.26
SMC4-215ENST00000484799 BICRAQ9NZM4 1560 aa0.92□□□□□ -2.26
SMC4-215ENST00000484799 KIAA0100Q14667 2235 aaKnown RBP0.92□□□□□ -2.26
SMC4-215ENST00000484799 ZNF142P52746 1687 aaPredicted RBP0.92□□□□□ -2.26
SMC4-215ENST00000484799 RREB1Q92766 1687 aa0.92□□□□□ -2.26
SMC4-215ENST00000484799 PYYP10082 97 aa0.92□□□□□ -2.26
SMC4-215ENST00000484799 KLKP1Q107X0 134 aa0.92□□□□□ -2.26
SMC4-215ENST00000484799 SPINK9Q5DT21 86 aa0.92□□□□□ -2.26
SMC4-215ENST00000484799 SPANXN1Q5VSR9 72 aa0.92□□□□□ -2.26
SMC4-215ENST00000484799 LINC01545Q5VT33 79 aa0.92□□□□□ -2.26
SMC4-215ENST00000484799 LINC00208Q96KT6 92 aa0.92□□□□□ -2.26
SMC4-215ENST00000484799 CCDC167Q9P0B6 97 aa0.92□□□□□ -2.26
SMC4-215ENST00000484799 TMEM2Q9UHN6 1383 aa0.92□□□□□ -2.26
SMC4-215ENST00000484799 GRIN2AQ12879 1464 aa0.92□□□□□ -2.26
SMC4-215ENST00000484799 TRAV12-2A0A075B6T6 113 aa0.91□□□□□ -2.26
SMC4-215ENST00000484799 NDUFA2O43678 99 aa0.91□□□□□ -2.26
SMC4-215ENST00000484799 SLC25A6P12236 298 aa0.91□□□□□ -2.26
SMC4-215ENST00000484799 SELENOWP63302 87 aa0.91□□□□□ -2.26
SMC4-215ENST00000484799 SPCS2Q15005 226 aa0.91□□□□□ -2.26
SMC4-215ENST00000484799 Q6ZUT4 128 aa0.91□□□□□ -2.26
SMC4-215ENST00000484799 PLAC4Q8WY50 150 aa0.91□□□□□ -2.26
SMC4-215ENST00000484799 COA4Q9NYJ1 87 aa0.91□□□□□ -2.26
SMC4-215ENST00000484799 TCRBV3S1A0A5B6 114 aa0.9□□□□□ -2.27
SMC4-215ENST00000484799 FXYD1O00168 92 aa0.9□□□□□ -2.27
SMC4-215ENST00000484799 ZNF56Q15929 161 aa0.9□□□□□ -2.27
SMC4-215ENST00000484799 MIC13Q5XKP0 118 aa0.9□□□□□ -2.27
SMC4-215ENST00000484799 C1orf54Q8WWF1 131 aa0.9□□□□□ -2.27
SMC4-215ENST00000484799 ARL11Q969Q4 196 aa0.9□□□□□ -2.27
SMC4-215ENST00000484799 DAPK1P53355 1430 aa0.89□□□□□ -2.27
SMC4-215ENST00000484799 BCORL1Q5H9F3 1711 aa0.89□□□□□ -2.27
SMC4-215ENST00000484799 ESPL1Q14674 2120 aa0.89□□□□□ -2.27
SMC4-215ENST00000484799 ABCA4P78363 2273 aa0.89□□□□□ -2.27
SMC4-215ENST00000484799 PTPRMP28827 1452 aa0.89□□□□□ -2.27
SMC4-215ENST00000484799 EFCAB10A6NFE3 127 aa0.89□□□□□ -2.27
SMC4-215ENST00000484799 K7EP13 123 aa0.89□□□□□ -2.27
SMC4-215ENST00000484799 SPINT3P49223 89 aa0.89□□□□□ -2.27
SMC4-215ENST00000484799 OR2T2Q6IF00 324 aa0.89□□□□□ -2.27
SMC4-215ENST00000484799 CYP2G1PQ6ZSU1 146 aa0.89□□□□□ -2.27
SMC4-215ENST00000484799 KCNRGQ8N5I3 272 aa0.89□□□□□ -2.27
SMC4-215ENST00000484799 TMEM141Q96I45 108 aa0.89□□□□□ -2.27
SMC4-215ENST00000484799 TMEM14BQ9NUH8 114 aa0.89□□□□□ -2.27
SMC4-215ENST00000484799 BET1LQ9NYM9 111 aa0.89□□□□□ -2.27
SMC4-215ENST00000484799 NDUFA12Q9UI09 145 aa0.89□□□□□ -2.27
SMC4-215ENST00000484799 AKAP11Q9UKA4 1901 aa0.89□□□□□ -2.27
SMC4-215ENST00000484799 KIF13AQ9H1H9 1805 aa0.89□□□□□ -2.27
SMC4-215ENST00000484799 MCRIP1C9JLW8 97 aa0.88□□□□□ -2.27
SMC4-215ENST00000484799 M0R129 80 aa0.88□□□□□ -2.27
SMC4-215ENST00000484799 PIRTP0C851 137 aa0.88□□□□□ -2.27
SMC4-215ENST00000484799 PRB4P10163 310 aaPredicted RBP0.88□□□□□ -2.27
SMC4-215ENST00000484799 PIPP12273 146 aaPredicted RBP0.88□□□□□ -2.27
SMC4-215ENST00000484799 PRB3Q04118 309 aaPredicted RBP0.88□□□□□ -2.27
SMC4-215ENST00000484799 COPS9Q8WXC6 57 aa0.88□□□□□ -2.27
SMC4-215ENST00000484799 SDF2Q99470 211 aa0.88□□□□□ -2.27
SMC4-215ENST00000484799 LAMB1P07942 1786 aa0.88□□□□□ -2.27
SMC4-215ENST00000484799 PITX3O75364 302 aa0.87□□□□□ -2.27
SMC4-215ENST00000484799 ZNF137PP52743 207 aa0.87□□□□□ -2.27
SMC4-215ENST00000484799 EMX2Q04743 252 aa0.87□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms