RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 TCTEX1D4Q5JR98 221 aa8.51□□□□□ -1.05
COL27A1-204ENST00000477421 MTURNQ8N3F0 131 aa8.51□□□□□ -1.05
COL27A1-204ENST00000477421 PHLDA1Q8WV24 401 aaPredicted RBP8.51□□□□□ -1.05
COL27A1-204ENST00000477421 XCL2Q9UBD3 114 aa8.51□□□□□ -1.05
COL27A1-204ENST00000477421 ODF3BA8MYP8 253 aa8.51□□□□□ -1.05
COL27A1-204ENST00000477421 SLC25A16P16260 332 aa8.51□□□□□ -1.05
COL27A1-204ENST00000477421 SEC11AP67812 179 aa8.51□□□□□ -1.05
COL27A1-204ENST00000477421 NSUN5P1Q3KNT7 163 aa8.51□□□□□ -1.05
COL27A1-204ENST00000477421 CCDC140Q96MF4 163 aa8.51□□□□□ -1.05
COL27A1-204ENST00000477421 PEMTQ9UBM1 199 aa8.51□□□□□ -1.05
COL27A1-204ENST00000477421 IGHV3-16A0A0C4DH30 117 aa8.5□□□□□ -1.05
COL27A1-204ENST00000477421 HOXA3O43365 443 aaPredicted RBP8.5□□□□□ -1.05
COL27A1-204ENST00000477421 CRIP1P50238 77 aa8.5□□□□□ -1.05
COL27A1-204ENST00000477421 C10orf105Q8TEF2 133 aa8.5□□□□□ -1.05
COL27A1-204ENST00000477421 A0A1B0GXF2 115 aa8.5□□□□□ -1.05
COL27A1-204ENST00000477421 OR9G4Q8NGQ1 327 aa8.5□□□□□ -1.05
COL27A1-204ENST00000477421 IGHV7-4-1A0A0J9YVY3 117 aa8.5□□□□□ -1.05
COL27A1-204ENST00000477421 A0A1B0GWB2 263 aa8.5□□□□□ -1.05
COL27A1-204ENST00000477421 IGF1P05019 195 aa8.5□□□□□ -1.05
COL27A1-204ENST00000477421 SAMD5Q5TGI4 173 aa8.5□□□□□ -1.05
COL27A1-204ENST00000477421 LYRM7Q5U5X0 104 aa8.5□□□□□ -1.05
COL27A1-204ENST00000477421 RPL39LQ96EH5 51 aaKnown RBP8.5□□□□□ -1.05
COL27A1-204ENST00000477421 C2orf70A6NJV1 201 aa8.49□□□□□ -1.05
COL27A1-204ENST00000477421 CD28P10747 220 aa8.49□□□□□ -1.05
COL27A1-204ENST00000477421 LINC00310P59036 64 aa8.49□□□□□ -1.05
COL27A1-204ENST00000477421 NPC2P61916 151 aa8.49□□□□□ -1.05
COL27A1-204ENST00000477421 TP53TG1Q9Y2A0 90 aa8.49□□□□□ -1.05
COL27A1-204ENST00000477421 TRAV2A0A0B4J234 112 aa8.49□□□□□ -1.05
COL27A1-204ENST00000477421 TNFRSF13BO14836 293 aaPredicted RBP8.49□□□□□ -1.05
COL27A1-204ENST00000477421 UBE2L6O14933 153 aa8.49□□□□□ -1.05
COL27A1-204ENST00000477421 CRXO43186 299 aaPredicted RBP8.49□□□□□ -1.05
COL27A1-204ENST00000477421 Q8N8P6 123 aa8.49□□□□□ -1.05
COL27A1-204ENST00000477421 ZNF479Q96JC4 524 aa8.49□□□□□ -1.05
COL27A1-204ENST00000477421 CHAC1Q9BUX1 264 aa8.49□□□□□ -1.05
COL27A1-204ENST00000477421 TOMM7Q9P0U1 55 aa8.49□□□□□ -1.05
COL27A1-204ENST00000477421 SMPXQ9UHP9 88 aa8.49□□□□□ -1.05
COL27A1-204ENST00000477421 COX8AP10176 69 aa8.49□□□□□ -1.05
COL27A1-204ENST00000477421 HIST2H2BDQ6DRA6 164 aa8.49□□□□□ -1.05
COL27A1-204ENST00000477421 ZZEF1O43149 2961 aa8.48□□□□□ -1.05
COL27A1-204ENST00000477421 SDHAF1A6NFY7 115 aa8.48□□□□□ -1.05
COL27A1-204ENST00000477421 ESDP10768 282 aa8.48□□□□□ -1.05
COL27A1-204ENST00000477421 MYCNOSP40205 109 aa8.48□□□□□ -1.05
COL27A1-204ENST00000477421 MEIG1Q5JSS6 88 aa8.48□□□□□ -1.05
COL27A1-204ENST00000477421 C1orf43Q9BWL3 253 aa8.48□□□□□ -1.05
COL27A1-204ENST00000477421 VCYO14598 125 aa8.48□□□□□ -1.05
COL27A1-204ENST00000477421 PAPPA-AS1Q5QFB9 102 aa8.48□□□□□ -1.05
COL27A1-204ENST00000477421 MRAP2Q96G30 205 aa8.48□□□□□ -1.05
COL27A1-204ENST00000477421 SMIM2Q9BVW6 85 aa8.48□□□□□ -1.05
COL27A1-204ENST00000477421 ATMQ13315 3056 aa8.48□□□□□ -1.05
COL27A1-204ENST00000477421 TRGV1A0A0A0MS02 117 aa8.48□□□□□ -1.05
COL27A1-204ENST00000477421 GAGE12BA1L429 117 aa8.48□□□□□ -1.05
COL27A1-204ENST00000477421 SAP30O75446 220 aa8.48□□□□□ -1.05
COL27A1-204ENST00000477421 RPL35AP18077 110 aaKnown RBP8.48□□□□□ -1.05
COL27A1-204ENST00000477421 C19orf54Q5BKX5 351 aa8.48□□□□□ -1.05
COL27A1-204ENST00000477421 BVES-AS1Q5T3Y7 98 aa8.47□□□□□ -1.05
COL27A1-204ENST00000477421 SAMD13Q5VXD3 122 aa8.47□□□□□ -1.05
COL27A1-204ENST00000477421 LGALS9BQ3B8N2 356 aa8.47□□□□□ -1.05
COL27A1-204ENST00000477421 LGALS9CQ6DKI2 356 aa8.47□□□□□ -1.05
COL27A1-204ENST00000477421 C11orf71Q6IPW1 123 aa8.47□□□□□ -1.05
COL27A1-204ENST00000477421 WDFY3Q8IZQ1 3526 aa8.47□□□□□ -1.05
COL27A1-204ENST00000477421 K7ERJ3 54 aa8.47□□□□□ -1.05
COL27A1-204ENST00000477421 CD5LO43866 347 aa8.47□□□□□ -1.05
COL27A1-204ENST00000477421 TMEM262E9PQX1 116 aa8.46□□□□□ -1.05
COL27A1-204ENST00000477421 IGLV2-11P01706 119 aa8.46□□□□□ -1.05
COL27A1-204ENST00000477421 RNASE13Q5GAN3 156 aaKnown RBP8.46□□□□□ -1.05
COL27A1-204ENST00000477421 TMEM190Q8WZ59 177 aa8.46□□□□□ -1.05
COL27A1-204ENST00000477421 TRGV11A0A075B6L2 103 aa8.46□□□□□ -1.05
COL27A1-204ENST00000477421 IGHV3-38A0A0C4DH36 116 aa8.46□□□□□ -1.05
COL27A1-204ENST00000477421 HOXD3P31249 432 aaPredicted RBP8.46□□□□□ -1.05
COL27A1-204ENST00000477421 C10orf99Q6UWK7 81 aa8.46□□□□□ -1.05
COL27A1-204ENST00000477421 JPT2Q9H910 190 aa8.46□□□□□ -1.05
COL27A1-204ENST00000477421 PLNP26678 52 aa8.46□□□□□ -1.06
COL27A1-204ENST00000477421 RNASE8Q8TDE3 154 aaKnown RBP8.46□□□□□ -1.06
COL27A1-204ENST00000477421 GATA3P23771 443 aa8.45□□□□□ -1.06
COL27A1-204ENST00000477421 SMAD5-AS1Q9Y6J3 95 aa8.45□□□□□ -1.06
COL27A1-204ENST00000477421 KALRNO60229 2985 aa8.45□□□□□ -1.06
COL27A1-204ENST00000477421 HTN3P15516 51 aa8.45□□□□□ -1.06
COL27A1-204ENST00000477421 SLURP1P55000 103 aa8.45□□□□□ -1.06
COL27A1-204ENST00000477421 Q6ZS46 218 aa8.45□□□□□ -1.06
COL27A1-204ENST00000477421 DMXL1Q9Y485 3027 aa8.45□□□□□ -1.06
COL27A1-204ENST00000477421 CFHR3Q02985 330 aa8.45□□□□□ -1.06
COL27A1-204ENST00000477421 Q6ZQT7 251 aa8.45□□□□□ -1.06
COL27A1-204ENST00000477421 RPL13AP40429 203 aaKnown RBP8.44□□□□□ -1.06
COL27A1-204ENST00000477421 HECTD1Q9ULT8 2610 aa8.44□□□□□ -1.06
COL27A1-204ENST00000477421 IGHV1OR15-1A0A075B7D0 117 aa8.44□□□□□ -1.06
COL27A1-204ENST00000477421 LINC01545Q5VT33 79 aa8.44□□□□□ -1.06
COL27A1-204ENST00000477421 ZNF625Q96I27 306 aaPredicted RBP8.44□□□□□ -1.06
COL27A1-204ENST00000477421 RAI1Q7Z5J4 1906 aaPredicted RBP8.43□□□□□ -1.06
COL27A1-204ENST00000477421 CCL25O15444 150 aa8.43□□□□□ -1.06
COL27A1-204ENST00000477421 APRG1Q8IVJ8 170 aa8.43□□□□□ -1.06
COL27A1-204ENST00000477421 GAS8-AS1O95177 125 aa8.43□□□□□ -1.06
COL27A1-204ENST00000477421 LINC01559Q495D7 138 aa8.43□□□□□ -1.06
COL27A1-204ENST00000477421 MRPL52Q86TS9 123 aaKnown RBP8.43□□□□□ -1.06
COL27A1-204ENST00000477421 PRADC1Q9BSG0 188 aa8.43□□□□□ -1.06
COL27A1-204ENST00000477421 IGHG2P01859 326 aa8.43□□□□□ -1.06
COL27A1-204ENST00000477421 COX6CP09669 75 aa8.43□□□□□ -1.06
COL27A1-204ENST00000477421 TRAV13-1A0A0B4J241 112 aa8.42□□□□□ -1.06
COL27A1-204ENST00000477421 AMTNQ6UX39 209 aa8.42□□□□□ -1.06
COL27A1-204ENST00000477421 VPREB3Q9UKI3 123 aa8.42□□□□□ -1.06
COL27A1-204ENST00000477421 TNRC18O15417 2968 aaPredicted RBP8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms