RNA–Protein interactions for RNA: ENST00000469334.5

SMARCE1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,128 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-207ENST00000469334 CNTFRP26992 372 aa6.87□□□□□ -1.31
SMARCE1-207ENST00000469334 DLX6P56179 175 aa6.87□□□□□ -1.31
SMARCE1-207ENST00000469334 MUSTN1Q8IVN3 82 aa6.87□□□□□ -1.31
SMARCE1-207ENST00000469334 C11orf21Q9P2W6 132 aa6.87□□□□□ -1.31
SMARCE1-207ENST00000469334 LINC00527Q9UJ94 153 aa6.87□□□□□ -1.31
SMARCE1-207ENST00000469334 IGIPA6NJ69 53 aa6.86□□□□□ -1.31
SMARCE1-207ENST00000469334 RNF223E7ERA6 249 aa6.86□□□□□ -1.31
SMARCE1-207ENST00000469334 MED14OSP0DP75 135 aa6.86□□□□□ -1.31
SMARCE1-207ENST00000469334 ZNF876PQ49A33 203 aa6.86□□□□□ -1.31
SMARCE1-207ENST00000469334 SDIM1Q6ZPB5 146 aa6.86□□□□□ -1.31
SMARCE1-207ENST00000469334 IGHV3-72A0A0B4J1Y9 119 aa6.86□□□□□ -1.31
SMARCE1-207ENST00000469334 ASCL5Q7RTU5 278 aa6.86□□□□□ -1.31
SMARCE1-207ENST00000469334 C5orf38Q86SI9 138 aa6.86□□□□□ -1.31
SMARCE1-207ENST00000469334 C14orf178Q8N769 122 aaPredicted RBP6.86□□□□□ -1.31
SMARCE1-207ENST00000469334 DUX3Q96PT4 197 aa6.86□□□□□ -1.31
SMARCE1-207ENST00000469334 EDA2RQ9HAV5 297 aa6.86□□□□□ -1.31
SMARCE1-207ENST00000469334 SMAD5-AS1Q9Y6J3 95 aa6.86□□□□□ -1.31
SMARCE1-207ENST00000469334 CACNA1GO43497 2377 aa6.85□□□□□ -1.31
SMARCE1-207ENST00000469334 IGHV1-3A0A0C4DH29 117 aa6.85□□□□□ -1.31
SMARCE1-207ENST00000469334 OVOL1O14753 267 aa6.85□□□□□ -1.31
SMARCE1-207ENST00000469334 NDUFB3O43676 98 aa6.85□□□□□ -1.31
SMARCE1-207ENST00000469334 TSHBP01222 138 aa6.85□□□□□ -1.31
SMARCE1-207ENST00000469334 IGHV1-8P0DP01 117 aa6.85□□□□□ -1.31
SMARCE1-207ENST00000469334 AGPAT4-IT1Q9H0P7 198 aa6.85□□□□□ -1.31
SMARCE1-207ENST00000469334 COL27A1Q8IZC6 1860 aaPredicted RBP6.85□□□□□ -1.31
SMARCE1-207ENST00000469334 SPTBN5Q9NRC6 3674 aaKnown RBP6.85□□□□□ -1.31
SMARCE1-207ENST00000469334 TRACP01848 142 aa6.85□□□□□ -1.31
SMARCE1-207ENST00000469334 HIST1H4AP62805 103 aaKnown RBP6.85□□□□□ -1.31
SMARCE1-207ENST00000469334 CEMP1Q6PRD7 247 aaPredicted RBP6.85□□□□□ -1.31
SMARCE1-207ENST00000469334 C2orf48Q96LS8 159 aa6.85□□□□□ -1.31
SMARCE1-207ENST00000469334 BEX4Q9NWD9 120 aaPredicted RBP6.85□□□□□ -1.31
SMARCE1-207ENST00000469334 TP53TG1Q9Y2A0 90 aa6.85□□□□□ -1.31
SMARCE1-207ENST00000469334 LENEPQ9Y5L5 61 aa6.85□□□□□ -1.31
SMARCE1-207ENST00000469334 F5H768 121 aa6.84□□□□□ -1.31
SMARCE1-207ENST00000469334 M0R1B8 84 aa6.84□□□□□ -1.31
SMARCE1-207ENST00000469334 IGHV1-69P01742 117 aa6.84□□□□□ -1.31
SMARCE1-207ENST00000469334 RPL39LQ96EH5 51 aaKnown RBP6.84□□□□□ -1.31
SMARCE1-207ENST00000469334 PEMTQ9UBM1 199 aa6.84□□□□□ -1.31
SMARCE1-207ENST00000469334 IGLV11-55A0A075B6I3 123 aa6.83□□□□□ -1.32
SMARCE1-207ENST00000469334 ZNF22P17026 224 aaPredicted RBP6.83□□□□□ -1.32
SMARCE1-207ENST00000469334 MALRD1Q5VYJ5 2156 aa6.83□□□□□ -1.32
SMARCE1-207ENST00000469334 C9orf47Q6ZRZ4 202 aa6.83□□□□□ -1.32
SMARCE1-207ENST00000469334 MSRB2Q9Y3D2 182 aa6.83□□□□□ -1.32
SMARCE1-207ENST00000469334 C9orf106Q8NAJ2 232 aa6.83□□□□□ -1.32
SMARCE1-207ENST00000469334 KLK5Q9Y337 293 aaPredicted RBP6.83□□□□□ -1.32
SMARCE1-207ENST00000469334 IGHV4OR15-8A0A075B7B6 117 aa6.82□□□□□ -1.32
SMARCE1-207ENST00000469334 A0A087WW49 117 aa6.82□□□□□ -1.32
SMARCE1-207ENST00000469334 PRAC2D3DTV9 90 aa6.82□□□□□ -1.32
SMARCE1-207ENST00000469334 F8W735 103 aaPredicted RBP6.82□□□□□ -1.32
SMARCE1-207ENST00000469334 CDX4O14627 284 aaPredicted RBP6.82□□□□□ -1.32
SMARCE1-207ENST00000469334 IGLV1-47P01700 117 aa6.82□□□□□ -1.32
SMARCE1-207ENST00000469334 LOXP28300 417 aaPredicted RBP6.82□□□□□ -1.32
SMARCE1-207ENST00000469334 UBE2E1P51965 193 aa6.82□□□□□ -1.32
SMARCE1-207ENST00000469334 KIR2DL5BQ8NHK3 375 aa6.82□□□□□ -1.32
SMARCE1-207ENST00000469334 DCANP1Q8TF63 244 aa6.82□□□□□ -1.32
SMARCE1-207ENST00000469334 DPH3Q96FX2 82 aa6.82□□□□□ -1.32
SMARCE1-207ENST00000469334 DYNLRB1Q9NP97 96 aa6.82□□□□□ -1.32
SMARCE1-207ENST00000469334 A0A0J9YXY3 114 aa6.82□□□□□ -1.32
SMARCE1-207ENST00000469334 UCNP55089 124 aa6.82□□□□□ -1.32
SMARCE1-207ENST00000469334 IGFL4Q6B9Z1 124 aa6.82□□□□□ -1.32
SMARCE1-207ENST00000469334 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.82□□□□□ -1.32
SMARCE1-207ENST00000469334 DAND5Q8N907 189 aa6.82□□□□□ -1.32
SMARCE1-207ENST00000469334 KAAG1Q9UBP8 84 aa6.82□□□□□ -1.32
SMARCE1-207ENST00000469334 FAM186AA6NE01 2351 aa6.81□□□□□ -1.32
SMARCE1-207ENST00000469334 BUB1B-PAK6H3BSN5 160 aa6.81□□□□□ -1.32
SMARCE1-207ENST00000469334 VCYO14598 125 aa6.81□□□□□ -1.32
SMARCE1-207ENST00000469334 MGPP08493 103 aa6.81□□□□□ -1.32
SMARCE1-207ENST00000469334 GPHB5Q86YW7 130 aa6.81□□□□□ -1.32
SMARCE1-207ENST00000469334 FANCD2OSQ96PS1 177 aa6.81□□□□□ -1.32
SMARCE1-207ENST00000469334 ZFAND3Q9H8U3 227 aa6.81□□□□□ -1.32
SMARCE1-207ENST00000469334 POLR2KP53803 58 aaKnown RBP6.8□□□□□ -1.32
SMARCE1-207ENST00000469334 SMCR5Q8TEV8 140 aa6.8□□□□□ -1.32
SMARCE1-207ENST00000469334 TMEM178BH3BS89 294 aa6.8□□□□□ -1.32
SMARCE1-207ENST00000469334 NBR2O15453 112 aa6.8□□□□□ -1.32
SMARCE1-207ENST00000469334 NXPH4O95158 308 aa6.8□□□□□ -1.32
SMARCE1-207ENST00000469334 CLEC2BQ92478 149 aa6.8□□□□□ -1.32
SMARCE1-207ENST00000469334 LITAFQ99732 161 aa6.8□□□□□ -1.32
SMARCE1-207ENST00000469334 PHLDA3Q9Y5J5 127 aa6.8□□□□□ -1.32
SMARCE1-207ENST00000469334 I3L3M4 83 aa6.79□□□□□ -1.32
SMARCE1-207ENST00000469334 ZNF883P0CG24 379 aa6.79□□□□□ -1.32
SMARCE1-207ENST00000469334 RHOHQ15669 191 aa6.79□□□□□ -1.32
SMARCE1-207ENST00000469334 MIAQ16674 131 aa6.79□□□□□ -1.32
SMARCE1-207ENST00000469334 NUP37Q8NFH4 326 aa6.79□□□□□ -1.32
SMARCE1-207ENST00000469334 NPBQ8NG41 125 aa6.79□□□□□ -1.32
SMARCE1-207ENST00000469334 TRAV21A0A0B4J279 112 aa6.79□□□□□ -1.32
SMARCE1-207ENST00000469334 hADV29S1A0JD25 119 aa6.79□□□□□ -1.32
SMARCE1-207ENST00000469334 INAFM2P0DMQ5 153 aa6.79□□□□□ -1.32
SMARCE1-207ENST00000469334 S100A4P26447 101 aaKnown RBP6.79□□□□□ -1.32
SMARCE1-207ENST00000469334 CCL8P80075 99 aa6.79□□□□□ -1.32
SMARCE1-207ENST00000469334 RPL18AQ02543 176 aaKnown RBP6.79□□□□□ -1.32
SMARCE1-207ENST00000469334 PMS2CLQ68D20 193 aa6.79□□□□□ -1.32
SMARCE1-207ENST00000469334 TMEM61Q8N0U2 210 aa6.79□□□□□ -1.32
SMARCE1-207ENST00000469334 RNF182Q8N6D2 247 aa6.79□□□□□ -1.32
SMARCE1-207ENST00000469334 PRSS33Q8NF86 280 aa6.79□□□□□ -1.32
SMARCE1-207ENST00000469334 DUX5Q96PT3 197 aa6.79□□□□□ -1.32
SMARCE1-207ENST00000469334 TIMM21Q9BVV7 248 aa6.79□□□□□ -1.32
SMARCE1-207ENST00000469334 BUB3O43684 328 aa6.78□□□□□ -1.32
SMARCE1-207ENST00000469334 TIMM17BO60830 172 aa6.78□□□□□ -1.32
SMARCE1-207ENST00000469334 CTSGP08311 255 aa6.78□□□□□ -1.32
SMARCE1-207ENST00000469334 NSUN5P1Q3KNT7 163 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms