RNA–Protein interactions for RNA: ENST00000454555.2

LINC00343-203, long intergenic non-protein coding RNA 343, humanhuman

TSL 2 BASIC

Gene LINC00343, Length 1,765 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-203ENST00000454555 A0A087WX48 190 aa10.12□□□□□ -0.79
LINC00343-203ENST00000454555 IGKV3D-20A0A0C4DH25 116 aa10.12□□□□□ -0.79
LINC00343-203ENST00000454555 IGHV4-59P01825 116 aa10.12□□□□□ -0.79
LINC00343-203ENST00000454555 HLA-DMBP28068 263 aa10.12□□□□□ -0.79
LINC00343-203ENST00000454555 FXYD7P58549 80 aa10.12□□□□□ -0.79
LINC00343-203ENST00000454555 CEND1Q8N111 149 aa10.12□□□□□ -0.79
LINC00343-203ENST00000454555 U3KQE9 123 aa10.12□□□□□ -0.79
LINC00343-203ENST00000454555 IGHV7-4-1A0A0J9YVY3 117 aa10.11□□□□□ -0.79
LINC00343-203ENST00000454555 A6NDX4 124 aa10.11□□□□□ -0.79
LINC00343-203ENST00000454555 LINC01549A6NIU2 74 aa10.11□□□□□ -0.79
LINC00343-203ENST00000454555 HOXA3O43365 443 aaPredicted RBP10.11□□□□□ -0.79
LINC00343-203ENST00000454555 ZNF207O43670 478 aaKnown RBP10.11□□□□□ -0.79
LINC00343-203ENST00000454555 CLEC3BP05452 202 aa10.11□□□□□ -0.79
LINC00343-203ENST00000454555 MED14OSP0DP75 135 aa10.11□□□□□ -0.79
LINC00343-203ENST00000454555 GCSHP23434 173 aa10.11□□□□□ -0.79
LINC00343-203ENST00000454555 ERCC8Q13216 396 aa10.11□□□□□ -0.79
LINC00343-203ENST00000454555 ORMDL2Q53FV1 153 aa10.11□□□□□ -0.79
LINC00343-203ENST00000454555 ZC2HC1BQ5TFG8 222 aa10.11□□□□□ -0.79
LINC00343-203ENST00000454555 NRACQ8N912 160 aa10.11□□□□□ -0.79
LINC00343-203ENST00000454555 AGPAT4-IT1Q9H0P7 198 aa10.11□□□□□ -0.79
LINC00343-203ENST00000454555 CLPSL1A2RUU4 121 aa10.11□□□□□ -0.79
LINC00343-203ENST00000454555 PPP1R17O96001 155 aa10.11□□□□□ -0.79
LINC00343-203ENST00000454555 HILS1P60008 231 aa10.11□□□□□ -0.79
LINC00343-203ENST00000454555 VPREB3Q9UKI3 123 aa10.11□□□□□ -0.79
LINC00343-203ENST00000454555 FN1P02751 2386 aaKnown RBP10.1□□□□□ -0.79
LINC00343-203ENST00000454555 PRAC2D3DTV9 90 aa10.1□□□□□ -0.79
LINC00343-203ENST00000454555 SPANXN1Q5VSR9 72 aa10.1□□□□□ -0.79
LINC00343-203ENST00000454555 IGFL4Q6B9Z1 124 aa10.1□□□□□ -0.79
LINC00343-203ENST00000454555 RAB37Q96AX2 223 aa10.1□□□□□ -0.79
LINC00343-203ENST00000454555 C20orf78Q9BR46 151 aa10.1□□□□□ -0.79
LINC00343-203ENST00000454555 IGKV2D-26A0A0A0MRZ7 120 aa10.09□□□□□ -0.79
LINC00343-203ENST00000454555 FAM223BA6NKX1 122 aa10.09□□□□□ -0.79
LINC00343-203ENST00000454555 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.09□□□□□ -0.79
LINC00343-203ENST00000454555 ATP6V0E1O15342 81 aa10.09□□□□□ -0.79
LINC00343-203ENST00000454555 FXYD2P54710 66 aa10.09□□□□□ -0.79
LINC00343-203ENST00000454555 C8orf86Q6ZUL3 223 aa10.09□□□□□ -0.79
LINC00343-203ENST00000454555 FAM223AQ8IWN6 122 aa10.09□□□□□ -0.79
LINC00343-203ENST00000454555 PHLDA1Q8WV24 401 aaPredicted RBP10.09□□□□□ -0.79
LINC00343-203ENST00000454555 LINC00477Q96M19 166 aa10.09□□□□□ -0.79
LINC00343-203ENST00000454555 CCDC140Q96MF4 163 aa10.09□□□□□ -0.79
LINC00343-203ENST00000454555 TRAV8-2A0A0B4J237 113 aa10.09□□□□□ -0.79
LINC00343-203ENST00000454555 TRBV7-9A0A0J9YWB2 115 aa10.09□□□□□ -0.79
LINC00343-203ENST00000454555 DNAJC9-AS1A6NH13 148 aa10.09□□□□□ -0.79
LINC00343-203ENST00000454555 F8VRH5 84 aa10.09□□□□□ -0.79
LINC00343-203ENST00000454555 F8W1H4 67 aa10.09□□□□□ -0.79
LINC00343-203ENST00000454555 H7C1H1 209 aa10.09□□□□□ -0.79
LINC00343-203ENST00000454555 M0R381 172 aa10.09□□□□□ -0.79
LINC00343-203ENST00000454555 CRIP2P52943 208 aaPredicted RBP10.09□□□□□ -0.79
LINC00343-203ENST00000454555 LY6EQ16553 131 aa10.09□□□□□ -0.79
LINC00343-203ENST00000454555 ECSCRQ19T08 205 aa10.09□□□□□ -0.79
LINC00343-203ENST00000454555 WFDC3Q8IUB2 231 aa10.09□□□□□ -0.79
LINC00343-203ENST00000454555 SMIM2Q9BVW6 85 aa10.09□□□□□ -0.79
LINC00343-203ENST00000454555 ESM1Q9NQ30 184 aa10.09□□□□□ -0.79
LINC00343-203ENST00000454555 NSD1Q96L73 2696 aaPredicted RBP10.08□□□□□ -0.8
LINC00343-203ENST00000454555 J3QR89 54 aa10.08□□□□□ -0.8
LINC00343-203ENST00000454555 SAP30O75446 220 aa10.08□□□□□ -0.8
LINC00343-203ENST00000454555 PRB4P10163 310 aaPredicted RBP10.08□□□□□ -0.8
LINC00343-203ENST00000454555 RNF182Q8N6D2 247 aa10.08□□□□□ -0.8
LINC00343-203ENST00000454555 MRPL35Q9NZE8 188 aaKnown RBP10.08□□□□□ -0.8
LINC00343-203ENST00000454555 E9PLD3 99 aa10.07□□□□□ -0.8
LINC00343-203ENST00000454555 OVOL1O14753 267 aa10.07□□□□□ -0.8
LINC00343-203ENST00000454555 CLEC19AQ6UXS0 136 aa10.07□□□□□ -0.8
LINC00343-203ENST00000454555 GTSCR1Q86UQ5 136 aa10.07□□□□□ -0.8
LINC00343-203ENST00000454555 TMEM219Q86XT9 240 aa10.07□□□□□ -0.8
LINC00343-203ENST00000454555 C11orf21Q9P2W6 132 aa10.07□□□□□ -0.8
LINC00343-203ENST00000454555 MOB4Q9Y3A3 225 aa10.07□□□□□ -0.8
LINC00343-203ENST00000454555 UFC1Q9Y3C8 167 aa10.07□□□□□ -0.8
LINC00343-203ENST00000454555 TRAV21A0A0B4J279 112 aa10.06□□□□□ -0.8
LINC00343-203ENST00000454555 GAS8-AS1O95177 125 aa10.06□□□□□ -0.8
LINC00343-203ENST00000454555 BRI3O95415 125 aa10.06□□□□□ -0.8
LINC00343-203ENST00000454555 TRGV3P03979 118 aa10.06□□□□□ -0.8
LINC00343-203ENST00000454555 RNASE1P07998 156 aaKnown RBP10.06□□□□□ -0.8
LINC00343-203ENST00000454555 ATP5G2Q06055 141 aa10.06□□□□□ -0.8
LINC00343-203ENST00000454555 TOMM6Q96B49 74 aa10.06□□□□□ -0.8
LINC00343-203ENST00000454555 MXRA5Q9NR99 2828 aa10.06□□□□□ -0.8
LINC00343-203ENST00000454555 SCGB1A1P11684 91 aa10.06□□□□□ -0.8
LINC00343-203ENST00000454555 GATA1P15976 413 aaPredicted RBP10.06□□□□□ -0.8
LINC00343-203ENST00000454555 C16orf92Q96LL3 132 aa10.06□□□□□ -0.8
LINC00343-203ENST00000454555 DUX5Q96PT3 197 aa10.06□□□□□ -0.8
LINC00343-203ENST00000454555 DPH3P1Q9H4G8 78 aa10.06□□□□□ -0.8
LINC00343-203ENST00000454555 MTORP42345 2549 aa10.05□□□□□ -0.8
LINC00343-203ENST00000454555 A0A1B0GWB2 263 aa10.05□□□□□ -0.8
LINC00343-203ENST00000454555 PPIFP30405 207 aaKnown RBP10.05□□□□□ -0.8
LINC00343-203ENST00000454555 TCTAP57738 103 aa10.05□□□□□ -0.8
LINC00343-203ENST00000454555 FOXI2Q6ZQN5 318 aa10.05□□□□□ -0.8
LINC00343-203ENST00000454555 C5orf56Q8N8D9 126 aa10.05□□□□□ -0.8
LINC00343-203ENST00000454555 GLMPQ8WWB7 406 aa10.05□□□□□ -0.8
LINC00343-203ENST00000454555 NHP2Q9NX24 153 aaKnown RBP10.05□□□□□ -0.8
LINC00343-203ENST00000454555 IGHV3-35A0A0C4DH35 117 aa10.04□□□□□ -0.8
LINC00343-203ENST00000454555 OR11H12B2RN74 326 aa10.04□□□□□ -0.8
LINC00343-203ENST00000454555 SUMO2P61956 95 aaKnown RBP10.04□□□□□ -0.8
LINC00343-203ENST00000454555 RPL32P62910 135 aaKnown RBP10.04□□□□□ -0.8
LINC00343-203ENST00000454555 OR11H1Q8NG94 326 aa10.04□□□□□ -0.8
LINC00343-203ENST00000454555 OR10J6PQ8NGY7 276 aa10.04□□□□□ -0.8
LINC00343-203ENST00000454555 OR11H2Q8NH07 326 aa10.04□□□□□ -0.8
LINC00343-203ENST00000454555 ZFHX3Q15911 3703 aa10.04□□□□□ -0.8
LINC00343-203ENST00000454555 IGLL5B9A064 214 aa10.03□□□□□ -0.8
LINC00343-203ENST00000454555 H3BUA1 57 aa10.03□□□□□ -0.8
LINC00343-203ENST00000454555 PAPPA-AS1Q5QFB9 102 aa10.03□□□□□ -0.8
LINC00343-203ENST00000454555 APRG1Q8IVJ8 170 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms