RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 FAM110DQ8TAY7 271 aaPredicted RBP1.71□□□□□ -2.14
USP53-202ENST00000450251 XCL2Q9UBD3 114 aa1.71□□□□□ -2.14
USP53-202ENST00000450251 NAV2Q8IVL1 2488 aa1.71□□□□□ -2.14
USP53-202ENST00000450251 IGHV1-3A0A0C4DH29 117 aa1.71□□□□□ -2.14
USP53-202ENST00000450251 IGHV3-64DA0A0J9YX35 117 aa1.71□□□□□ -2.14
USP53-202ENST00000450251 WI2-2373I1.2A0A1W2PRP0 233 aa1.71□□□□□ -2.14
USP53-202ENST00000450251 B9A039 149 aa1.71□□□□□ -2.14
USP53-202ENST00000450251 C5orf67F2Z3F1 127 aa1.71□□□□□ -2.14
USP53-202ENST00000450251 ZNF672Q499Z4 452 aaPredicted RBP1.71□□□□□ -2.14
USP53-202ENST00000450251 RNF144BQ7Z419 303 aa1.71□□□□□ -2.14
USP53-202ENST00000450251 DEFB119Q8N690 84 aa1.71□□□□□ -2.14
USP53-202ENST00000450251 MPLKIPQ8TAP9 179 aa1.71□□□□□ -2.14
USP53-202ENST00000450251 CFHR4Q92496 578 aa1.71□□□□□ -2.14
USP53-202ENST00000450251 USMG5Q96IX5 58 aa1.71□□□□□ -2.14
USP53-202ENST00000450251 CNFNQ9BYD5 112 aa1.71□□□□□ -2.14
USP53-202ENST00000450251 SPTBN5Q9NRC6 3674 aaKnown RBP1.71□□□□□ -2.14
USP53-202ENST00000450251 TRBV7-6A0A0J9YX20 115 aa1.7□□□□□ -2.14
USP53-202ENST00000450251 C17orf100A8MU93 164 aa1.7□□□□□ -2.14
USP53-202ENST00000450251 H3BUA1 57 aa1.7□□□□□ -2.14
USP53-202ENST00000450251 PRYO14603 147 aa1.7□□□□□ -2.14
USP53-202ENST00000450251 RPL28P46779 137 aaKnown RBP1.7□□□□□ -2.14
USP53-202ENST00000450251 PAX8Q06710 450 aa1.7□□□□□ -2.14
USP53-202ENST00000450251 EBI3Q14213 229 aa1.7□□□□□ -2.14
USP53-202ENST00000450251 PMS2CLQ68D20 193 aa1.7□□□□□ -2.14
USP53-202ENST00000450251 C9orf47Q6ZRZ4 202 aa1.7□□□□□ -2.14
USP53-202ENST00000450251 STHQ8IWL8 128 aa1.7□□□□□ -2.14
USP53-202ENST00000450251 CD177Q8N6Q3 437 aa1.7□□□□□ -2.14
USP53-202ENST00000450251 CCL17Q92583 94 aa1.7□□□□□ -2.14
USP53-202ENST00000450251 LINC01600Q96MT4 127 aa1.7□□□□□ -2.14
USP53-202ENST00000450251 ODF3Q96PU9 254 aa1.7□□□□□ -2.14
USP53-202ENST00000450251 OPRPNQ99935 248 aaPredicted RBP1.7□□□□□ -2.14
USP53-202ENST00000450251 LIMD2Q9BT23 127 aa1.7□□□□□ -2.14
USP53-202ENST00000450251 IGHV4-4A0A075B6R2 117 aa1.7□□□□□ -2.14
USP53-202ENST00000450251 TRAV23DV6A0A075B6W5 121 aa1.7□□□□□ -2.14
USP53-202ENST00000450251 TMEM89A2RUT3 159 aa1.7□□□□□ -2.14
USP53-202ENST00000450251 ZNF561-AS1K7EIQ3 104 aa1.7□□□□□ -2.14
USP53-202ENST00000450251 PSPNO60542 156 aa1.7□□□□□ -2.14
USP53-202ENST00000450251 DEFB103AP81534 67 aa1.7□□□□□ -2.14
USP53-202ENST00000450251 ESRGQ1W209 222 aa1.7□□□□□ -2.14
USP53-202ENST00000450251 PRR15Q8IV56 129 aa1.7□□□□□ -2.14
USP53-202ENST00000450251 LEAP2Q969E1 77 aa1.7□□□□□ -2.14
USP53-202ENST00000450251 GAFA1Q96PS6 74 aa1.7□□□□□ -2.14
USP53-202ENST00000450251 TOMM7Q9P0U1 55 aa1.7□□□□□ -2.14
USP53-202ENST00000450251 TNRC6BQ9UPQ9 1833 aaKnown RBP1.7□□□□□ -2.14
USP53-202ENST00000450251 IGKV2D-26A0A0A0MRZ7 120 aa1.7□□□□□ -2.14
USP53-202ENST00000450251 K7ENP7 123 aa1.7□□□□□ -2.14
USP53-202ENST00000450251 IGLV2-14P01704 120 aa1.7□□□□□ -2.14
USP53-202ENST00000450251 IGLV3-19P01714 112 aa1.7□□□□□ -2.14
USP53-202ENST00000450251 CASC2Q6XLA1 102 aa1.7□□□□□ -2.14
USP53-202ENST00000450251 C1orf229Q6ZS94 237 aaPredicted RBP1.7□□□□□ -2.14
USP53-202ENST00000450251 MAPKAPK5-AS1Q8N8E1 139 aa1.7□□□□□ -2.14
USP53-202ENST00000450251 NKAPP1Q8N9T2 125 aa1.7□□□□□ -2.14
USP53-202ENST00000450251 Q8TAT8 98 aa1.7□□□□□ -2.14
USP53-202ENST00000450251 ZNF524Q96C55 264 aa1.7□□□□□ -2.14
USP53-202ENST00000450251 LAMA5O15230 3695 aa1.7□□□□□ -2.14
USP53-202ENST00000450251 EP300Q09472 2414 aaPredicted RBP1.7□□□□□ -2.14
USP53-202ENST00000450251 COL4A3Q01955 1670 aa1.7□□□□□ -2.14
USP53-202ENST00000450251 COL5A1P20908 1838 aaPredicted RBP1.7□□□□□ -2.14
USP53-202ENST00000450251 CGB1A6NKQ9 187 aa1.7□□□□□ -2.14
USP53-202ENST00000450251 GATA3P23771 443 aa1.7□□□□□ -2.14
USP53-202ENST00000450251 TIRAPP58753 221 aa1.7□□□□□ -2.14
USP53-202ENST00000450251 LOXL1Q08397 574 aaPredicted RBP1.7□□□□□ -2.14
USP53-202ENST00000450251 FAM19A3Q7Z5A8 133 aa1.7□□□□□ -2.14
USP53-202ENST00000450251 GGNQ86UU5 652 aa1.7□□□□□ -2.14
USP53-202ENST00000450251 VWCEQ96DN2 955 aa1.7□□□□□ -2.14
USP53-202ENST00000450251 URB1-AS1Q96HZ7 61 aa1.7□□□□□ -2.14
USP53-202ENST00000450251 Q9H8V8 135 aa1.7□□□□□ -2.14
USP53-202ENST00000450251 SND1-IT1Q9HBX3 110 aa1.7□□□□□ -2.14
USP53-202ENST00000450251 COL4A5P29400 1685 aa1.7□□□□□ -2.14
USP53-202ENST00000450251 IGHV5-10-1A0A0J9YXX1 117 aa1.7□□□□□ -2.14
USP53-202ENST00000450251 TEX22C9J3V5 150 aa1.7□□□□□ -2.14
USP53-202ENST00000450251 TRGV3P03979 118 aa1.7□□□□□ -2.14
USP53-202ENST00000450251 IGHV1-8P0DP01 117 aa1.7□□□□□ -2.14
USP53-202ENST00000450251 ZNF80P51504 273 aaPredicted RBP1.7□□□□□ -2.14
USP53-202ENST00000450251 OXLD1Q5BKU9 147 aa1.7□□□□□ -2.14
USP53-202ENST00000450251 PIK3CD-AS1Q5SR53 167 aa1.7□□□□□ -2.14
USP53-202ENST00000450251 SUMO4Q6EEV6 95 aa1.7□□□□□ -2.14
USP53-202ENST00000450251 C16orf47Q6ZP98 133 aaPredicted RBP1.7□□□□□ -2.14
USP53-202ENST00000450251 COX8CQ7Z4L0 72 aa1.7□□□□□ -2.14
USP53-202ENST00000450251 C11orf53Q8IXP5 236 aa1.7□□□□□ -2.14
USP53-202ENST00000450251 ZNRF1Q8ND25 227 aa1.7□□□□□ -2.14
USP53-202ENST00000450251 C7orf69Q9H7B7 122 aa1.7□□□□□ -2.14
USP53-202ENST00000450251 C14orf132Q9NPU4 83 aa1.7□□□□□ -2.14
USP53-202ENST00000450251 HHLA3Q9XRX5 114 aa1.7□□□□□ -2.14
USP53-202ENST00000450251 MYO9AB2RTY4 2548 aa1.7□□□□□ -2.14
USP53-202ENST00000450251 ZFYVE26Q68DK2 2539 aa1.69□□□□□ -2.14
USP53-202ENST00000450251 ANAPC1Q9H1A4 1944 aa1.69□□□□□ -2.14
USP53-202ENST00000450251 IGHV1OR15-9A0A0B4J2B8 117 aa1.69□□□□□ -2.14
USP53-202ENST00000450251 TRBV6-5A0A0K0K1A5 114 aa1.69□□□□□ -2.14
USP53-202ENST00000450251 TRBV27A0A0K0K1C4 114 aa1.69□□□□□ -2.14
USP53-202ENST00000450251 A0A1W2PRX2 142 aa1.69□□□□□ -2.14
USP53-202ENST00000450251 INSP01308 110 aa1.69□□□□□ -2.14
USP53-202ENST00000450251 APELAP0DMC3 54 aa1.69□□□□□ -2.14
USP53-202ENST00000450251 IGHV3-30-3P0DP02 117 aa1.69□□□□□ -2.14
USP53-202ENST00000450251 NREPQ16612 68 aa1.69□□□□□ -2.14
USP53-202ENST00000450251 C4orf26Q17RF5 130 aa1.69□□□□□ -2.14
USP53-202ENST00000450251 ZNF625Q96I27 306 aaPredicted RBP1.69□□□□□ -2.14
USP53-202ENST00000450251 SCN10AQ9Y5Y9 1956 aa1.69□□□□□ -2.14
USP53-202ENST00000450251 HEATR5AQ86XA9 2040 aa1.69□□□□□ -2.14
USP53-202ENST00000450251 IGHV1OR15-1A0A075B7D0 117 aa1.69□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms