RNA–Protein interactions for RNA: ENST00000475235.1

HLA-DOB-208, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 1,514 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-208ENST00000475235 MUC21A0A140T8X8 626 aa8.61□□□□□ -1.03
HLA-DOB-208ENST00000475235 GAGE2BQ13066 116 aa8.61□□□□□ -1.03
HLA-DOB-208ENST00000475235 GAGE2EQ4V326 116 aa8.61□□□□□ -1.03
HLA-DOB-208ENST00000475235 MUC21Q5SSG8 566 aa8.61□□□□□ -1.03
HLA-DOB-208ENST00000475235 PVRIGQ6DKI7 326 aa8.61□□□□□ -1.03
HLA-DOB-208ENST00000475235 LINC00322Q6ZN03 302 aaPredicted RBP8.61□□□□□ -1.03
HLA-DOB-208ENST00000475235 OR10J6PQ8NGY7 276 aa8.61□□□□□ -1.03
HLA-DOB-208ENST00000475235 PLEKHB2Q96CS7 222 aa8.61□□□□□ -1.03
HLA-DOB-208ENST00000475235 SLC25A39Q9BZJ4 359 aaPredicted RBP8.61□□□□□ -1.03
HLA-DOB-208ENST00000475235 GAGE2DQ9UEU5 116 aa8.61□□□□□ -1.03
HLA-DOB-208ENST00000475235 PXMP4Q9Y6I8 212 aa8.61□□□□□ -1.03
HLA-DOB-208ENST00000475235 SORL1Q92673 2214 aa8.61□□□□□ -1.03
HLA-DOB-208ENST00000475235 FAM90A26D6RGX4 464 aa8.6□□□□□ -1.03
HLA-DOB-208ENST00000475235 ATP5LO75964 103 aa8.6□□□□□ -1.03
HLA-DOB-208ENST00000475235 CA1P00915 261 aaPredicted RBP8.6□□□□□ -1.03
HLA-DOB-208ENST00000475235 RNASE2P10153 161 aaKnown RBP8.6□□□□□ -1.03
HLA-DOB-208ENST00000475235 CD164Q04900 197 aa8.6□□□□□ -1.03
HLA-DOB-208ENST00000475235 SLC25A34Q6PIV7 304 aa8.6□□□□□ -1.03
HLA-DOB-208ENST00000475235 Q6ZRM9 215 aa8.6□□□□□ -1.03
HLA-DOB-208ENST00000475235 GOLT1AQ6ZVE7 132 aa8.6□□□□□ -1.03
HLA-DOB-208ENST00000475235 FAM19A1Q7Z5A9 133 aa8.6□□□□□ -1.03
HLA-DOB-208ENST00000475235 MUC7Q8TAX7 377 aa8.6□□□□□ -1.03
HLA-DOB-208ENST00000475235 VGLL1Q99990 258 aa8.6□□□□□ -1.03
HLA-DOB-208ENST00000475235 HBE1P02100 147 aa8.59□□□□□ -1.03
HLA-DOB-208ENST00000475235 MT-ATP8P03928 68 aa8.59□□□□□ -1.03
HLA-DOB-208ENST00000475235 RPL35AP18077 110 aaKnown RBP8.59□□□□□ -1.03
HLA-DOB-208ENST00000475235 SCGB1C1Q8TD33 95 aa8.59□□□□□ -1.03
HLA-DOB-208ENST00000475235 TMEM37Q8WXS4 190 aa8.59□□□□□ -1.03
HLA-DOB-208ENST00000475235 TMEM230Q96A57 120 aa8.59□□□□□ -1.03
HLA-DOB-208ENST00000475235 SDF2L1Q9HCN8 221 aa8.59□□□□□ -1.03
HLA-DOB-208ENST00000475235 CACNG5Q9UF02 275 aa8.59□□□□□ -1.03
HLA-DOB-208ENST00000475235 SELENOKQ9Y6D0 94 aa8.59□□□□□ -1.03
HLA-DOB-208ENST00000475235 TRAV5A0A0B4J249 113 aa8.59□□□□□ -1.03
HLA-DOB-208ENST00000475235 IGHV7-4-1A0A0J9YVY3 117 aa8.59□□□□□ -1.03
HLA-DOB-208ENST00000475235 ISLRO14498 428 aa8.59□□□□□ -1.03
HLA-DOB-208ENST00000475235 IGHV3-48P01763 117 aa8.59□□□□□ -1.03
HLA-DOB-208ENST00000475235 OPRK1P41145 380 aa8.59□□□□□ -1.03
HLA-DOB-208ENST00000475235 ASIPP42127 132 aa8.59□□□□□ -1.03
HLA-DOB-208ENST00000475235 TNP2Q05952 138 aa8.59□□□□□ -1.03
HLA-DOB-208ENST00000475235 TMEM187Q14656 261 aa8.59□□□□□ -1.03
HLA-DOB-208ENST00000475235 AMTNQ6UX39 209 aa8.59□□□□□ -1.03
HLA-DOB-208ENST00000475235 RASL10AQ92737 203 aa8.59□□□□□ -1.03
HLA-DOB-208ENST00000475235 TMEM191AQ9H0A3 160 aa8.59□□□□□ -1.03
HLA-DOB-208ENST00000475235 WFDC10AQ9H1F0 79 aa8.59□□□□□ -1.03
HLA-DOB-208ENST00000475235 MANBALQ9NQG1 85 aa8.59□□□□□ -1.03
HLA-DOB-208ENST00000475235 KMT2CQ8NEZ4 4911 aaKnown RBP8.59□□□□□ -1.03
HLA-DOB-208ENST00000475235 IGHV3OR16-8A0A075B7F1 116 aa8.58□□□□□ -1.04
HLA-DOB-208ENST00000475235 RBMY1BA6NDE4 496 aaKnown RBP8.58□□□□□ -1.04
HLA-DOB-208ENST00000475235 RBMY1EA6NEQ0 496 aaKnown RBP8.58□□□□□ -1.04
HLA-DOB-208ENST00000475235 CEBPZOSA8MTT3 80 aa8.58□□□□□ -1.04
HLA-DOB-208ENST00000475235 GGTLC3B5MD39 225 aa8.58□□□□□ -1.04
HLA-DOB-208ENST00000475235 NCR2O95944 276 aa8.58□□□□□ -1.04
HLA-DOB-208ENST00000475235 RBMY1DP0C7P1 496 aaKnown RBP8.58□□□□□ -1.04
HLA-DOB-208ENST00000475235 RHPN1-AS1Q9BWJ2 59 aa8.58□□□□□ -1.04
HLA-DOB-208ENST00000475235 EDA2RQ9HAV5 297 aa8.58□□□□□ -1.04
HLA-DOB-208ENST00000475235 TENM3Q9P273 2699 aa8.57□□□□□ -1.04
HLA-DOB-208ENST00000475235 CHEK1O14757 476 aa8.57□□□□□ -1.04
HLA-DOB-208ENST00000475235 PITX3O75364 302 aa8.57□□□□□ -1.04
HLA-DOB-208ENST00000475235 LEPP41159 167 aa8.57□□□□□ -1.04
HLA-DOB-208ENST00000475235 SUPT4H1P63272 117 aaKnown RBP8.57□□□□□ -1.04
HLA-DOB-208ENST00000475235 C2orf83Q53S99 150 aa8.57□□□□□ -1.04
HLA-DOB-208ENST00000475235 C1orf158Q8N1D5 194 aa8.57□□□□□ -1.04
HLA-DOB-208ENST00000475235 ZNF414Q96IQ9 312 aa8.57□□□□□ -1.04
HLA-DOB-208ENST00000475235 LINC00477Q96M19 166 aa8.57□□□□□ -1.04
HLA-DOB-208ENST00000475235 RNF126Q9BV68 326 aa8.57□□□□□ -1.04
HLA-DOB-208ENST00000475235 A0A1B0GV50 99 aa8.56□□□□□ -1.04
HLA-DOB-208ENST00000475235 CXorf1O96002 111 aa8.56□□□□□ -1.04
HLA-DOB-208ENST00000475235 IGLC6P0CF74 106 aa8.56□□□□□ -1.04
HLA-DOB-208ENST00000475235 CMC4P56277 68 aaPredicted RBP8.56□□□□□ -1.04
HLA-DOB-208ENST00000475235 NMSQ5H8A3 153 aa8.56□□□□□ -1.04
HLA-DOB-208ENST00000475235 MORN3Q6PF18 240 aaPredicted RBP8.56□□□□□ -1.04
HLA-DOB-208ENST00000475235 CYB561D1Q8N8Q1 229 aa8.56□□□□□ -1.04
HLA-DOB-208ENST00000475235 H3BMG7 143 aa8.55□□□□□ -1.04
HLA-DOB-208ENST00000475235 VPREB1P12018 145 aa8.55□□□□□ -1.04
HLA-DOB-208ENST00000475235 GALR1P47211 349 aa8.55□□□□□ -1.04
HLA-DOB-208ENST00000475235 CASC10Q5T4H9 136 aa8.55□□□□□ -1.04
HLA-DOB-208ENST00000475235 LYZL2Q7Z4W2 148 aa8.55□□□□□ -1.04
HLA-DOB-208ENST00000475235 ATOH7Q8N100 152 aa8.55□□□□□ -1.04
HLA-DOB-208ENST00000475235 TMEM256Q8N2U0 113 aa8.55□□□□□ -1.04
HLA-DOB-208ENST00000475235 KIR2DL4Q99706 377 aa8.55□□□□□ -1.04
HLA-DOB-208ENST00000475235 PRR13Q9NZ81 148 aa8.55□□□□□ -1.04
HLA-DOB-208ENST00000475235 A0A1W2PS18 150 aa8.54□□□□□ -1.04
HLA-DOB-208ENST00000475235 MPDU1O75352 247 aa8.54□□□□□ -1.04
HLA-DOB-208ENST00000475235 ATP5G1P05496 136 aa8.54□□□□□ -1.04
HLA-DOB-208ENST00000475235 ATP5G3P48201 142 aa8.54□□□□□ -1.04
HLA-DOB-208ENST00000475235 APOC4P55056 127 aa8.54□□□□□ -1.04
HLA-DOB-208ENST00000475235 ODF3L2Q3SX64 289 aa8.54□□□□□ -1.04
HLA-DOB-208ENST00000475235 FAM231DQ6ZW35 169 aa8.54□□□□□ -1.04
HLA-DOB-208ENST00000475235 ATP5SQ99766 215 aa8.54□□□□□ -1.04
HLA-DOB-208ENST00000475235 NAA38Q9BRA0 125 aaKnown RBP8.54□□□□□ -1.04
HLA-DOB-208ENST00000475235 VSIRQ9H7M9 311 aa8.54□□□□□ -1.04
HLA-DOB-208ENST00000475235 TRAPPC1Q9Y5R8 145 aa8.54□□□□□ -1.04
HLA-DOB-208ENST00000475235 STAB2Q8WWQ8 2551 aa8.54□□□□□ -1.04
HLA-DOB-208ENST00000475235 IGHV3-49A0A0A0MS15 119 aa8.54□□□□□ -1.04
HLA-DOB-208ENST00000475235 TRAV1-1A0A0B4J248 108 aa8.54□□□□□ -1.04
HLA-DOB-208ENST00000475235 NXPH3O95157 252 aa8.54□□□□□ -1.04
HLA-DOB-208ENST00000475235 NPPCP23582 126 aa8.54□□□□□ -1.04
HLA-DOB-208ENST00000475235 KRTDAPP60985 99 aa8.54□□□□□ -1.04
HLA-DOB-208ENST00000475235 FAM90A2PQ658T7 463 aa8.54□□□□□ -1.04
HLA-DOB-208ENST00000475235 LRTM2Q8N967 370 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms