RNA–Protein interactions for RNA: ENST00000480057.1

VTI1A-204, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-204ENST00000480057 D6R8Y8 96 aa8.11□□□□□ -1.11
VTI1A-204ENST00000480057 HSBP1O75506 76 aa8.11□□□□□ -1.11
VTI1A-204ENST00000480057 INSP01308 110 aa8.11□□□□□ -1.11
VTI1A-204ENST00000480057 CD7P09564 240 aa8.11□□□□□ -1.11
VTI1A-204ENST00000480057 CKS2P33552 79 aa8.11□□□□□ -1.11
VTI1A-204ENST00000480057 NUTF2P61970 127 aaKnown RBP8.11□□□□□ -1.11
VTI1A-204ENST00000480057 IQCJQ1A5X6 159 aa8.11□□□□□ -1.11
VTI1A-204ENST00000480057 C9orf66Q5T8R8 295 aa8.11□□□□□ -1.11
VTI1A-204ENST00000480057 NIT1Q86X76 327 aa8.11□□□□□ -1.11
VTI1A-204ENST00000480057 STHQ8IWL8 128 aa8.11□□□□□ -1.11
VTI1A-204ENST00000480057 DEFB125Q8N687 156 aa8.11□□□□□ -1.11
VTI1A-204ENST00000480057 SYT8Q8NBV8 401 aa8.11□□□□□ -1.11
VTI1A-204ENST00000480057 PTH2Q96A98 100 aa8.11□□□□□ -1.11
VTI1A-204ENST00000480057 MRAP2Q96G30 205 aa8.11□□□□□ -1.11
VTI1A-204ENST00000480057 PRELID3AQ96N28 172 aa8.11□□□□□ -1.11
VTI1A-204ENST00000480057 AP1S3Q96PC3 154 aa8.11□□□□□ -1.11
VTI1A-204ENST00000480057 C12orf57Q99622 126 aa8.11□□□□□ -1.11
VTI1A-204ENST00000480057 MCRIP2Q9BUT9 160 aaKnown RBP8.11□□□□□ -1.11
VTI1A-204ENST00000480057 DPH3P1Q9H4G8 78 aa8.11□□□□□ -1.11
VTI1A-204ENST00000480057 NF1P21359 2839 aa8.1□□□□□ -1.11
VTI1A-204ENST00000480057 LINC00614P0C842 121 aa8.1□□□□□ -1.11
VTI1A-204ENST00000480057 JOSD1Q15040 202 aaPredicted RBP8.1□□□□□ -1.11
VTI1A-204ENST00000480057 PIK3CD-AS1Q5SR53 167 aa8.1□□□□□ -1.11
VTI1A-204ENST00000480057 POM121L12Q8N7R1 296 aa8.1□□□□□ -1.11
VTI1A-204ENST00000480057 GSN-AS1Q9NRJ2 163 aa8.1□□□□□ -1.11
VTI1A-204ENST00000480057 C2CD3Q4AC94 2353 aa8.09□□□□□ -1.11
VTI1A-204ENST00000480057 PRSS47A8MTI9 375 aa8.09□□□□□ -1.11
VTI1A-204ENST00000480057 M0R381 172 aa8.09□□□□□ -1.11
VTI1A-204ENST00000480057 EVI2AP22794 236 aa8.09□□□□□ -1.11
VTI1A-204ENST00000480057 AMTP48728 403 aa8.09□□□□□ -1.11
VTI1A-204ENST00000480057 ZNF124Q15973 351 aa8.09□□□□□ -1.11
VTI1A-204ENST00000480057 PYY3Q5JQD4 70 aa8.09□□□□□ -1.11
VTI1A-204ENST00000480057 RNASEKQ6P5S7 137 aaKnown RBP8.09□□□□□ -1.11
VTI1A-204ENST00000480057 Q8N1Y9 231 aa8.09□□□□□ -1.11
VTI1A-204ENST00000480057 URB1-AS1Q96HZ7 61 aa8.09□□□□□ -1.11
VTI1A-204ENST00000480057 C19orf73Q9NVV2 129 aa8.09□□□□□ -1.11
VTI1A-204ENST00000480057 SETXQ7Z333 2677 aaKnown RBP8.09□□□□□ -1.11
VTI1A-204ENST00000480057 PPP1R17O96001 155 aa8.08□□□□□ -1.12
VTI1A-204ENST00000480057 RBMY1A1P0DJD3 496 aaKnown RBP8.08□□□□□ -1.12
VTI1A-204ENST00000480057 RBMY1CP0DJD4 496 aa8.08□□□□□ -1.12
VTI1A-204ENST00000480057 SSTP61278 116 aa8.08□□□□□ -1.12
VTI1A-204ENST00000480057 RBMY1FQ15415 496 aaKnown RBP8.08□□□□□ -1.12
VTI1A-204ENST00000480057 MORN3Q6PF18 240 aaPredicted RBP8.08□□□□□ -1.12
VTI1A-204ENST00000480057 MAP1LC3AQ9H492 121 aa8.08□□□□□ -1.12
VTI1A-204ENST00000480057 TIMM8BQ9Y5J9 83 aaPredicted RBP8.08□□□□□ -1.12
VTI1A-204ENST00000480057 CUBNO60494 3623 aa8.07□□□□□ -1.12
VTI1A-204ENST00000480057 LINC01546A6NGU7 62 aa8.07□□□□□ -1.12
VTI1A-204ENST00000480057 CBY3A6NI87 242 aa8.07□□□□□ -1.12
VTI1A-204ENST00000480057 LCE2BO14633 110 aa8.07□□□□□ -1.12
VTI1A-204ENST00000480057 NPYP01303 97 aa8.07□□□□□ -1.12
VTI1A-204ENST00000480057 ZNF415Q09FC8 603 aa8.07□□□□□ -1.12
VTI1A-204ENST00000480057 PRR31Q5SQ13 230 aa8.07□□□□□ -1.12
VTI1A-204ENST00000480057 FA2HQ7L5A8 372 aa8.07□□□□□ -1.12
VTI1A-204ENST00000480057 WFDC9Q8NEX5 89 aa8.07□□□□□ -1.12
VTI1A-204ENST00000480057 PRSS3P2Q8NHM4 247 aa8.07□□□□□ -1.12
VTI1A-204ENST00000480057 NDUFAF3Q9BU61 184 aa8.07□□□□□ -1.12
VTI1A-204ENST00000480057 ZNF747Q9BV97 191 aa8.07□□□□□ -1.12
VTI1A-204ENST00000480057 C1QTNF4Q9BXJ3 329 aa8.07□□□□□ -1.12
VTI1A-204ENST00000480057 NXT2Q9NPJ8 142 aaKnown RBP8.07□□□□□ -1.12
VTI1A-204ENST00000480057 AP5S1Q9NUS5 200 aa8.07□□□□□ -1.12
VTI1A-204ENST00000480057 KIF25-AS1Q9Y6Z4 181 aa8.07□□□□□ -1.12
VTI1A-204ENST00000480057 F8P00451 2351 aa8.07□□□□□ -1.12
VTI1A-204ENST00000480057 AGRNO00468 2067 aa8.06□□□□□ -1.12
VTI1A-204ENST00000480057 WIPF1O43516 503 aa8.06□□□□□ -1.12
VTI1A-204ENST00000480057 TNFRSF6BO95407 300 aa8.06□□□□□ -1.12
VTI1A-204ENST00000480057 SMIM17P0DL12 118 aa8.06□□□□□ -1.12
VTI1A-204ENST00000480057 FXYD7P58549 80 aa8.06□□□□□ -1.12
VTI1A-204ENST00000480057 Q6ZWC4 215 aa8.06□□□□□ -1.12
VTI1A-204ENST00000480057 SPXQ9BT56 116 aa8.06□□□□□ -1.12
VTI1A-204ENST00000480057 MDFICQ9P1T7 246 aa8.06□□□□□ -1.12
VTI1A-204ENST00000480057 IGHV1-24A0A0C4DH33 117 aa8.05□□□□□ -1.12
VTI1A-204ENST00000480057 GTSCR1Q86UQ5 136 aa8.05□□□□□ -1.12
VTI1A-204ENST00000480057 C14orf178Q8N769 122 aaPredicted RBP8.05□□□□□ -1.12
VTI1A-204ENST00000480057 NRACQ8N912 160 aa8.05□□□□□ -1.12
VTI1A-204ENST00000480057 LINC01587Q99440 93 aa8.05□□□□□ -1.12
VTI1A-204ENST00000480057 C20orf78Q9BR46 151 aa8.05□□□□□ -1.12
VTI1A-204ENST00000480057 FLNBO75369 2602 aaKnown RBP8.04□□□□□ -1.12
VTI1A-204ENST00000480057 SMKR1H3BMG3 65 aa8.04□□□□□ -1.12
VTI1A-204ENST00000480057 K7EMI3 77 aa8.04□□□□□ -1.12
VTI1A-204ENST00000480057 M0R2P5 195 aa8.04□□□□□ -1.12
VTI1A-204ENST00000480057 NCR2O95944 276 aa8.04□□□□□ -1.12
VTI1A-204ENST00000480057 IFI27P40305 119 aaPredicted RBP8.04□□□□□ -1.12
VTI1A-204ENST00000480057 LINC00315P59091 139 aa8.04□□□□□ -1.12
VTI1A-204ENST00000480057 RPL32P62910 135 aaKnown RBP8.04□□□□□ -1.12
VTI1A-204ENST00000480057 KRTAP24-1Q3LI83 254 aa8.04□□□□□ -1.12
VTI1A-204ENST00000480057 FAM19A2Q8N3H0 131 aa8.04□□□□□ -1.12
VTI1A-204ENST00000480057 Q8N8P6 123 aa8.04□□□□□ -1.12
VTI1A-204ENST00000480057 NIT2Q9NQR4 276 aa8.04□□□□□ -1.12
VTI1A-204ENST00000480057 GOLT1BQ9Y3E0 138 aa8.04□□□□□ -1.12
VTI1A-204ENST00000480057 SORL1Q92673 2214 aa8.03□□□□□ -1.12
VTI1A-204ENST00000480057 WNK1Q9H4A3 2382 aa8.03□□□□□ -1.12
VTI1A-204ENST00000480057 S100A12P80511 92 aa8.03□□□□□ -1.12
VTI1A-204ENST00000480057 C1orf158Q8N1D5 194 aa8.03□□□□□ -1.12
VTI1A-204ENST00000480057 C11orf72Q8NBR9 251 aa8.03□□□□□ -1.12
VTI1A-204ENST00000480057 EDA2RQ9HAV5 297 aa8.03□□□□□ -1.12
VTI1A-204ENST00000480057 HSPB8Q9UJY1 196 aa8.03□□□□□ -1.12
VTI1A-204ENST00000480057 MUC4Q99102 2169 aa8.03□□□□□ -1.12
VTI1A-204ENST00000480057 IGLV2-18A0A075B6J9 118 aa8.02□□□□□ -1.13
VTI1A-204ENST00000480057 LOC389332A0A1B0GUA5 103 aa8.02□□□□□ -1.13
VTI1A-204ENST00000480057 A8MWV9 139 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms