RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 CD7P09564 240 aa8.81□□□□□ -1
VTA1-203ENST00000452973 HTN1P15515 57 aa8.81□□□□□ -1
VTA1-203ENST00000452973 DMRTA1Q5VZB9 504 aa8.81□□□□□ -1
VTA1-203ENST00000452973 Q6ZSV7 163 aa8.81□□□□□ -1
VTA1-203ENST00000452973 OR2K2Q8NGT1 345 aa8.81□□□□□ -1
VTA1-203ENST00000452973 FAM19A4Q96LR4 140 aa8.81□□□□□ -1
VTA1-203ENST00000452973 K7EQG2 157 aa8.81□□□□□ -1
VTA1-203ENST00000452973 HBDP02042 147 aa8.81□□□□□ -1
VTA1-203ENST00000452973 LEPP41159 167 aa8.81□□□□□ -1
VTA1-203ENST00000452973 HNRNPA3P51991 378 aaKnown RBP8.81□□□□□ -1
VTA1-203ENST00000452973 ADAMTSL5Q6ZMM2 481 aa8.81□□□□□ -1
VTA1-203ENST00000452973 DEFB104AQ8WTQ1 72 aa8.8□□□□□ -1
VTA1-203ENST00000452973 ESM1Q9NQ30 184 aa8.8□□□□□ -1
VTA1-203ENST00000452973 CBY1Q9Y3M2 126 aa8.8□□□□□ -1
VTA1-203ENST00000452973 LINC01619G3V211 115 aa8.8□□□□□ -1
VTA1-203ENST00000452973 TCAPO15273 167 aa8.8□□□□□ -1
VTA1-203ENST00000452973 CACNG7P62955 275 aa8.8□□□□□ -1
VTA1-203ENST00000452973 PET117Q6UWS5 81 aa8.8□□□□□ -1
VTA1-203ENST00000452973 OR1N2Q8NGR9 330 aa8.8□□□□□ -1
VTA1-203ENST00000452973 NIPBLQ6KC79 2804 aaeCLIP8.8□□□□□ -11e-6■■■■■ 35.4
VTA1-203ENST00000452973 A0A0J9YX75 114 aa8.79□□□□□ -1
VTA1-203ENST00000452973 HSBP1L1C9JCN9 74 aa8.79□□□□□ -1
VTA1-203ENST00000452973 LGALS9O00182 355 aa8.79□□□□□ -1
VTA1-203ENST00000452973 RNASE3P12724 160 aaKnown RBP8.79□□□□□ -1
VTA1-203ENST00000452973 DLX4Q92988 240 aaPredicted RBP8.79□□□□□ -1
VTA1-203ENST00000452973 KNCNA6PVL3 124 aa8.79□□□□□ -1
VTA1-203ENST00000452973 JPT2Q9H910 190 aa8.79□□□□□ -1
VTA1-203ENST00000452973 KLLNB2CW77 178 aa8.79□□□□□ -1
VTA1-203ENST00000452973 Q8N2B8 174 aa8.79□□□□□ -1
VTA1-203ENST00000452973 MUC4Q99102 2169 aa8.78□□□□□ -1
VTA1-203ENST00000452973 DEFB131AP59861 70 aa8.78□□□□□ -1
VTA1-203ENST00000452973 SAMD13Q5VXD3 122 aa8.78□□□□□ -1
VTA1-203ENST00000452973 RNF152Q8N8N0 203 aa8.78□□□□□ -1
VTA1-203ENST00000452973 C2orf88Q9BSF0 95 aa8.78□□□□□ -1
VTA1-203ENST00000452973 HIVEP2P31629 2446 aa8.78□□□□□ -1
VTA1-203ENST00000452973 TMEM158Q8WZ71 300 aa8.78□□□□□ -1
VTA1-203ENST00000452973 IFI27L1Q96BM0 104 aa8.78□□□□□ -1
VTA1-203ENST00000452973 RPL39LQ96EH5 51 aaKnown RBP8.78□□□□□ -1
VTA1-203ENST00000452973 SMR3AQ99954 134 aa8.78□□□□□ -1
VTA1-203ENST00000452973 NXT2Q9NPJ8 142 aaKnown RBP8.78□□□□□ -1
VTA1-203ENST00000452973 C7orf71A4D174 169 aa8.77□□□□□ -1
VTA1-203ENST00000452973 LINC01545Q5VT33 79 aa8.77□□□□□ -1
VTA1-203ENST00000452973 TMEM61Q8N0U2 210 aa8.77□□□□□ -1
VTA1-203ENST00000452973 NRACQ8N912 160 aa8.77□□□□□ -1
VTA1-203ENST00000452973 OR9G4Q8NGQ1 327 aa8.77□□□□□ -1
VTA1-203ENST00000452973 IGHV4-4A0A075B6R2 117 aa8.77□□□□□ -1.01
VTA1-203ENST00000452973 A0A087WWL8 130 aa8.77□□□□□ -1.01
VTA1-203ENST00000452973 DYNLRB2Q8TF09 96 aa8.77□□□□□ -1.01
VTA1-203ENST00000452973 TSPOP30536 169 aa8.77□□□□□ -1.01
VTA1-203ENST00000452973 FAM74A4Q5TZK3 123 aa8.77□□□□□ -1.01
VTA1-203ENST00000452973 APRG1Q8IVJ8 170 aa8.77□□□□□ -1.01
VTA1-203ENST00000452973 C4orf3Q8WVX3 66 aa8.77□□□□□ -1.01
VTA1-203ENST00000452973 MDFICQ9P1T7 246 aa8.77□□□□□ -1.01
VTA1-203ENST00000452973 LAMTOR2Q9Y2Q5 125 aa8.77□□□□□ -1.01
VTA1-203ENST00000452973 GOLT1BQ9Y3E0 138 aa8.77□□□□□ -1.01
VTA1-203ENST00000452973 CDKN1BP46527 198 aa8.76□□□□□ -1.01
VTA1-203ENST00000452973 HINT1P49773 126 aaPredicted RBP8.76□□□□□ -1.01
VTA1-203ENST00000452973 DPH3P1Q9H4G8 78 aa8.76□□□□□ -1.01
VTA1-203ENST00000452973 F5H697 171 aa8.76□□□□□ -1.01
VTA1-203ENST00000452973 PRSS1P07477 247 aa8.76□□□□□ -1.01
VTA1-203ENST00000452973 LBHQ53QV2 105 aaPredicted RBP8.76□□□□□ -1.01
VTA1-203ENST00000452973 STPG4Q8N801 248 aa8.76□□□□□ -1.01
VTA1-203ENST00000452973 JMJD1CQ15652 2540 aa8.76□□□□□ -1.01
VTA1-203ENST00000452973 TRBV7-9A0A0J9YWB2 115 aa8.75□□□□□ -1.01
VTA1-203ENST00000452973 SMIM17P0DL12 118 aa8.75□□□□□ -1.01
VTA1-203ENST00000452973 KRTAP1-1Q07627 177 aa8.75□□□□□ -1.01
VTA1-203ENST00000452973 Q8N8P6 123 aa8.75□□□□□ -1.01
VTA1-203ENST00000452973 AP1S3Q96PC3 154 aa8.75□□□□□ -1.01
VTA1-203ENST00000452973 PEMTQ9UBM1 199 aa8.75□□□□□ -1.01
VTA1-203ENST00000452973 AKAP9Q99996 3911 aa8.75□□□□□ -1.01
VTA1-203ENST00000452973 PRM2P04554 102 aa8.75□□□□□ -1.01
VTA1-203ENST00000452973 CD28P10747 220 aa8.75□□□□□ -1.01
VTA1-203ENST00000452973 FCER1GP30273 86 aa8.75□□□□□ -1.01
VTA1-203ENST00000452973 Q8N1Y9 231 aa8.75□□□□□ -1.01
VTA1-203ENST00000452973 DKK2Q9UBU2 259 aa8.75□□□□□ -1.01
VTA1-203ENST00000452973 NEGR1Q7Z3B1 354 aa8.75□□□□□ -1.01
VTA1-203ENST00000452973 CD5LO43866 347 aa8.74□□□□□ -1.01
VTA1-203ENST00000452973 COTL1Q14019 142 aa8.74□□□□□ -1.01
VTA1-203ENST00000452973 TEX29Q8N6K0 151 aa8.74□□□□□ -1.01
VTA1-203ENST00000452973 RASL10AQ92737 203 aa8.74□□□□□ -1.01
VTA1-203ENST00000452973 ST20Q9HBF5 79 aa8.74□□□□□ -1.01
VTA1-203ENST00000452973 SCRT2Q9NQ03 307 aa8.74□□□□□ -1.01
VTA1-203ENST00000452973 LAGE3Q14657 143 aa8.74□□□□□ -1.01
VTA1-203ENST00000452973 TMEM86BQ8N661 226 aa8.74□□□□□ -1.01
VTA1-203ENST00000452973 SVIPQ8NHG7 77 aa8.74□□□□□ -1.01
VTA1-203ENST00000452973 MRAP2Q96G30 205 aa8.74□□□□□ -1.01
VTA1-203ENST00000452973 IGLV2-18A0A075B6J9 118 aa8.73□□□□□ -1.01
VTA1-203ENST00000452973 NUDT3O95989 172 aa8.73□□□□□ -1.01
VTA1-203ENST00000452973 CD300EQ496F6 205 aaPredicted RBP8.73□□□□□ -1.01
VTA1-203ENST00000452973 FOXI2Q6ZQN5 318 aa8.73□□□□□ -1.01
VTA1-203ENST00000452973 RAX2Q96IS3 184 aa8.73□□□□□ -1.01
VTA1-203ENST00000452973 CITED2Q99967 270 aaPredicted RBP8.73□□□□□ -1.01
VTA1-203ENST00000452973 DUSP14O95147 198 aaKnown RBP8.73□□□□□ -1.01
VTA1-203ENST00000452973 SUMO2P61956 95 aaKnown RBP8.73□□□□□ -1.01
VTA1-203ENST00000452973 SETXQ7Z333 2677 aaKnown RBP8.73□□□□□ -1.01
VTA1-203ENST00000452973 NUTF2P61970 127 aaKnown RBP8.73□□□□□ -1.01
VTA1-203ENST00000452973 SLC25A34Q6PIV7 304 aa8.73□□□□□ -1.01
VTA1-203ENST00000452973 FOXC2Q99958 501 aa8.73□□□□□ -1.01
VTA1-203ENST00000452973 SMIM2Q9BVW6 85 aa8.73□□□□□ -1.01
VTA1-203ENST00000452973 IGHV1OR15-1A0A075B7D0 117 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms