RNA–Protein interactions for RNA: ENST00000478209.1

PDZRN3-207, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 4

Gene PDZRN3, Length 757 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-207ENST00000478209 IL36BQ9NZH7 164 aa11.47□□□□□ -0.57
PDZRN3-207ENST00000478209 RYR3Q15413 4870 aa11.47□□□□□ -0.57
PDZRN3-207ENST00000478209 RAB19A4D1S5 217 aa11.46□□□□□ -0.57
PDZRN3-207ENST00000478209 RBFOX3A6NFN3 312 aa11.46□□□□□ -0.57
PDZRN3-207ENST00000478209 PGPEP1LA6NFU8 196 aa11.46□□□□□ -0.57
PDZRN3-207ENST00000478209 MGST1P10620 155 aaKnown RBP11.46□□□□□ -0.57
PDZRN3-207ENST00000478209 CRYBA4P53673 196 aa11.46□□□□□ -0.57
PDZRN3-207ENST00000478209 ZNF506Q5JVG8 444 aa11.46□□□□□ -0.57
PDZRN3-207ENST00000478209 SMIM12Q96EX1 92 aa11.46□□□□□ -0.57
PDZRN3-207ENST00000478209 HHLA3Q9XRX5 114 aa11.46□□□□□ -0.57
PDZRN3-207ENST00000478209 CIDEAO60543 219 aa11.45□□□□□ -0.58
PDZRN3-207ENST00000478209 ARMS2P0C7Q2 107 aa11.45□□□□□ -0.58
PDZRN3-207ENST00000478209 FAM3BP58499 235 aaPredicted RBP11.45□□□□□ -0.58
PDZRN3-207ENST00000478209 SYT8Q8NBV8 401 aa11.45□□□□□ -0.58
PDZRN3-207ENST00000478209 ICOSQ9Y6W8 199 aa11.45□□□□□ -0.58
PDZRN3-207ENST00000478209 RS1O15537 224 aa11.44□□□□□ -0.58
PDZRN3-207ENST00000478209 CXCL1P09341 107 aa11.44□□□□□ -0.58
PDZRN3-207ENST00000478209 TOR2AQ5JU69 321 aa11.44□□□□□ -0.58
PDZRN3-207ENST00000478209 PIK3CD-AS1Q5SR53 167 aa11.44□□□□□ -0.58
PDZRN3-207ENST00000478209 PCNPQ8WW12 178 aaKnown RBP11.44□□□□□ -0.58
PDZRN3-207ENST00000478209 BIN3Q9NQY0 253 aa11.44□□□□□ -0.58
PDZRN3-207ENST00000478209 A0A096LPF7 62 aa11.43□□□□□ -0.58
PDZRN3-207ENST00000478209 TMEM250H0YL14 139 aa11.43□□□□□ -0.58
PDZRN3-207ENST00000478209 RPL19P84098 196 aaKnown RBP11.43□□□□□ -0.58
PDZRN3-207ENST00000478209 CFAP126Q5VTH2 177 aa11.43□□□□□ -0.58
PDZRN3-207ENST00000478209 TEX261Q6UWH6 196 aa11.43□□□□□ -0.58
PDZRN3-207ENST00000478209 DAZAP1Q96EP5 407 aaKnown RBP11.43□□□□□ -0.58
PDZRN3-207ENST00000478209 EIF5A2Q9GZV4 153 aaKnown RBP11.43□□□□□ -0.58
PDZRN3-207ENST00000478209 PHLDA3Q9Y5J5 127 aa11.43□□□□□ -0.58
PDZRN3-207ENST00000478209 A8MWV9 139 aa11.42□□□□□ -0.58
PDZRN3-207ENST00000478209 IGLV2-8P01709 118 aa11.42□□□□□ -0.58
PDZRN3-207ENST00000478209 MED14OSP0DP75 135 aa11.42□□□□□ -0.58
PDZRN3-207ENST00000478209 MRPL23Q16540 153 aaKnown RBP11.42□□□□□ -0.58
PDZRN3-207ENST00000478209 FAM210AQ96ND0 272 aa11.42□□□□□ -0.58
PDZRN3-207ENST00000478209 NACAE9PAV3 2078 aa11.41□□□□□ -0.58
PDZRN3-207ENST00000478209 TRBV20OR9-2A0A075B6H5 130 aa11.41□□□□□ -0.58
PDZRN3-207ENST00000478209 GATA1P15976 413 aaPredicted RBP11.41□□□□□ -0.58
PDZRN3-207ENST00000478209 ZFP82Q8N141 532 aa11.41□□□□□ -0.58
PDZRN3-207ENST00000478209 PARLQ9H300 379 aa11.41□□□□□ -0.58
PDZRN3-207ENST00000478209 SCRT2Q9NQ03 307 aa11.41□□□□□ -0.58
PDZRN3-207ENST00000478209 LINC00588Q9Y4M8 146 aa11.41□□□□□ -0.58
PDZRN3-207ENST00000478209 IGHV3-73A0A0B4J1V6 119 aa11.4□□□□□ -0.58
PDZRN3-207ENST00000478209 GYPEP15421 78 aa11.4□□□□□ -0.58
PDZRN3-207ENST00000478209 SRIP30626 198 aa11.4□□□□□ -0.58
PDZRN3-207ENST00000478209 CEBPGP53567 150 aa11.4□□□□□ -0.58
PDZRN3-207ENST00000478209 DMRTA1Q5VZB9 504 aa11.4□□□□□ -0.58
PDZRN3-207ENST00000478209 IGLV2-18A0A075B6J9 118 aa11.39□□□□□ -0.59
PDZRN3-207ENST00000478209 M0R381 172 aa11.39□□□□□ -0.59
PDZRN3-207ENST00000478209 NDUFS6O75380 124 aaKnown RBP11.39□□□□□ -0.59
PDZRN3-207ENST00000478209 P01737 135 aa11.39□□□□□ -0.59
PDZRN3-207ENST00000478209 RPS20P60866 119 aaKnown RBP11.39□□□□□ -0.59
PDZRN3-207ENST00000478209 ESRGQ1W209 222 aa11.39□□□□□ -0.59
PDZRN3-207ENST00000478209 ZNF575Q86XF7 245 aa11.39□□□□□ -0.59
PDZRN3-207ENST00000478209 OR2D3Q8NGH3 330 aa11.39□□□□□ -0.59
PDZRN3-207ENST00000478209 PRADC1Q9BSG0 188 aa11.39□□□□□ -0.59
PDZRN3-207ENST00000478209 HYDINQ4G0P3 5121 aa11.38□□□□□ -0.59
PDZRN3-207ENST00000478209 XKRY2A2RUG3 117 aa11.38□□□□□ -0.59
PDZRN3-207ENST00000478209 C19orf71A6NCJ1 209 aa11.38□□□□□ -0.59
PDZRN3-207ENST00000478209 K7EQD1 137 aa11.38□□□□□ -0.59
PDZRN3-207ENST00000478209 RHODO00212 210 aa11.38□□□□□ -0.59
PDZRN3-207ENST00000478209 RHOHQ15669 191 aa11.38□□□□□ -0.59
PDZRN3-207ENST00000478209 ZFP2Q6ZN57 461 aa11.38□□□□□ -0.59
PDZRN3-207ENST00000478209 NEGR1Q7Z3B1 354 aa11.38□□□□□ -0.59
PDZRN3-207ENST00000478209 MRPS16Q9Y3D3 137 aaKnown RBP11.38□□□□□ -0.59
PDZRN3-207ENST00000478209 TRBV6-4A0A1B0GX49 114 aa11.37□□□□□ -0.59
PDZRN3-207ENST00000478209 M0R2N4 97 aa11.37□□□□□ -0.59
PDZRN3-207ENST00000478209 SNAI2O43623 268 aa11.37□□□□□ -0.59
PDZRN3-207ENST00000478209 ZNRF2Q8NHG8 242 aa11.37□□□□□ -0.59
PDZRN3-207ENST00000478209 JPT2Q9H910 190 aa11.37□□□□□ -0.59
PDZRN3-207ENST00000478209 OR5AL1P0C617 328 aa11.36□□□□□ -0.59
PDZRN3-207ENST00000478209 FAM74A4Q5TZK3 123 aa11.36□□□□□ -0.59
PDZRN3-207ENST00000478209 SPANXN1Q5VSR9 72 aa11.36□□□□□ -0.59
PDZRN3-207ENST00000478209 SH2D6Q7Z4S9 175 aa11.36□□□□□ -0.59
PDZRN3-207ENST00000478209 SLC25A29Q8N8R3 303 aa11.36□□□□□ -0.59
PDZRN3-207ENST00000478209 OR10AG1Q8NH19 301 aa11.36□□□□□ -0.59
PDZRN3-207ENST00000478209 OCC1Q8TAD7 63 aa11.36□□□□□ -0.59
PDZRN3-207ENST00000478209 SFRP2Q96HF1 295 aa11.36□□□□□ -0.59
PDZRN3-207ENST00000478209 UPK3BQ9BT76 320 aa11.36□□□□□ -0.59
PDZRN3-207ENST00000478209 SSBP4Q9BWG4 385 aaPredicted RBP11.36□□□□□ -0.59
PDZRN3-207ENST00000478209 VPS13DQ5THJ4 4388 aa11.36□□□□□ -0.59
PDZRN3-207ENST00000478209 LOC100131303A0A0U1RQF7 123 aa11.35□□□□□ -0.59
PDZRN3-207ENST00000478209 SRP19P09132 144 aaKnown RBP11.35□□□□□ -0.59
PDZRN3-207ENST00000478209 SMIM7Q9BQ49 75 aa11.35□□□□□ -0.59
PDZRN3-207ENST00000478209 A0A087WWL8 130 aa11.34□□□□□ -0.59
PDZRN3-207ENST00000478209 NXPH4O95158 308 aa11.34□□□□□ -0.59
PDZRN3-207ENST00000478209 GZMBP10144 247 aa11.34□□□□□ -0.59
PDZRN3-207ENST00000478209 FER1L6-AS1Q8NA97 138 aa11.34□□□□□ -0.59
PDZRN3-207ENST00000478209 NUDT10Q8NFP7 164 aa11.34□□□□□ -0.59
PDZRN3-207ENST00000478209 NUDT11Q96G61 164 aa11.34□□□□□ -0.59
PDZRN3-207ENST00000478209 TPPP3Q9BW30 176 aa11.34□□□□□ -0.59
PDZRN3-207ENST00000478209 SAMD10Q9BYL1 202 aa11.34□□□□□ -0.59
PDZRN3-207ENST00000478209 Q9H8V8 135 aa11.34□□□□□ -0.59
PDZRN3-207ENST00000478209 MUC21A0A0G2JKD1 596 aa11.33□□□□□ -0.6
PDZRN3-207ENST00000478209 MUC21A0A140T8X8 626 aa11.33□□□□□ -0.6
PDZRN3-207ENST00000478209 ZNF727A8MUV8 499 aa11.33□□□□□ -0.6
PDZRN3-207ENST00000478209 K7EN84 100 aa11.33□□□□□ -0.6
PDZRN3-207ENST00000478209 IGLC6P0CF74 106 aa11.33□□□□□ -0.6
PDZRN3-207ENST00000478209 PEA15Q15121 130 aa11.33□□□□□ -0.6
PDZRN3-207ENST00000478209 UFSP1Q6NVU6 142 aa11.33□□□□□ -0.6
PDZRN3-207ENST00000478209 LYPD5Q6UWN5 251 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms