RNA–Protein interactions for RNA: ENST00000465209.1

COL11A1-207, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 2

Gene COL11A1, Length 297 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-207ENST00000465209 SMIM3Q9BZL3 60 aa7.16□□□□□ -1.26
COL11A1-207ENST00000465209 TNXBP22105 4242 aa7.16□□□□□ -1.26
COL11A1-207ENST00000465209 SERTM2A0A1B0GWG4 89 aa7.15□□□□□ -1.26
COL11A1-207ENST00000465209 HMGB3O15347 200 aaKnown RBP7.15□□□□□ -1.26
COL11A1-207ENST00000465209 TCRAP04437 139 aa7.15□□□□□ -1.26
COL11A1-207ENST00000465209 CYCSP99999 105 aaKnown RBP7.15□□□□□ -1.26
COL11A1-207ENST00000465209 SERTAD4-AS1Q5TG53 156 aa7.15□□□□□ -1.26
COL11A1-207ENST00000465209 MZT2BQ6NZ67 158 aa7.15□□□□□ -1.26
COL11A1-207ENST00000465209 ZFP2Q6ZN57 461 aa7.15□□□□□ -1.26
COL11A1-207ENST00000465209 BAALCQ8WXS3 180 aa7.15□□□□□ -1.26
COL11A1-207ENST00000465209 CHAC1Q9BUX1 264 aa7.15□□□□□ -1.26
COL11A1-207ENST00000465209 IGKV3D-20A0A0C4DH25 116 aa7.14□□□□□ -1.27
COL11A1-207ENST00000465209 RNF222A6NCQ9 220 aa7.14□□□□□ -1.27
COL11A1-207ENST00000465209 GAGE12JA6NER3 117 aa7.14□□□□□ -1.27
COL11A1-207ENST00000465209 GGTLC3B5MD39 225 aa7.14□□□□□ -1.27
COL11A1-207ENST00000465209 TAAR5O14804 337 aa7.14□□□□□ -1.27
COL11A1-207ENST00000465209 STAG3L2P0CL84 134 aa7.14□□□□□ -1.27
COL11A1-207ENST00000465209 STAG3L3P0CL85 134 aa7.14□□□□□ -1.27
COL11A1-207ENST00000465209 ARL14EPLP0DKL9 152 aa7.14□□□□□ -1.27
COL11A1-207ENST00000465209 RPL12P30050 165 aaKnown RBP7.14□□□□□ -1.27
COL11A1-207ENST00000465209 IFITM3Q01628 133 aa7.14□□□□□ -1.27
COL11A1-207ENST00000465209 GAGE1Q13065 139 aa7.14□□□□□ -1.27
COL11A1-207ENST00000465209 GAGE4Q13068 117 aa7.14□□□□□ -1.27
COL11A1-207ENST00000465209 GAGE5Q13069 117 aa7.14□□□□□ -1.27
COL11A1-207ENST00000465209 ACOT6Q3I5F7 207 aaPredicted RBP7.14□□□□□ -1.27
COL11A1-207ENST00000465209 GAGE13Q4V321 117 aa7.14□□□□□ -1.27
COL11A1-207ENST00000465209 PIK3CD-AS1Q5SR53 167 aa7.14□□□□□ -1.27
COL11A1-207ENST00000465209 C5orf17Q8NAS9 161 aa7.14□□□□□ -1.27
COL11A1-207ENST00000465209 CIRBP-AS1Q8TBR5 109 aa7.14□□□□□ -1.27
COL11A1-207ENST00000465209 PSG8Q9UQ74 426 aa7.14□□□□□ -1.27
COL11A1-207ENST00000465209 OXTP01178 125 aa7.13□□□□□ -1.27
COL11A1-207ENST00000465209 ATRAIDQ6UW56 229 aa7.13□□□□□ -1.27
COL11A1-207ENST00000465209 LINC00299Q6ZSB3 139 aa7.13□□□□□ -1.27
COL11A1-207ENST00000465209 C14orf178Q8N769 122 aaPredicted RBP7.13□□□□□ -1.27
COL11A1-207ENST00000465209 CYB561D1Q8N8Q1 229 aa7.13□□□□□ -1.27
COL11A1-207ENST00000465209 SCGB1C1Q8TD33 95 aa7.13□□□□□ -1.27
COL11A1-207ENST00000465209 NDFIP1Q9BT67 221 aa7.13□□□□□ -1.27
COL11A1-207ENST00000465209 SAMD10Q9BYL1 202 aa7.13□□□□□ -1.27
COL11A1-207ENST00000465209 JPT2Q9H910 190 aa7.13□□□□□ -1.27
COL11A1-207ENST00000465209 A0A1W2PPV4 95 aa7.12□□□□□ -1.27
COL11A1-207ENST00000465209 FLI1Q01543 452 aaPredicted RBP7.12□□□□□ -1.27
COL11A1-207ENST00000465209 TOR2AQ5JU69 321 aa7.12□□□□□ -1.27
COL11A1-207ENST00000465209 NIT1Q86X76 327 aa7.12□□□□□ -1.27
COL11A1-207ENST00000465209 OR10G9Q8NGN4 311 aa7.12□□□□□ -1.27
COL11A1-207ENST00000465209 OR10G7Q8NGN6 311 aa7.12□□□□□ -1.27
COL11A1-207ENST00000465209 OR2G3Q8NGZ4 309 aa7.12□□□□□ -1.27
COL11A1-207ENST00000465209 ENKURQ8TC29 256 aa7.12□□□□□ -1.27
COL11A1-207ENST00000465209 MARVELD1Q9BSK0 173 aa7.12□□□□□ -1.27
COL11A1-207ENST00000465209 COX11Q9Y6N1 276 aa7.12□□□□□ -1.27
COL11A1-207ENST00000465209 A8MWV9 139 aa7.11□□□□□ -1.27
COL11A1-207ENST00000465209 INMT-MINDY4F8WBC2 141 aa7.11□□□□□ -1.27
COL11A1-207ENST00000465209 UPK1BO75841 260 aa7.11□□□□□ -1.27
COL11A1-207ENST00000465209 IGLV2-8P01709 118 aa7.11□□□□□ -1.27
COL11A1-207ENST00000465209 PET100P0DJ07 73 aa7.11□□□□□ -1.27
COL11A1-207ENST00000465209 GCHFRP30047 84 aa7.11□□□□□ -1.27
COL11A1-207ENST00000465209 CDC34P49427 236 aaPredicted RBP7.11□□□□□ -1.27
COL11A1-207ENST00000465209 HNRNPA3P51991 378 aaKnown RBP7.11□□□□□ -1.27
COL11A1-207ENST00000465209 LRP2P98164 4655 aa7.11□□□□□ -1.27
COL11A1-207ENST00000465209 SMUG1Q53HV7 270 aa7.11□□□□□ -1.27
COL11A1-207ENST00000465209 Q8N976 141 aa7.11□□□□□ -1.27
COL11A1-207ENST00000465209 SYT8Q8NBV8 401 aa7.11□□□□□ -1.27
COL11A1-207ENST00000465209 OR2T35Q8NGX2 323 aa7.11□□□□□ -1.27
COL11A1-207ENST00000465209 EPDR1Q9UM22 224 aa7.11□□□□□ -1.27
COL11A1-207ENST00000465209 A0A087WWC5 75 aa7.1□□□□□ -1.27
COL11A1-207ENST00000465209 RBFOX3A6NFN3 312 aa7.1□□□□□ -1.27
COL11A1-207ENST00000465209 DMRTA1Q5VZB9 504 aa7.1□□□□□ -1.27
COL11A1-207ENST00000465209 PRNTQ86SH4 94 aa7.1□□□□□ -1.27
COL11A1-207ENST00000465209 RAB24Q969Q5 203 aa7.1□□□□□ -1.27
COL11A1-207ENST00000465209 SH3BGRL3Q9H299 93 aa7.1□□□□□ -1.27
COL11A1-207ENST00000465209 IL36BQ9NZH7 164 aa7.1□□□□□ -1.27
COL11A1-207ENST00000465209 NDUFA13Q9P0J0 144 aa7.1□□□□□ -1.27
COL11A1-207ENST00000465209 IGKV2D-24A0A075B6R9 120 aa7.09□□□□□ -1.27
COL11A1-207ENST00000465209 FGF8P55075 233 aaPredicted RBP7.09□□□□□ -1.27
COL11A1-207ENST00000465209 SUMO1P63165 101 aaKnown RBP7.09□□□□□ -1.27
COL11A1-207ENST00000465209 ZFP69Q49AA0 526 aa7.09□□□□□ -1.27
COL11A1-207ENST00000465209 DNLZQ5SXM8 178 aa7.09□□□□□ -1.27
COL11A1-207ENST00000465209 S100ZQ8WXG8 99 aa7.09□□□□□ -1.27
COL11A1-207ENST00000465209 CHCHD7Q9BUK0 85 aa7.09□□□□□ -1.27
COL11A1-207ENST00000465209 KLK12Q9UKR0 248 aa7.09□□□□□ -1.27
COL11A1-207ENST00000465209 ARL2-SNX15V9GYD0 113 aa7.09□□□□□ -1.27
COL11A1-207ENST00000465209 H3BVH4 76 aa7.08□□□□□ -1.28
COL11A1-207ENST00000465209 K7EQM0 130 aa7.08□□□□□ -1.28
COL11A1-207ENST00000465209 CRIP1P50238 77 aa7.08□□□□□ -1.28
COL11A1-207ENST00000465209 LGALSLQ3ZCW2 172 aaPredicted RBP7.08□□□□□ -1.28
COL11A1-207ENST00000465209 RMI2Q96E14 147 aa7.08□□□□□ -1.28
COL11A1-207ENST00000465209 DAZAP1Q96EP5 407 aaKnown RBP7.08□□□□□ -1.28
COL11A1-207ENST00000465209 PSMG3Q9BT73 122 aaPredicted RBP7.08□□□□□ -1.28
COL11A1-207ENST00000465209 PLA2G2DQ9UNK4 145 aa7.08□□□□□ -1.28
COL11A1-207ENST00000465209 RNF213Q63HN8 5207 aa7.08□□□□□ -1.28
COL11A1-207ENST00000465209 TRAV34A0A0B4J273 112 aa7.07□□□□□ -1.28
COL11A1-207ENST00000465209 RHODO00212 210 aa7.07□□□□□ -1.28
COL11A1-207ENST00000465209 MT1HL1P0DM35 61 aa7.07□□□□□ -1.28
COL11A1-207ENST00000465209 ATP6V0CP27449 155 aa7.07□□□□□ -1.28
COL11A1-207ENST00000465209 ASIPP42127 132 aa7.07□□□□□ -1.28
COL11A1-207ENST00000465209 SAPCD1Q5SSQ6 148 aa7.07□□□□□ -1.28
COL11A1-207ENST00000465209 COX8CQ7Z4L0 72 aa7.07□□□□□ -1.28
COL11A1-207ENST00000465209 Q86TA4 180 aa7.07□□□□□ -1.28
COL11A1-207ENST00000465209 HSD17B11Q8NBQ5 300 aa7.07□□□□□ -1.28
COL11A1-207ENST00000465209 UBE2WQ96B02 151 aa7.07□□□□□ -1.28
COL11A1-207ENST00000465209 TMEM167BQ9NRX6 74 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms