RNA–Protein interactions for RNA: ENST00000438213.5

CTSD-205, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-205ENST00000438213 SMIM12Q96EX1 92 aa11.41□□□□□ -0.58
CTSD-205ENST00000438213 TMSB15BA0A087X1C1 80 aa11.4□□□□□ -0.58
CTSD-205ENST00000438213 RAB19A4D1S5 217 aa11.4□□□□□ -0.58
CTSD-205ENST00000438213 GRIFINA4D1Z8 144 aa11.4□□□□□ -0.58
CTSD-205ENST00000438213 PGPEP1LA6NFU8 196 aa11.4□□□□□ -0.58
CTSD-205ENST00000438213 ARMS2P0C7Q2 107 aa11.4□□□□□ -0.58
CTSD-205ENST00000438213 CENPWQ5EE01 88 aa11.4□□□□□ -0.58
CTSD-205ENST00000438213 ZNF506Q5JVG8 444 aa11.4□□□□□ -0.58
CTSD-205ENST00000438213 PRR27Q6MZM9 219 aa11.4□□□□□ -0.58
CTSD-205ENST00000438213 DAZAP1Q96EP5 407 aaKnown RBP11.4□□□□□ -0.58
CTSD-205ENST00000438213 BIN3Q9NQY0 253 aa11.4□□□□□ -0.58
CTSD-205ENST00000438213 ICOSQ9Y6W8 199 aa11.4□□□□□ -0.58
CTSD-205ENST00000438213 NACAE9PAV3 2078 aa11.4□□□□□ -0.58
CTSD-205ENST00000438213 RYR3Q15413 4870 aa11.4□□□□□ -0.58
CTSD-205ENST00000438213 H3BVH4 76 aa11.39□□□□□ -0.59
CTSD-205ENST00000438213 RS1O15537 224 aa11.39□□□□□ -0.59
CTSD-205ENST00000438213 MGST1P10620 155 aaKnown RBP11.39□□□□□ -0.59
CTSD-205ENST00000438213 MRPL23Q16540 153 aaKnown RBP11.39□□□□□ -0.59
CTSD-205ENST00000438213 CFAP126Q5VTH2 177 aa11.39□□□□□ -0.59
CTSD-205ENST00000438213 SYT8Q8NBV8 401 aa11.39□□□□□ -0.59
CTSD-205ENST00000438213 PHLDA3Q9Y5J5 127 aa11.39□□□□□ -0.59
CTSD-205ENST00000438213 DNAH1Q9P2D7 4330 aa11.39□□□□□ -0.59
CTSD-205ENST00000438213 A0A096LPF7 62 aa11.38□□□□□ -0.59
CTSD-205ENST00000438213 A8MWV9 139 aa11.38□□□□□ -0.59
CTSD-205ENST00000438213 PCNPQ8WW12 178 aaKnown RBP11.38□□□□□ -0.59
CTSD-205ENST00000438213 EIF5A2Q9GZV4 153 aaKnown RBP11.38□□□□□ -0.59
CTSD-205ENST00000438213 TMEM250H0YL14 139 aa11.37□□□□□ -0.59
CTSD-205ENST00000438213 CXCL1P09341 107 aa11.37□□□□□ -0.59
CTSD-205ENST00000438213 TEX261Q6UWH6 196 aa11.37□□□□□ -0.59
CTSD-205ENST00000438213 LINC00588Q9Y4M8 146 aa11.37□□□□□ -0.59
CTSD-205ENST00000438213 RYR2Q92736 4967 aa11.37□□□□□ -0.59
CTSD-205ENST00000438213 IGLV2-8P01709 118 aa11.36□□□□□ -0.59
CTSD-205ENST00000438213 MED14OSP0DP75 135 aa11.36□□□□□ -0.59
CTSD-205ENST00000438213 GATA1P15976 413 aaPredicted RBP11.36□□□□□ -0.59
CTSD-205ENST00000438213 ESRGQ1W209 222 aa11.36□□□□□ -0.59
CTSD-205ENST00000438213 ZNF575Q86XF7 245 aa11.36□□□□□ -0.59
CTSD-205ENST00000438213 SCRT2Q9NQ03 307 aa11.36□□□□□ -0.59
CTSD-205ENST00000438213 NDUFS6O75380 124 aaKnown RBP11.35□□□□□ -0.59
CTSD-205ENST00000438213 GYPEP15421 78 aa11.35□□□□□ -0.59
CTSD-205ENST00000438213 RPL19P84098 196 aaKnown RBP11.35□□□□□ -0.59
CTSD-205ENST00000438213 DMRTA1Q5VZB9 504 aa11.35□□□□□ -0.59
CTSD-205ENST00000438213 ZFP2Q6ZN57 461 aa11.35□□□□□ -0.59
CTSD-205ENST00000438213 NEGR1Q7Z3B1 354 aa11.35□□□□□ -0.59
CTSD-205ENST00000438213 ZFP82Q8N141 532 aa11.35□□□□□ -0.59
CTSD-205ENST00000438213 PRADC1Q9BSG0 188 aa11.35□□□□□ -0.59
CTSD-205ENST00000438213 IGHV3-73A0A0B4J1V6 119 aa11.34□□□□□ -0.59
CTSD-205ENST00000438213 TRBV6-4A0A1B0GX49 114 aa11.34□□□□□ -0.59
CTSD-205ENST00000438213 SRIP30626 198 aa11.34□□□□□ -0.59
CTSD-205ENST00000438213 RPS20P60866 119 aaKnown RBP11.34□□□□□ -0.59
CTSD-205ENST00000438213 TOR2AQ5JU69 321 aa11.34□□□□□ -0.59
CTSD-205ENST00000438213 SH2D6Q7Z4S9 175 aa11.34□□□□□ -0.59
CTSD-205ENST00000438213 FAM210AQ96ND0 272 aa11.34□□□□□ -0.59
CTSD-205ENST00000438213 TRBV20OR9-2A0A075B6H5 130 aa11.33□□□□□ -0.6
CTSD-205ENST00000438213 IGLV2-18A0A075B6J9 118 aa11.33□□□□□ -0.6
CTSD-205ENST00000438213 XKRY2A2RUG3 117 aa11.33□□□□□ -0.6
CTSD-205ENST00000438213 K7EQD1 137 aa11.33□□□□□ -0.6
CTSD-205ENST00000438213 M0R2N4 97 aa11.33□□□□□ -0.6
CTSD-205ENST00000438213 M0R381 172 aa11.33□□□□□ -0.6
CTSD-205ENST00000438213 P01737 135 aa11.33□□□□□ -0.6
CTSD-205ENST00000438213 ZNRF2Q8NHG8 242 aa11.33□□□□□ -0.6
CTSD-205ENST00000438213 PARLQ9H300 379 aa11.33□□□□□ -0.6
CTSD-205ENST00000438213 C19orf71A6NCJ1 209 aa11.32□□□□□ -0.6
CTSD-205ENST00000438213 RHODO00212 210 aa11.32□□□□□ -0.6
CTSD-205ENST00000438213 CEBPGP53567 150 aa11.32□□□□□ -0.6
CTSD-205ENST00000438213 RHOHQ15669 191 aa11.32□□□□□ -0.6
CTSD-205ENST00000438213 SLC25A29Q8N8R3 303 aa11.32□□□□□ -0.6
CTSD-205ENST00000438213 OR2D3Q8NGH3 330 aa11.32□□□□□ -0.6
CTSD-205ENST00000438213 OCC1Q8TAD7 63 aa11.32□□□□□ -0.6
CTSD-205ENST00000438213 SFRP2Q96HF1 295 aa11.32□□□□□ -0.6
CTSD-205ENST00000438213 UPK3BQ9BT76 320 aa11.32□□□□□ -0.6
CTSD-205ENST00000438213 SSBP4Q9BWG4 385 aaPredicted RBP11.32□□□□□ -0.6
CTSD-205ENST00000438213 Q9H8V8 135 aa11.32□□□□□ -0.6
CTSD-205ENST00000438213 MRPS16Q9Y3D3 137 aaKnown RBP11.32□□□□□ -0.6
CTSD-205ENST00000438213 VPS13DQ5THJ4 4388 aa11.31□□□□□ -0.6
CTSD-205ENST00000438213 OR5AL1P0C617 328 aa11.31□□□□□ -0.6
CTSD-205ENST00000438213 LYPD5Q6UWN5 251 aa11.31□□□□□ -0.6
CTSD-205ENST00000438213 JPT2Q9H910 190 aa11.31□□□□□ -0.6
CTSD-205ENST00000438213 KMT2AQ03164 3969 aa11.31□□□□□ -0.6
CTSD-205ENST00000438213 SNAI2O43623 268 aa11.3□□□□□ -0.6
CTSD-205ENST00000438213 SPANXN1Q5VSR9 72 aa11.3□□□□□ -0.6
CTSD-205ENST00000438213 Q6ZR54 194 aa11.3□□□□□ -0.6
CTSD-205ENST00000438213 NUDT10Q8NFP7 164 aa11.3□□□□□ -0.6
CTSD-205ENST00000438213 NUDT11Q96G61 164 aa11.3□□□□□ -0.6
CTSD-205ENST00000438213 OR10AG1Q8NH19 301 aa11.29□□□□□ -0.6
CTSD-205ENST00000438213 SAMD10Q9BYL1 202 aa11.29□□□□□ -0.6
CTSD-205ENST00000438213 LY96Q9Y6Y9 160 aa11.29□□□□□ -0.6
CTSD-205ENST00000438213 HYDINQ4G0P3 5121 aa11.29□□□□□ -0.6
CTSD-205ENST00000438213 LOC100131303A0A0U1RQF7 123 aa11.28□□□□□ -0.6
CTSD-205ENST00000438213 NBDYA0A0U1RRE5 68 aa11.28□□□□□ -0.6
CTSD-205ENST00000438213 F2Z2F3 143 aa11.28□□□□□ -0.6
CTSD-205ENST00000438213 SRP19P09132 144 aaKnown RBP11.28□□□□□ -0.6
CTSD-205ENST00000438213 PEA15Q15121 130 aa11.28□□□□□ -0.6
CTSD-205ENST00000438213 FAM74A4Q5TZK3 123 aa11.28□□□□□ -0.6
CTSD-205ENST00000438213 UFSP1Q6NVU6 142 aa11.28□□□□□ -0.6
CTSD-205ENST00000438213 FER1L6-AS1Q8NA97 138 aa11.28□□□□□ -0.6
CTSD-205ENST00000438213 SMIM7Q9BQ49 75 aa11.28□□□□□ -0.6
CTSD-205ENST00000438213 A0A087WWL8 130 aa11.27□□□□□ -0.61
CTSD-205ENST00000438213 A0A1W2PPQ1 181 aa11.27□□□□□ -0.61
CTSD-205ENST00000438213 ZNF727A8MUV8 499 aa11.27□□□□□ -0.61
CTSD-205ENST00000438213 NXPH4O95158 308 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms