RNA–Protein interactions for RNA: ENST00000449190.5

RFX3-207, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-207ENST00000449190 C19orf71A6NCJ1 209 aa6.55□□□□□ -1.36
RFX3-207ENST00000449190 NUPR2A6NF83 97 aa6.55□□□□□ -1.36
RFX3-207ENST00000449190 M0R2P5 195 aa6.55□□□□□ -1.36
RFX3-207ENST00000449190 GATCO43716 136 aaKnown RBP6.55□□□□□ -1.36
RFX3-207ENST00000449190 GAGE7O76087 117 aa6.55□□□□□ -1.36
RFX3-207ENST00000449190 CXCL1P09341 107 aa6.55□□□□□ -1.36
RFX3-207ENST00000449190 GAGE12FP0CL80 117 aa6.55□□□□□ -1.36
RFX3-207ENST00000449190 GAGE12GP0CL81 117 aa6.55□□□□□ -1.36
RFX3-207ENST00000449190 GAGE12IP0CL82 117 aa6.55□□□□□ -1.36
RFX3-207ENST00000449190 NANOS2P60321 138 aaKnown RBP6.55□□□□□ -1.36
RFX3-207ENST00000449190 LGALS9BQ3B8N2 356 aa6.55□□□□□ -1.36
RFX3-207ENST00000449190 LINC01551Q86U37 167 aa6.55□□□□□ -1.36
RFX3-207ENST00000449190 C15orf54Q8N8G6 183 aa6.55□□□□□ -1.36
RFX3-207ENST00000449190 C11orf72Q8NBR9 251 aa6.55□□□□□ -1.36
RFX3-207ENST00000449190 SYT8Q8NBV8 401 aa6.55□□□□□ -1.36
RFX3-207ENST00000449190 NUDT10Q8NFP7 164 aa6.55□□□□□ -1.36
RFX3-207ENST00000449190 NUDT11Q96G61 164 aa6.55□□□□□ -1.36
RFX3-207ENST00000449190 KLK5Q9Y337 293 aaPredicted RBP6.55□□□□□ -1.36
RFX3-207ENST00000449190 PLAC8L1A1L4L8 177 aa6.54□□□□□ -1.36
RFX3-207ENST00000449190 TMEM218A2RU14 115 aa6.54□□□□□ -1.36
RFX3-207ENST00000449190 F8W036 122 aa6.54□□□□□ -1.36
RFX3-207ENST00000449190 K7EN84 100 aa6.54□□□□□ -1.36
RFX3-207ENST00000449190 SPINK4O60575 86 aa6.54□□□□□ -1.36
RFX3-207ENST00000449190 ARMS2P0C7Q2 107 aa6.54□□□□□ -1.36
RFX3-207ENST00000449190 C12orf74Q32Q52 190 aa6.54□□□□□ -1.36
RFX3-207ENST00000449190 DNLZQ5SXM8 178 aa6.54□□□□□ -1.36
RFX3-207ENST00000449190 FAM231DQ6ZW35 169 aa6.54□□□□□ -1.36
RFX3-207ENST00000449190 PHLDA1Q8WV24 401 aaPredicted RBP6.54□□□□□ -1.36
RFX3-207ENST00000449190 RNASE7Q9H1E1 156 aaKnown RBP6.54□□□□□ -1.36
RFX3-207ENST00000449190 RPP21Q9H633 154 aaKnown RBP6.54□□□□□ -1.36
RFX3-207ENST00000449190 OSTCQ9NRP0 149 aa6.54□□□□□ -1.36
RFX3-207ENST00000449190 IL36BQ9NZH7 164 aa6.54□□□□□ -1.36
RFX3-207ENST00000449190 CELA1Q9UNI1 258 aa6.54□□□□□ -1.36
RFX3-207ENST00000449190 PHLDA3Q9Y5J5 127 aa6.54□□□□□ -1.36
RFX3-207ENST00000449190 TRAV10A0A0B4J240 114 aa6.53□□□□□ -1.36
RFX3-207ENST00000449190 A0A1W2PPQ1 181 aa6.53□□□□□ -1.36
RFX3-207ENST00000449190 A8MWL6 223 aa6.53□□□□□ -1.36
RFX3-207ENST00000449190 H3BVH4 76 aa6.53□□□□□ -1.36
RFX3-207ENST00000449190 ATP5G1P05496 136 aa6.53□□□□□ -1.36
RFX3-207ENST00000449190 MED14OSP0DP75 135 aa6.53□□□□□ -1.36
RFX3-207ENST00000449190 HTN3P15516 51 aa6.53□□□□□ -1.36
RFX3-207ENST00000449190 RPL23P62829 140 aaKnown RBP6.53□□□□□ -1.36
RFX3-207ENST00000449190 RPL19P84098 196 aaKnown RBP6.53□□□□□ -1.36
RFX3-207ENST00000449190 PNRC1Q12796 327 aaPredicted RBP6.53□□□□□ -1.36
RFX3-207ENST00000449190 ZNF876PQ49A33 203 aa6.53□□□□□ -1.36
RFX3-207ENST00000449190 Q6ZTI0 123 aa6.53□□□□□ -1.36
RFX3-207ENST00000449190 PTH2Q96A98 100 aa6.53□□□□□ -1.36
RFX3-207ENST00000449190 TPPP3Q9BW30 176 aa6.53□□□□□ -1.36
RFX3-207ENST00000449190 MRPL16Q9NX20 251 aaKnown RBP6.53□□□□□ -1.36
RFX3-207ENST00000449190 DEFB131BA0A096LNP1 70 aa6.52□□□□□ -1.37
RFX3-207ENST00000449190 F2Z2F3 143 aa6.52□□□□□ -1.37
RFX3-207ENST00000449190 RNASE3P12724 160 aaKnown RBP6.52□□□□□ -1.37
RFX3-207ENST00000449190 SPANXN1Q5VSR9 72 aa6.52□□□□□ -1.37
RFX3-207ENST00000449190 Q6ZTC4 211 aa6.52□□□□□ -1.37
RFX3-207ENST00000449190 ZFP82Q8N141 532 aa6.52□□□□□ -1.37
RFX3-207ENST00000449190 FER1L6-AS1Q8NA97 138 aa6.52□□□□□ -1.37
RFX3-207ENST00000449190 OR10G8Q8NGN5 311 aa6.52□□□□□ -1.37
RFX3-207ENST00000449190 RASL10AQ92737 203 aa6.52□□□□□ -1.37
RFX3-207ENST00000449190 ISOC2Q96AB3 205 aa6.52□□□□□ -1.37
RFX3-207ENST00000449190 SFRP2Q96HF1 295 aa6.52□□□□□ -1.37
RFX3-207ENST00000449190 C9orf85Q96MD7 179 aa6.52□□□□□ -1.37
RFX3-207ENST00000449190 NDUFAF3Q9BU61 184 aa6.52□□□□□ -1.37
RFX3-207ENST00000449190 F5H768 121 aa6.51□□□□□ -1.37
RFX3-207ENST00000449190 PPP1R2P9O14990 202 aa6.51□□□□□ -1.37
RFX3-207ENST00000449190 MT-ND4LP03901 98 aa6.51□□□□□ -1.37
RFX3-207ENST00000449190 GZMBP10144 247 aa6.51□□□□□ -1.37
RFX3-207ENST00000449190 TCTAP57738 103 aa6.51□□□□□ -1.37
RFX3-207ENST00000449190 NDUFA5Q16718 116 aa6.51□□□□□ -1.37
RFX3-207ENST00000449190 CT83Q5H943 113 aa6.51□□□□□ -1.37
RFX3-207ENST00000449190 PIK3CD-AS1Q5SR53 167 aa6.51□□□□□ -1.37
RFX3-207ENST00000449190 OR4C5Q8NGB2 326 aa6.51□□□□□ -1.37
RFX3-207ENST00000449190 BORCS7Q96B45 105 aa6.51□□□□□ -1.37
RFX3-207ENST00000449190 SEC11CQ9BY50 192 aa6.51□□□□□ -1.37
RFX3-207ENST00000449190 DNAH7Q8WXX0 4024 aa6.5□□□□□ -1.37
RFX3-207ENST00000449190 TRAV4A0A0B4J268 109 aa6.5□□□□□ -1.37
RFX3-207ENST00000449190 TRGV4A0A0C4DH28 118 aa6.5□□□□□ -1.37
RFX3-207ENST00000449190 A8MWV9 139 aa6.5□□□□□ -1.37
RFX3-207ENST00000449190 M0R381 172 aa6.5□□□□□ -1.37
RFX3-207ENST00000449190 CIDEAO60543 219 aa6.5□□□□□ -1.37
RFX3-207ENST00000449190 OR5AL1P0C617 328 aa6.5□□□□□ -1.37
RFX3-207ENST00000449190 SSTP61278 116 aa6.5□□□□□ -1.37
RFX3-207ENST00000449190 CACNG7P62955 275 aa6.5□□□□□ -1.37
RFX3-207ENST00000449190 SLAQ13239 276 aa6.5□□□□□ -1.37
RFX3-207ENST00000449190 LINC00612Q8N6U2 182 aa6.5□□□□□ -1.37
RFX3-207ENST00000449190 C18orf15Q96N68 181 aa6.5□□□□□ -1.37
RFX3-207ENST00000449190 SCRT2Q9NQ03 307 aa6.5□□□□□ -1.37
RFX3-207ENST00000449190 SNAI2O43623 268 aa6.49□□□□□ -1.37
RFX3-207ENST00000449190 IGHV3-53P01767 116 aa6.49□□□□□ -1.37
RFX3-207ENST00000449190 SMIM17P0DL12 118 aa6.49□□□□□ -1.37
RFX3-207ENST00000449190 WDR73Q6P4I2 378 aa6.49□□□□□ -1.37
RFX3-207ENST00000449190 LYZL1Q6UWQ5 148 aa6.49□□□□□ -1.37
RFX3-207ENST00000449190 SMIM15Q7Z3B0 74 aa6.49□□□□□ -1.37
RFX3-207ENST00000449190 ZNF575Q86XF7 245 aa6.49□□□□□ -1.37
RFX3-207ENST00000449190 TSKUQ8WUA8 353 aa6.49□□□□□ -1.37
RFX3-207ENST00000449190 FAM210BQ96KR6 192 aa6.49□□□□□ -1.37
RFX3-207ENST00000449190 SSBP4Q9BWG4 385 aaPredicted RBP6.49□□□□□ -1.37
RFX3-207ENST00000449190 GFRA4Q9GZZ7 299 aa6.49□□□□□ -1.37
RFX3-207ENST00000449190 TENM2Q9NT68 2774 aa6.49□□□□□ -1.37
RFX3-207ENST00000449190 MUC21A0A0G2JKD1 596 aa6.48□□□□□ -1.37
RFX3-207ENST00000449190 MUC21A0A140T8X8 626 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 121 ms