RNA–Protein interactions for RNA: ENST00000429440.5

CDC42BPA-206, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 2

Gene CDC42BPA, Length 2,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-206ENST00000429440 SAA1P0DJI8 122 aaPredicted RBP6.78□□□□□ -1.32
CDC42BPA-206ENST00000429440 CD59P13987 128 aa6.78□□□□□ -1.32
CDC42BPA-206ENST00000429440 PVRIGQ6DKI7 326 aa6.78□□□□□ -1.32
CDC42BPA-206ENST00000429440 Q6ZT83 130 aa6.78□□□□□ -1.32
CDC42BPA-206ENST00000429440 LINC00311Q8N616 119 aa6.78□□□□□ -1.32
CDC42BPA-206ENST00000429440 AMELXQ99217 191 aa6.78□□□□□ -1.32
CDC42BPA-206ENST00000429440 SCNM1Q9BWG6 230 aa6.78□□□□□ -1.32
CDC42BPA-206ENST00000429440 DMXL1Q9Y485 3027 aa6.77□□□□□ -1.33
CDC42BPA-206ENST00000429440 FAM236DA0A1B0GTK5 79 aa6.77□□□□□ -1.33
CDC42BPA-206ENST00000429440 MRPL33O75394 65 aaKnown RBP6.77□□□□□ -1.33
CDC42BPA-206ENST00000429440 FAM236CP0DP71 79 aa6.77□□□□□ -1.33
CDC42BPA-206ENST00000429440 NPC2P61916 151 aa6.77□□□□□ -1.33
CDC42BPA-206ENST00000429440 WT1-ASQ06250 92 aa6.77□□□□□ -1.33
CDC42BPA-206ENST00000429440 ZNF575Q86XF7 245 aa6.77□□□□□ -1.33
CDC42BPA-206ENST00000429440 PSMG3-AS1Q96PY0 264 aa6.77□□□□□ -1.33
CDC42BPA-206ENST00000429440 PLA2G2CQ5R387 149 aa6.77□□□□□ -1.33
CDC42BPA-206ENST00000429440 FAM216BQ8N7L0 139 aa6.77□□□□□ -1.33
CDC42BPA-206ENST00000429440 C10orf105Q8TEF2 133 aa6.77□□□□□ -1.33
CDC42BPA-206ENST00000429440 SMIM2Q9BVW6 85 aa6.77□□□□□ -1.33
CDC42BPA-206ENST00000429440 MAGEA5P43359 124 aa6.76□□□□□ -1.33
CDC42BPA-206ENST00000429440 C20orf173Q96LM9 149 aa6.76□□□□□ -1.33
CDC42BPA-206ENST00000429440 TTTY12Q9BZ98 90 aa6.76□□□□□ -1.33
CDC42BPA-206ENST00000429440 TPSG1Q9NRR2 321 aa6.76□□□□□ -1.33
CDC42BPA-206ENST00000429440 ICOSQ9Y6W8 199 aa6.76□□□□□ -1.33
CDC42BPA-206ENST00000429440 LAMA5O15230 3695 aa6.76□□□□□ -1.33
CDC42BPA-206ENST00000429440 C11orf86A6NJI1 115 aa6.76□□□□□ -1.33
CDC42BPA-206ENST00000429440 IGHV3-48P01763 117 aa6.76□□□□□ -1.33
CDC42BPA-206ENST00000429440 IGKV1-16P04430 117 aa6.76□□□□□ -1.33
CDC42BPA-206ENST00000429440 TMEM200BQ69YZ2 307 aa6.76□□□□□ -1.33
CDC42BPA-206ENST00000429440 DAND5Q8N907 189 aa6.76□□□□□ -1.33
CDC42BPA-206ENST00000429440 BEX4Q9NWD9 120 aaPredicted RBP6.76□□□□□ -1.33
CDC42BPA-206ENST00000429440 SERP1Q9Y6X1 66 aa6.76□□□□□ -1.33
CDC42BPA-206ENST00000429440 URB1O60287 2271 aaKnown RBP6.75□□□□□ -1.33
CDC42BPA-206ENST00000429440 IQCF6A8MYZ5 107 aa6.75□□□□□ -1.33
CDC42BPA-206ENST00000429440 CGB3P0DN86 165 aa6.75□□□□□ -1.33
CDC42BPA-206ENST00000429440 CGB7P0DN87 165 aa6.75□□□□□ -1.33
CDC42BPA-206ENST00000429440 PDE6HQ13956 83 aa6.75□□□□□ -1.33
CDC42BPA-206ENST00000429440 C6orf226Q5I0X4 101 aa6.75□□□□□ -1.33
CDC42BPA-206ENST00000429440 MUSTN1Q8IVN3 82 aa6.75□□□□□ -1.33
CDC42BPA-206ENST00000429440 TP53TG1Q9Y2A0 90 aa6.75□□□□□ -1.33
CDC42BPA-206ENST00000429440 NBR2O15453 112 aa6.75□□□□□ -1.33
CDC42BPA-206ENST00000429440 C14orf178Q8N769 122 aaPredicted RBP6.75□□□□□ -1.33
CDC42BPA-206ENST00000429440 TMEM167AQ8TBQ9 72 aa6.75□□□□□ -1.33
CDC42BPA-206ENST00000429440 TIMM21Q9BVV7 248 aa6.75□□□□□ -1.33
CDC42BPA-206ENST00000429440 BOD1L1Q8NFC6 3051 aa6.75□□□□□ -1.33
CDC42BPA-206ENST00000429440 TTC28Q96AY4 2481 aa6.75□□□□□ -1.33
CDC42BPA-206ENST00000429440 CACNA1HO95180 2353 aa6.74□□□□□ -1.33
CDC42BPA-206ENST00000429440 DSCAML1Q8TD84 2053 aa6.74□□□□□ -1.33
CDC42BPA-206ENST00000429440 SVILO95425 2214 aa6.74□□□□□ -1.33
CDC42BPA-206ENST00000429440 IGLV4-69A0A075B6H9 119 aa6.74□□□□□ -1.33
CDC42BPA-206ENST00000429440 E7EUB6 86 aa6.74□□□□□ -1.33
CDC42BPA-206ENST00000429440 TSPEAR-AS2P59090 65 aa6.74□□□□□ -1.33
CDC42BPA-206ENST00000429440 RHOHQ15669 191 aa6.74□□□□□ -1.33
CDC42BPA-206ENST00000429440 FAM201AQ5SY85 155 aa6.74□□□□□ -1.33
CDC42BPA-206ENST00000429440 ZNF826PQ6ZT77 177 aa6.74□□□□□ -1.33
CDC42BPA-206ENST00000429440 CD177Q8N6Q3 437 aa6.74□□□□□ -1.33
CDC42BPA-206ENST00000429440 MDS2Q8NDY4 140 aa6.74□□□□□ -1.33
CDC42BPA-206ENST00000429440 EEF1AKMT3Q96AZ1 226 aa6.74□□□□□ -1.33
CDC42BPA-206ENST00000429440 A0A0J9YX75 114 aa6.74□□□□□ -1.33
CDC42BPA-206ENST00000429440 CGB1A6NKQ9 187 aa6.74□□□□□ -1.33
CDC42BPA-206ENST00000429440 SYNJ2BPP57105 145 aa6.74□□□□□ -1.33
CDC42BPA-206ENST00000429440 LGALS3P17931 250 aaKnown RBP6.73□□□□□ -1.33
CDC42BPA-206ENST00000429440 C2orf66Q6UXQ4 117 aa6.73□□□□□ -1.33
CDC42BPA-206ENST00000429440 CXXC4Q9H2H0 198 aa6.73□□□□□ -1.33
CDC42BPA-206ENST00000429440 C16orf95Q9H693 158 aa6.73□□□□□ -1.33
CDC42BPA-206ENST00000429440 NBEAQ8NFP9 2946 aa6.73□□□□□ -1.33
CDC42BPA-206ENST00000429440 NAV3Q8IVL0 2385 aa6.73□□□□□ -1.33
CDC42BPA-206ENST00000429440 IGHV3-64DA0A0J9YX35 117 aa6.73□□□□□ -1.33
CDC42BPA-206ENST00000429440 TMEM178BH3BS89 294 aa6.73□□□□□ -1.33
CDC42BPA-206ENST00000429440 M0R3E3 92 aa6.73□□□□□ -1.33
CDC42BPA-206ENST00000429440 TFF1P04155 84 aa6.73□□□□□ -1.33
CDC42BPA-206ENST00000429440 WT1P19544 449 aaPredicted RBP6.73□□□□□ -1.33
CDC42BPA-206ENST00000429440 UBE2E1P51965 193 aa6.73□□□□□ -1.33
CDC42BPA-206ENST00000429440 LYZP61626 148 aa6.73□□□□□ -1.33
CDC42BPA-206ENST00000429440 FAM27E3Q08E93 113 aa6.73□□□□□ -1.33
CDC42BPA-206ENST00000429440 ATP1A1-AS1Q5TC04 95 aa6.73□□□□□ -1.33
CDC42BPA-206ENST00000429440 C17orf77Q96MU5 243 aa6.73□□□□□ -1.33
CDC42BPA-206ENST00000429440 DKK4Q9UBT3 224 aa6.73□□□□□ -1.33
CDC42BPA-206ENST00000429440 SMIM26A0A096LP01 95 aa6.72□□□□□ -1.33
CDC42BPA-206ENST00000429440 IGHV1-69DA0A0B4J2H0 117 aa6.72□□□□□ -1.33
CDC42BPA-206ENST00000429440 SDHAF1A6NFY7 115 aa6.72□□□□□ -1.33
CDC42BPA-206ENST00000429440 SIRPDQ9H106 197 aa6.72□□□□□ -1.33
CDC42BPA-206ENST00000429440 PRR14LQ5THK1 2151 aa6.72□□□□□ -1.33
CDC42BPA-206ENST00000429440 IGHV4-4A0A075B6R2 117 aa6.72□□□□□ -1.33
CDC42BPA-206ENST00000429440 H3BRN7 92 aa6.72□□□□□ -1.33
CDC42BPA-206ENST00000429440 ZNF80P51504 273 aaPredicted RBP6.72□□□□□ -1.33
CDC42BPA-206ENST00000429440 DLX1P56177 255 aa6.72□□□□□ -1.33
CDC42BPA-206ENST00000429440 C17orf58Q2M2W7 97 aa6.72□□□□□ -1.33
CDC42BPA-206ENST00000429440 NSUN5P1Q3KNT7 163 aa6.72□□□□□ -1.33
CDC42BPA-206ENST00000429440 TMEM30BQ3MIR4 351 aa6.72□□□□□ -1.33
CDC42BPA-206ENST00000429440 RUSC1-AS1Q66K80 236 aa6.72□□□□□ -1.33
CDC42BPA-206ENST00000429440 KLK15Q9H2R5 256 aa6.72□□□□□ -1.33
CDC42BPA-206ENST00000429440 BUB3O43684 328 aa6.71□□□□□ -1.34
CDC42BPA-206ENST00000429440 ZNF491Q8N8L2 437 aa6.71□□□□□ -1.34
CDC42BPA-206ENST00000429440 LEAP2Q969E1 77 aa6.71□□□□□ -1.34
CDC42BPA-206ENST00000429440 SPRR3Q9UBC9 169 aa6.71□□□□□ -1.34
CDC42BPA-206ENST00000429440 OTOGLQ3ZCN5 2332 aa6.71□□□□□ -1.34
CDC42BPA-206ENST00000429440 SPRY2O43597 315 aa6.71□□□□□ -1.34
CDC42BPA-206ENST00000429440 SUMO2P61956 95 aaKnown RBP6.71□□□□□ -1.34
CDC42BPA-206ENST00000429440 CXorf67Q86X51 503 aaPredicted RBP6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms