RNA–Protein interactions for RNA: ENST00000454240.1

SMARCC1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 3

Gene SMARCC1, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-203ENST00000454240 FHL2Q14192 279 aa19.57■□□□□ 0.72
SMARCC1-203ENST00000454240 ZNF479Q96JC4 524 aa19.57■□□□□ 0.72
SMARCC1-203ENST00000454240 HYDINQ4G0P3 5121 aa19.57■□□□□ 0.72
SMARCC1-203ENST00000454240 RYR3Q15413 4870 aa19.56■□□□□ 0.72
SMARCC1-203ENST00000454240 C19orf71A6NCJ1 209 aa19.56■□□□□ 0.72
SMARCC1-203ENST00000454240 H3BNG1 76 aa19.56■□□□□ 0.72
SMARCC1-203ENST00000454240 H3BVH4 76 aa19.56■□□□□ 0.72
SMARCC1-203ENST00000454240 CXCL1P09341 107 aa19.56■□□□□ 0.72
SMARCC1-203ENST00000454240 ARMS2P0C7Q2 107 aa19.56■□□□□ 0.72
SMARCC1-203ENST00000454240 RPL19P84098 196 aaKnown RBP19.56■□□□□ 0.72
SMARCC1-203ENST00000454240 SRP19P09132 144 aaKnown RBP19.55■□□□□ 0.72
SMARCC1-203ENST00000454240 SFTA3P0C7M3 94 aa19.55■□□□□ 0.72
SMARCC1-203ENST00000454240 PIK3CD-AS1Q5SR53 167 aa19.55■□□□□ 0.72
SMARCC1-203ENST00000454240 OR4C5Q8NGB2 326 aa19.55■□□□□ 0.72
SMARCC1-203ENST00000454240 SCRT2Q9NQ03 307 aa19.55■□□□□ 0.72
SMARCC1-203ENST00000454240 RYR2Q92736 4967 aa19.55■□□□□ 0.72
SMARCC1-203ENST00000454240 A0A0J9YY99 117 aa19.54■□□□□ 0.72
SMARCC1-203ENST00000454240 OCC1Q8TAD7 63 aa19.54■□□□□ 0.72
SMARCC1-203ENST00000454240 VSIG2Q96IQ7 327 aa19.54■□□□□ 0.72
SMARCC1-203ENST00000454240 BIN3Q9NQY0 253 aa19.54■□□□□ 0.72
SMARCC1-203ENST00000454240 SLAQ13239 276 aa19.53■□□□□ 0.72
SMARCC1-203ENST00000454240 DAZAP1Q96EP5 407 aaKnown RBP19.53■□□□□ 0.72
SMARCC1-203ENST00000454240 PRO0255Q9UI72 69 aa19.53■□□□□ 0.72
SMARCC1-203ENST00000454240 RS1O15537 224 aa19.52■□□□□ 0.72
SMARCC1-203ENST00000454240 NUDT3O95989 172 aa19.52■□□□□ 0.72
SMARCC1-203ENST00000454240 P0DMU3 169 aa19.52■□□□□ 0.72
SMARCC1-203ENST00000454240 FAM231AP0DMU4 169 aa19.52■□□□□ 0.72
SMARCC1-203ENST00000454240 FAM231CP0DMU5 169 aa19.52■□□□□ 0.72
SMARCC1-203ENST00000454240 CEBPGP53567 150 aa19.52■□□□□ 0.72
SMARCC1-203ENST00000454240 HHLA3Q9XRX5 114 aa19.52■□□□□ 0.72
SMARCC1-203ENST00000454240 TRGV4A0A0C4DH28 118 aa19.51■□□□□ 0.71
SMARCC1-203ENST00000454240 MED14OSP0DP75 135 aa19.51■□□□□ 0.71
SMARCC1-203ENST00000454240 CRYBA4P53673 196 aa19.51■□□□□ 0.71
SMARCC1-203ENST00000454240 CFAP126Q5VTH2 177 aa19.51■□□□□ 0.71
SMARCC1-203ENST00000454240 KMT2AQ03164 3969 aa19.5■□□□□ 0.71
SMARCC1-203ENST00000454240 K7EN84 100 aa19.5■□□□□ 0.71
SMARCC1-203ENST00000454240 DMRTA1Q5VZB9 504 aa19.5■□□□□ 0.71
SMARCC1-203ENST00000454240 CIDEAO60543 219 aa19.49■□□□□ 0.71
SMARCC1-203ENST00000454240 SMDT1Q9H4I9 107 aa19.49■□□□□ 0.71
SMARCC1-203ENST00000454240 PHLDA3Q9Y5J5 127 aa19.49■□□□□ 0.71
SMARCC1-203ENST00000454240 C9JQL5 133 aa19.48■□□□□ 0.71
SMARCC1-203ENST00000454240 PAX4O43316 350 aa19.48■□□□□ 0.71
SMARCC1-203ENST00000454240 SRSF3P84103 164 aaKnown RBP19.48■□□□□ 0.71
SMARCC1-203ENST00000454240 IFITM2Q01629 132 aa19.48■□□□□ 0.71
SMARCC1-203ENST00000454240 PEA15Q15121 130 aa19.48■□□□□ 0.71
SMARCC1-203ENST00000454240 SYT8Q8NBV8 401 aa19.48■□□□□ 0.71
SMARCC1-203ENST00000454240 SMIM7Q9BQ49 75 aa19.48■□□□□ 0.71
SMARCC1-203ENST00000454240 SSBP4Q9BWG4 385 aaPredicted RBP19.48■□□□□ 0.71
SMARCC1-203ENST00000454240 LY96Q9Y6Y9 160 aa19.48■□□□□ 0.71
SMARCC1-203ENST00000454240 A8MWV9 139 aa19.47■□□□□ 0.71
SMARCC1-203ENST00000454240 P01737 135 aa19.47■□□□□ 0.71
SMARCC1-203ENST00000454240 RAB14P61106 215 aa19.47■□□□□ 0.71
SMARCC1-203ENST00000454240 NUDT10Q8NFP7 164 aa19.47■□□□□ 0.71
SMARCC1-203ENST00000454240 OR2D3Q8NGH3 330 aa19.47■□□□□ 0.71
SMARCC1-203ENST00000454240 NUDT11Q96G61 164 aa19.47■□□□□ 0.71
SMARCC1-203ENST00000454240 SNAI2O43623 268 aa19.46■□□□□ 0.71
SMARCC1-203ENST00000454240 RPS20P60866 119 aaKnown RBP19.46■□□□□ 0.71
SMARCC1-203ENST00000454240 A0A096LPF7 62 aa19.45■□□□□ 0.7
SMARCC1-203ENST00000454240 ZNF727A8MUV8 499 aa19.45■□□□□ 0.7
SMARCC1-203ENST00000454240 OR5AL1P0C617 328 aa19.45■□□□□ 0.7
SMARCC1-203ENST00000454240 GATA1P15976 413 aaPredicted RBP19.45■□□□□ 0.7
SMARCC1-203ENST00000454240 RNF212Q495C1 297 aa19.45■□□□□ 0.7
SMARCC1-203ENST00000454240 ZFP82Q8N141 532 aa19.45■□□□□ 0.7
SMARCC1-203ENST00000454240 JPT2Q9H910 190 aa19.45■□□□□ 0.7
SMARCC1-203ENST00000454240 RNASE7Q9H1E1 156 aaKnown RBP19.44■□□□□ 0.7
SMARCC1-203ENST00000454240 M0R381 172 aa19.43■□□□□ 0.7
SMARCC1-203ENST00000454240 GZMBP10144 247 aa19.43■□□□□ 0.7
SMARCC1-203ENST00000454240 DNAH6Q9C0G6 4158 aa19.43■□□□□ 0.7
SMARCC1-203ENST00000454240 NXPH4O95158 308 aa19.42■□□□□ 0.7
SMARCC1-203ENST00000454240 IGLC6P0CF74 106 aa19.42■□□□□ 0.7
SMARCC1-203ENST00000454240 CLLU1Q5K131 121 aa19.42■□□□□ 0.7
SMARCC1-203ENST00000454240 UFSP1Q6NVU6 142 aa19.42■□□□□ 0.7
SMARCC1-203ENST00000454240 ZFP2Q6ZN57 461 aa19.42■□□□□ 0.7
SMARCC1-203ENST00000454240 OR10AG1Q8NH19 301 aa19.42■□□□□ 0.7
SMARCC1-203ENST00000454240 SFRP2Q96HF1 295 aa19.42■□□□□ 0.7
SMARCC1-203ENST00000454240 IGHV3-73A0A0B4J1V6 119 aa19.41■□□□□ 0.7
SMARCC1-203ENST00000454240 XKRY2A2RUG3 117 aa19.41■□□□□ 0.7
SMARCC1-203ENST00000454240 FAM74A3Q4VXF1 159 aa19.41■□□□□ 0.7
SMARCC1-203ENST00000454240 LINC01551Q86U37 167 aa19.41■□□□□ 0.7
SMARCC1-203ENST00000454240 UBE2DNLQ8IWF7 75 aa19.41■□□□□ 0.7
SMARCC1-203ENST00000454240 SAMD10Q9BYL1 202 aa19.41■□□□□ 0.7
SMARCC1-203ENST00000454240 ICOSQ9Y6W8 199 aa19.41■□□□□ 0.7
SMARCC1-203ENST00000454240 FAM231DQ6ZW35 169 aa19.4■□□□□ 0.7
SMARCC1-203ENST00000454240 RPP21Q9H633 154 aaKnown RBP19.4■□□□□ 0.7
SMARCC1-203ENST00000454240 CCL18P55774 89 aa19.39■□□□□ 0.69
SMARCC1-203ENST00000454240 SLC25A29Q8N8R3 303 aa19.39■□□□□ 0.69
SMARCC1-203ENST00000454240 TRBV6-4A0A1B0GX49 114 aa19.38■□□□□ 0.69
SMARCC1-203ENST00000454240 K7EQD1 137 aa19.38■□□□□ 0.69
SMARCC1-203ENST00000454240 MRPL23Q16540 153 aaKnown RBP19.38■□□□□ 0.69
SMARCC1-203ENST00000454240 FER1L6-AS1Q8NA97 138 aa19.38■□□□□ 0.69
SMARCC1-203ENST00000454240 LINC00588Q9Y4M8 146 aa19.38■□□□□ 0.69
SMARCC1-203ENST00000454240 MUC21A0A0G2JKD1 596 aa19.37■□□□□ 0.69
SMARCC1-203ENST00000454240 MUC21A0A140T8X8 626 aa19.37■□□□□ 0.69
SMARCC1-203ENST00000454240 CRYGDP07320 174 aa19.37■□□□□ 0.69
SMARCC1-203ENST00000454240 GYPEP15421 78 aa19.37■□□□□ 0.69
SMARCC1-203ENST00000454240 FAM3BP58499 235 aaPredicted RBP19.37■□□□□ 0.69
SMARCC1-203ENST00000454240 ESRGQ1W209 222 aa19.37■□□□□ 0.69
SMARCC1-203ENST00000454240 TMEM241Q24JQ0 296 aa19.37■□□□□ 0.69
SMARCC1-203ENST00000454240 SPANXN1Q5VSR9 72 aa19.37■□□□□ 0.69
SMARCC1-203ENST00000454240 RHODO00212 210 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms