RNA–Protein interactions for RNA: ENST00000474193.1

CCDC171-206, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-206ENST00000474193 C11orf21Q9P2W6 132 aa13.08□□□□□ -0.32
CCDC171-206ENST00000474193 LY96Q9Y6Y9 160 aa13.08□□□□□ -0.32
CCDC171-206ENST00000474193 IGLV2-18A0A075B6J9 118 aa13.07□□□□□ -0.32
CCDC171-206ENST00000474193 IGHV3-16A0A0C4DH30 117 aa13.07□□□□□ -0.32
CCDC171-206ENST00000474193 KRBOX1C9JBD0 128 aa13.07□□□□□ -0.32
CCDC171-206ENST00000474193 LINC01559Q495D7 138 aa13.07□□□□□ -0.32
CCDC171-206ENST00000474193 LINC00612Q8N6U2 182 aa13.07□□□□□ -0.32
CCDC171-206ENST00000474193 C11orf72Q8NBR9 251 aa13.07□□□□□ -0.32
CCDC171-206ENST00000474193 MDFICQ9P1T7 246 aa13.07□□□□□ -0.32
CCDC171-206ENST00000474193 TMSB15BA0A087X1C1 80 aa13.06□□□□□ -0.32
CCDC171-206ENST00000474193 IGKV3D-20A0A0C4DH25 116 aa13.06□□□□□ -0.32
CCDC171-206ENST00000474193 C9JQL5 133 aa13.06□□□□□ -0.32
CCDC171-206ENST00000474193 P01737 135 aa13.06□□□□□ -0.32
CCDC171-206ENST00000474193 TMEM241Q24JQ0 296 aa13.06□□□□□ -0.32
CCDC171-206ENST00000474193 TRGV1A0A0A0MS02 117 aa13.05□□□□□ -0.32
CCDC171-206ENST00000474193 UQCC3Q6UW78 93 aa13.05□□□□□ -0.32
CCDC171-206ENST00000474193 TRAV26-1A0A087WT03 109 aa13.04□□□□□ -0.32
CCDC171-206ENST00000474193 XKRY2A2RUG3 117 aa13.04□□□□□ -0.32
CCDC171-206ENST00000474193 SFTA3P0C7M3 94 aa13.04□□□□□ -0.32
CCDC171-206ENST00000474193 RPS20P60866 119 aaKnown RBP13.04□□□□□ -0.32
CCDC171-206ENST00000474193 Q6ZTI0 123 aa13.04□□□□□ -0.32
CCDC171-206ENST00000474193 COMMD7Q86VX2 200 aa13.04□□□□□ -0.32
CCDC171-206ENST00000474193 NAT8Q9UHE5 227 aa13.04□□□□□ -0.32
CCDC171-206ENST00000474193 GRIFINA4D1Z8 144 aa13.03□□□□□ -0.32
CCDC171-206ENST00000474193 OR2D3Q8NGH3 330 aa13.03□□□□□ -0.32
CCDC171-206ENST00000474193 A0A0J9YY99 117 aa13.02□□□□□ -0.33
CCDC171-206ENST00000474193 C19orf71A6NCJ1 209 aa13.02□□□□□ -0.33
CCDC171-206ENST00000474193 H3BNG1 76 aa13.02□□□□□ -0.33
CCDC171-206ENST00000474193 K7EN84 100 aa13.02□□□□□ -0.33
CCDC171-206ENST00000474193 M0R2P5 195 aa13.02□□□□□ -0.33
CCDC171-206ENST00000474193 SPINK4O60575 86 aa13.02□□□□□ -0.33
CCDC171-206ENST00000474193 ERVFC1-1P60608 527 aa13.02□□□□□ -0.33
CCDC171-206ENST00000474193 LINC01551Q86U37 167 aa13.02□□□□□ -0.33
CCDC171-206ENST00000474193 C18orf15Q96N68 181 aa13.02□□□□□ -0.33
CCDC171-206ENST00000474193 BIRC6Q9NR09 4857 aa13.01□□□□□ -0.33
CCDC171-206ENST00000474193 LINC00862A6NCI5 91 aa13.01□□□□□ -0.33
CCDC171-206ENST00000474193 RPL19P84098 196 aaKnown RBP13.01□□□□□ -0.33
CCDC171-206ENST00000474193 DNLZQ5SXM8 178 aa13.01□□□□□ -0.33
CCDC171-206ENST00000474193 C1orf134Q5TEV5 83 aa13.01□□□□□ -0.33
CCDC171-206ENST00000474193 NUDT10Q8NFP7 164 aa13.01□□□□□ -0.33
CCDC171-206ENST00000474193 NUDT11Q96G61 164 aa13.01□□□□□ -0.33
CCDC171-206ENST00000474193 MRPL16Q9NX20 251 aaKnown RBP13.01□□□□□ -0.33
CCDC171-206ENST00000474193 IL36BQ9NZH7 164 aa13.01□□□□□ -0.33
CCDC171-206ENST00000474193 PRSS29PA6NIE9 313 aa13□□□□□ -0.33
CCDC171-206ENST00000474193 H3BVH4 76 aa13□□□□□ -0.33
CCDC171-206ENST00000474193 CXCL1P09341 107 aa13□□□□□ -0.33
CCDC171-206ENST00000474193 ARMS2P0C7Q2 107 aa13□□□□□ -0.33
CCDC171-206ENST00000474193 RNASE3P12724 160 aaKnown RBP13□□□□□ -0.33
CCDC171-206ENST00000474193 SLAQ13239 276 aa13□□□□□ -0.33
CCDC171-206ENST00000474193 ADIRFQ15847 76 aa13□□□□□ -0.33
CCDC171-206ENST00000474193 C15orf54Q8N8G6 183 aa13□□□□□ -0.33
CCDC171-206ENST00000474193 C9orf85Q96MD7 179 aa13□□□□□ -0.33
CCDC171-206ENST00000474193 RNASE7Q9H1E1 156 aaKnown RBP13□□□□□ -0.33
CCDC171-206ENST00000474193 RPP21Q9H633 154 aaKnown RBP13□□□□□ -0.33
CCDC171-206ENST00000474193 PHLDA3Q9Y5J5 127 aa13□□□□□ -0.33
CCDC171-206ENST00000474193 DNAH10Q8IVF4 4471 aa12.99□□□□□ -0.33
CCDC171-206ENST00000474193 GATCO43716 136 aaKnown RBP12.99□□□□□ -0.33
CCDC171-206ENST00000474193 HOXA5P20719 270 aa12.99□□□□□ -0.33
CCDC171-206ENST00000474193 ZNF876PQ49A33 203 aa12.99□□□□□ -0.33
CCDC171-206ENST00000474193 Q6ZR54 194 aa12.99□□□□□ -0.33
CCDC171-206ENST00000474193 FAM231DQ6ZW35 169 aa12.99□□□□□ -0.33
CCDC171-206ENST00000474193 SYT8Q8NBV8 401 aa12.99□□□□□ -0.33
CCDC171-206ENST00000474193 RASL10AQ92737 203 aa12.99□□□□□ -0.33
CCDC171-206ENST00000474193 DNAH6Q9C0G6 4158 aa12.99□□□□□ -0.33
CCDC171-206ENST00000474193 RPL23P62829 140 aaKnown RBP12.98□□□□□ -0.33
CCDC171-206ENST00000474193 MED14OSP0DP75 135 aa12.97□□□□□ -0.33
CCDC171-206ENST00000474193 ZNRF2Q8NHG8 242 aa12.97□□□□□ -0.33
CCDC171-206ENST00000474193 PTH2Q96A98 100 aa12.97□□□□□ -0.33
CCDC171-206ENST00000474193 LINC00588Q9Y4M8 146 aa12.97□□□□□ -0.33
CCDC171-206ENST00000474193 NACAE9PAV3 2078 aa12.97□□□□□ -0.33
CCDC171-206ENST00000474193 NBDYA0A0U1RRE5 68 aa12.96□□□□□ -0.33
CCDC171-206ENST00000474193 F8W036 122 aa12.96□□□□□ -0.33
CCDC171-206ENST00000474193 PAX4O43316 350 aa12.96□□□□□ -0.33
CCDC171-206ENST00000474193 ISOC2Q96AB3 205 aa12.96□□□□□ -0.33
CCDC171-206ENST00000474193 TPPP3Q9BW30 176 aa12.96□□□□□ -0.33
CCDC171-206ENST00000474193 Q9H8V8 135 aa12.96□□□□□ -0.33
CCDC171-206ENST00000474193 OSTCQ9NRP0 149 aa12.96□□□□□ -0.33
CCDC171-206ENST00000474193 A0A1W2PPQ1 181 aa12.95□□□□□ -0.34
CCDC171-206ENST00000474193 TMEM218A2RU14 115 aa12.95□□□□□ -0.34
CCDC171-206ENST00000474193 A8MWL6 223 aa12.95□□□□□ -0.34
CCDC171-206ENST00000474193 RTL8CO15255 209 aa12.95□□□□□ -0.34
CCDC171-206ENST00000474193 PNRC1Q12796 327 aaPredicted RBP12.95□□□□□ -0.34
CCDC171-206ENST00000474193 ZFP82Q8N141 532 aa12.95□□□□□ -0.34
CCDC171-206ENST00000474193 FER1L6-AS1Q8NA97 138 aa12.95□□□□□ -0.34
CCDC171-206ENST00000474193 OR4C5Q8NGB2 326 aa12.95□□□□□ -0.34
CCDC171-206ENST00000474193 SFRP2Q96HF1 295 aa12.95□□□□□ -0.34
CCDC171-206ENST00000474193 PRO0255Q9UI72 69 aa12.95□□□□□ -0.34
CCDC171-206ENST00000474193 TRGV4A0A0C4DH28 118 aa12.94□□□□□ -0.34
CCDC171-206ENST00000474193 M0R381 172 aa12.94□□□□□ -0.34
CCDC171-206ENST00000474193 IGHV3-53P01767 116 aa12.94□□□□□ -0.34
CCDC171-206ENST00000474193 OR5AL1P0C617 328 aa12.94□□□□□ -0.34
CCDC171-206ENST00000474193 GZMBP10144 247 aa12.94□□□□□ -0.34
CCDC171-206ENST00000474193 TTC32Q5I0X7 151 aa12.94□□□□□ -0.34
CCDC171-206ENST00000474193 PIK3CD-AS1Q5SR53 167 aa12.94□□□□□ -0.34
CCDC171-206ENST00000474193 SPANXN1Q5VSR9 72 aa12.94□□□□□ -0.34
CCDC171-206ENST00000474193 OR10G8Q8NGN5 311 aa12.94□□□□□ -0.34
CCDC171-206ENST00000474193 SCRT2Q9NQ03 307 aa12.94□□□□□ -0.34
CCDC171-206ENST00000474193 HHLA3Q9XRX5 114 aa12.94□□□□□ -0.34
CCDC171-206ENST00000474193 ICOSQ9Y6W8 199 aa12.94□□□□□ -0.34
CCDC171-206ENST00000474193 TRAV4A0A0B4J268 109 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms