RNA–Protein interactions for RNA: ENST00000452013.5

COL8A1-203, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 2

Gene COL8A1, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-203ENST00000452013 NDFIP1Q9BT67 221 aa6.37□□□□□ -1.39
COL8A1-203ENST00000452013 DERL1Q9BUN8 251 aa6.37□□□□□ -1.39
COL8A1-203ENST00000452013 DKK2Q9UBU2 259 aa6.37□□□□□ -1.39
COL8A1-203ENST00000452013 V9GYV3 84 aa6.37□□□□□ -1.39
COL8A1-203ENST00000452013 TRAV10A0A0B4J240 114 aa6.36□□□□□ -1.39
COL8A1-203ENST00000452013 SMIM27A0A1W2PRY6 76 aa6.36□□□□□ -1.39
COL8A1-203ENST00000452013 FAM231BA6NCW3 169 aa6.36□□□□□ -1.39
COL8A1-203ENST00000452013 LYRM9A8MSI8 78 aa6.36□□□□□ -1.39
COL8A1-203ENST00000452013 ZNF324O75467 553 aaPredicted RBP6.36□□□□□ -1.39
COL8A1-203ENST00000452013 TCRAP04437 139 aa6.36□□□□□ -1.39
COL8A1-203ENST00000452013 RAB4AP20338 218 aa6.36□□□□□ -1.39
COL8A1-203ENST00000452013 TCTAP57738 103 aa6.36□□□□□ -1.39
COL8A1-203ENST00000452013 C12orf74Q32Q52 190 aa6.36□□□□□ -1.39
COL8A1-203ENST00000452013 PDZD11Q5EBL8 140 aa6.36□□□□□ -1.39
COL8A1-203ENST00000452013 CT83Q5H943 113 aa6.36□□□□□ -1.39
COL8A1-203ENST00000452013 FAM222AQ5U5X8 452 aa6.36□□□□□ -1.39
COL8A1-203ENST00000452013 ATP5L2Q7Z4Y8 100 aa6.36□□□□□ -1.39
COL8A1-203ENST00000452013 ZFAND2AQ8N6M9 145 aa6.36□□□□□ -1.39
COL8A1-203ENST00000452013 TMEM263Q8WUH6 116 aaKnown RBP6.36□□□□□ -1.39
COL8A1-203ENST00000452013 LINC00467Q9BRT7 94 aa6.36□□□□□ -1.39
COL8A1-203ENST00000452013 TIMM8BQ9Y5J9 83 aaPredicted RBP6.36□□□□□ -1.39
COL8A1-203ENST00000452013 TRBV6-1A0A0K0K1D8 114 aa6.35□□□□□ -1.39
COL8A1-203ENST00000452013 SNURFLB1AK76 121 aa6.35□□□□□ -1.39
COL8A1-203ENST00000452013 K7EN84 100 aa6.35□□□□□ -1.39
COL8A1-203ENST00000452013 PRM2P04554 102 aa6.35□□□□□ -1.39
COL8A1-203ENST00000452013 DAD1P61803 113 aa6.35□□□□□ -1.39
COL8A1-203ENST00000452013 GNG5P63218 68 aa6.35□□□□□ -1.39
COL8A1-203ENST00000452013 SAPCD1Q5SSQ6 148 aa6.35□□□□□ -1.39
COL8A1-203ENST00000452013 IBA57Q5T440 356 aaKnown RBP6.35□□□□□ -1.39
COL8A1-203ENST00000452013 Q6ZTC4 211 aa6.35□□□□□ -1.39
COL8A1-203ENST00000452013 Q8TAT8 98 aa6.35□□□□□ -1.39
COL8A1-203ENST00000452013 ATG101Q9BSB4 218 aa6.35□□□□□ -1.39
COL8A1-203ENST00000452013 C2orf88Q9BSF0 95 aa6.35□□□□□ -1.39
COL8A1-203ENST00000452013 NDUFAF3Q9BU61 184 aa6.35□□□□□ -1.39
COL8A1-203ENST00000452013 MRPL18Q9H0U6 180 aaKnown RBP6.35□□□□□ -1.39
COL8A1-203ENST00000452013 CELA1Q9UNI1 258 aa6.35□□□□□ -1.39
COL8A1-203ENST00000452013 PSG8Q9UQ74 426 aa6.35□□□□□ -1.39
COL8A1-203ENST00000452013 NBEAL2Q6ZNJ1 2754 aa6.35□□□□□ -1.39
COL8A1-203ENST00000452013 IGHV1OR15-1A0A075B7D0 117 aa6.34□□□□□ -1.39
COL8A1-203ENST00000452013 DEFB131BA0A096LNP1 70 aa6.34□□□□□ -1.39
COL8A1-203ENST00000452013 TRAV21A0A0B4J279 112 aa6.34□□□□□ -1.39
COL8A1-203ENST00000452013 CBY3A6NI87 242 aa6.34□□□□□ -1.39
COL8A1-203ENST00000452013 GGTLC3B5MD39 225 aa6.34□□□□□ -1.39
COL8A1-203ENST00000452013 PEX7O00628 323 aa6.34□□□□□ -1.39
COL8A1-203ENST00000452013 TMEM183BQ1AE95 376 aa6.34□□□□□ -1.39
COL8A1-203ENST00000452013 ANXA2RQ3ZCQ2 193 aa6.34□□□□□ -1.39
COL8A1-203ENST00000452013 FAM159AQ6UWV7 190 aa6.34□□□□□ -1.39
COL8A1-203ENST00000452013 RNASE8Q8TDE3 154 aaKnown RBP6.34□□□□□ -1.39
COL8A1-203ENST00000452013 FMC1Q96HJ9 113 aa6.34□□□□□ -1.39
COL8A1-203ENST00000452013 GFRA4Q9GZZ7 299 aa6.34□□□□□ -1.39
COL8A1-203ENST00000452013 NAT8BQ9UHF3 227 aa6.34□□□□□ -1.39
COL8A1-203ENST00000452013 NAGKQ9UJ70 344 aa6.34□□□□□ -1.39
COL8A1-203ENST00000452013 KLF12Q9Y4X4 402 aa6.34□□□□□ -1.39
COL8A1-203ENST00000452013 TRAV8-1A0A0A6YYK1 113 aa6.33□□□□□ -1.4
COL8A1-203ENST00000452013 IGLL5B9A064 214 aa6.33□□□□□ -1.4
COL8A1-203ENST00000452013 DEFB130BP0DP73 79 aa6.33□□□□□ -1.4
COL8A1-203ENST00000452013 DEFB130AP0DP74 79 aa6.33□□□□□ -1.4
COL8A1-203ENST00000452013 UBE2G1P62253 170 aa6.33□□□□□ -1.4
COL8A1-203ENST00000452013 Q6AWC8 147 aa6.33□□□□□ -1.4
COL8A1-203ENST00000452013 PRNTQ86SH4 94 aa6.33□□□□□ -1.4
COL8A1-203ENST00000452013 BAGE3Q86Y29 109 aa6.33□□□□□ -1.4
COL8A1-203ENST00000452013 BAGE2Q86Y30 109 aa6.33□□□□□ -1.4
COL8A1-203ENST00000452013 TMEM75Q8N9X5 138 aa6.33□□□□□ -1.4
COL8A1-203ENST00000452013 C14orf144Q96I85 54 aa6.33□□□□□ -1.4
COL8A1-203ENST00000452013 SGK494Q96LW2 274 aa6.33□□□□□ -1.4
COL8A1-203ENST00000452013 NOP10Q9NPE3 64 aaKnown RBP6.33□□□□□ -1.4
COL8A1-203ENST00000452013 PLAC8L1A1L4L8 177 aa6.32□□□□□ -1.4
COL8A1-203ENST00000452013 SCGB1D1O95968 90 aa6.32□□□□□ -1.4
COL8A1-203ENST00000452013 IGLV2-8P01709 118 aa6.32□□□□□ -1.4
COL8A1-203ENST00000452013 DAZ2Q13117 558 aaKnown RBP6.32□□□□□ -1.4
COL8A1-203ENST00000452013 PRR9Q5T870 116 aa6.32□□□□□ -1.4
COL8A1-203ENST00000452013 ZNF664Q8N3J9 261 aa6.32□□□□□ -1.4
COL8A1-203ENST00000452013 LINC00469Q8N7U9 141 aa6.32□□□□□ -1.4
COL8A1-203ENST00000452013 TSKUQ8WUA8 353 aa6.32□□□□□ -1.4
COL8A1-203ENST00000452013 KCNS1Q96KK3 526 aa6.32□□□□□ -1.4
COL8A1-203ENST00000452013 ZFP30Q9Y2G7 519 aa6.32□□□□□ -1.4
COL8A1-203ENST00000452013 TRGV11A0A075B6L2 103 aa6.31□□□□□ -1.4
COL8A1-203ENST00000452013 TRAV34A0A0B4J273 112 aa6.31□□□□□ -1.4
COL8A1-203ENST00000452013 LCE6AA0A183 80 aa6.31□□□□□ -1.4
COL8A1-203ENST00000452013 A0A1B0GW15 77 aa6.31□□□□□ -1.4
COL8A1-203ENST00000452013 C20orf202A1L168 122 aa6.31□□□□□ -1.4
COL8A1-203ENST00000452013 PGPEP1LA6NFU8 196 aa6.31□□□□□ -1.4
COL8A1-203ENST00000452013 A8MWL6 223 aa6.31□□□□□ -1.4
COL8A1-203ENST00000452013 IGLV2-11P01706 119 aa6.31□□□□□ -1.4
COL8A1-203ENST00000452013 APCSP02743 223 aa6.31□□□□□ -1.4
COL8A1-203ENST00000452013 ATP5G1P05496 136 aa6.31□□□□□ -1.4
COL8A1-203ENST00000452013 HTN3P15516 51 aa6.31□□□□□ -1.4
COL8A1-203ENST00000452013 MUC21Q5SSG8 566 aa6.31□□□□□ -1.4
COL8A1-203ENST00000452013 TEX43Q6ZNM6 134 aa6.31□□□□□ -1.4
COL8A1-203ENST00000452013 TMEM136Q6ZRR5 245 aa6.31□□□□□ -1.4
COL8A1-203ENST00000452013 LINC00479Q96M42 142 aa6.31□□□□□ -1.4
COL8A1-203ENST00000452013 SAMD10Q9BYL1 202 aa6.31□□□□□ -1.4
COL8A1-203ENST00000452013 IGHV4-4A0A075B6R2 117 aa6.3□□□□□ -1.4
COL8A1-203ENST00000452013 GAGE12BA1L429 117 aa6.3□□□□□ -1.4
COL8A1-203ENST00000452013 FABP5P3A8MUU1 101 aa6.3□□□□□ -1.4
COL8A1-203ENST00000452013 GAGE7O76087 117 aa6.3□□□□□ -1.4
COL8A1-203ENST00000452013 GAGE12FP0CL80 117 aa6.3□□□□□ -1.4
COL8A1-203ENST00000452013 GAGE12GP0CL81 117 aa6.3□□□□□ -1.4
COL8A1-203ENST00000452013 GAGE12IP0CL82 117 aa6.3□□□□□ -1.4
COL8A1-203ENST00000452013 MGST1P10620 155 aaKnown RBP6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms