RNA–Protein interactions for RNA: ENST00000427110.6

PTPRC-208, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-208ENST00000427110 MAP1LC3BQ9GZQ8 125 aa1.08□□□□□ -2.24
PTPRC-208ENST00000427110 NPVFQ9HCQ7 196 aa1.08□□□□□ -2.24
PTPRC-208ENST00000427110 TMEM14BQ9NUH8 114 aa1.08□□□□□ -2.24
PTPRC-208ENST00000427110 SLC39A9Q9NUM3 307 aa1.08□□□□□ -2.24
PTPRC-208ENST00000427110 BET1LQ9NYM9 111 aa1.08□□□□□ -2.24
PTPRC-208ENST00000427110 DOK5Q9P104 306 aa1.08□□□□□ -2.24
PTPRC-208ENST00000427110 KAAG1Q9UBP8 84 aa1.08□□□□□ -2.24
PTPRC-208ENST00000427110 VPREB3Q9UKI3 123 aa1.08□□□□□ -2.24
PTPRC-208ENST00000427110 RBM7Q9Y580 266 aaKnown RBP1.08□□□□□ -2.24
PTPRC-208ENST00000427110 FAM215AQ9Y5M1 114 aa1.08□□□□□ -2.24
PTPRC-208ENST00000427110 PUS1Q9Y606 427 aaKnown RBP eCLIP1.08□□□□□ -2.24
PTPRC-208ENST00000427110 LY96Q9Y6Y9 160 aa1.08□□□□□ -2.24
PTPRC-208ENST00000427110 ARL2-SNX15V9GYD0 113 aa1.08□□□□□ -2.24
PTPRC-208ENST00000427110 SPENQ96T58 3664 aaKnown RBP1.08□□□□□ -2.24
PTPRC-208ENST00000427110 EP300Q09472 2414 aaPredicted RBP1.07□□□□□ -2.24
PTPRC-208ENST00000427110 TTC28Q96AY4 2481 aa1.07□□□□□ -2.24
PTPRC-208ENST00000427110 DMXL1Q9Y485 3027 aa1.07□□□□□ -2.24
PTPRC-208ENST00000427110 IGHV3OR15-7A0A075B7D8 119 aa1.07□□□□□ -2.24
PTPRC-208ENST00000427110 TRGV10A0A0A0MS01 117 aa1.07□□□□□ -2.24
PTPRC-208ENST00000427110 TGIF2-C20orf24A0A0A6YYL0 155 aa1.07□□□□□ -2.24
PTPRC-208ENST00000427110 UBE2L5PA0A1B0GUS4 154 aa1.07□□□□□ -2.24
PTPRC-208ENST00000427110 SPAARA0A1B0GVQ0 90 aa1.07□□□□□ -2.24
PTPRC-208ENST00000427110 A0A1W2PRE2 83 aa1.07□□□□□ -2.24
PTPRC-208ENST00000427110 hADV38S2A0JD32 116 aa1.07□□□□□ -2.24
PTPRC-208ENST00000427110 CEBPZOSA8MTT3 80 aa1.07□□□□□ -2.24
PTPRC-208ENST00000427110 ZNF727A8MUV8 499 aa1.07□□□□□ -2.24
PTPRC-208ENST00000427110 C9JCJ5 164 aa1.07□□□□□ -2.24
PTPRC-208ENST00000427110 C8orf87E5RJ46 101 aa1.07□□□□□ -2.24
PTPRC-208ENST00000427110 F6UZH7 168 aa1.07□□□□□ -2.24
PTPRC-208ENST00000427110 LECT2O14960 151 aa1.07□□□□□ -2.24
PTPRC-208ENST00000427110 PDE6DO43924 150 aa1.07□□□□□ -2.24
PTPRC-208ENST00000427110 HIST1H2BKO60814 126 aa1.07□□□□□ -2.24
PTPRC-208ENST00000427110 MT-CO2P00403 227 aa1.07□□□□□ -2.24
PTPRC-208ENST00000427110 IFNA10P01566 189 aa1.07□□□□□ -2.24
PTPRC-208ENST00000427110 RBP4P02753 201 aa1.07□□□□□ -2.24
PTPRC-208ENST00000427110 TRGC2P03986 189 aa1.07□□□□□ -2.24
PTPRC-208ENST00000427110 HIST1H2BJP06899 126 aa1.07□□□□□ -2.24
PTPRC-208ENST00000427110 FBP1P09467 338 aa1.07□□□□□ -2.24
PTPRC-208ENST00000427110 OR4A8P0C604 315 aa1.07□□□□□ -2.24
PTPRC-208ENST00000427110 OR10J4P0C629 311 aa1.07□□□□□ -2.24
PTPRC-208ENST00000427110 TRGC1P0CF51 173 aa1.07□□□□□ -2.24
PTPRC-208ENST00000427110 ESDP10768 282 aa1.07□□□□□ -2.24
PTPRC-208ENST00000427110 IAPPP10997 89 aa1.07□□□□□ -2.24
PTPRC-208ENST00000427110 HIST1H1BP16401 226 aaKnown RBP1.07□□□□□ -2.24
PTPRC-208ENST00000427110 FGF7P21781 194 aa1.07□□□□□ -2.24
PTPRC-208ENST00000427110 HIST1H2BOP23527 126 aa1.07□□□□□ -2.24
PTPRC-208ENST00000427110 NPPCP23582 126 aa1.07□□□□□ -2.24
PTPRC-208ENST00000427110 HIST1H2BBP33778 126 aa1.07□□□□□ -2.24
PTPRC-208ENST00000427110 SRP14P37108 136 aaKnown RBP1.07□□□□□ -2.24
PTPRC-208ENST00000427110 AKR1C3P42330 323 aa1.07□□□□□ -2.24
PTPRC-208ENST00000427110 RPL35P42766 123 aaKnown RBP1.07□□□□□ -2.24
PTPRC-208ENST00000427110 AKR1D1P51857 326 aa1.07□□□□□ -2.24
PTPRC-208ENST00000427110 HIST1H2BDP58876 126 aa1.07□□□□□ -2.24
PTPRC-208ENST00000427110 YPEL3P61236 119 aaPredicted RBP1.07□□□□□ -2.24
PTPRC-208ENST00000427110 RHOBP62745 196 aa1.07□□□□□ -2.24
PTPRC-208ENST00000427110 HIST1H2BCP62807 126 aa1.07□□□□□ -2.24
PTPRC-208ENST00000427110 PRCDQ00LT1 54 aa1.07□□□□□ -2.24
PTPRC-208ENST00000427110 TFF3Q07654 80 aa1.07□□□□□ -2.24
PTPRC-208ENST00000427110 SRSF6Q13247 344 aaKnown RBP1.07□□□□□ -2.24
PTPRC-208ENST00000427110 JOSD1Q15040 202 aaPredicted RBP1.07□□□□□ -2.24
PTPRC-208ENST00000427110 HIST2H2BEQ16778 126 aa1.07□□□□□ -2.24
PTPRC-208ENST00000427110 RTL8BQ17RB0 113 aa1.07□□□□□ -2.24
PTPRC-208ENST00000427110 DEFB109BQ30KR1 87 aa1.07□□□□□ -2.24
PTPRC-208ENST00000427110 SPRNQ5BIV9 151 aa1.07□□□□□ -2.24
PTPRC-208ENST00000427110 CENPWQ5EE01 88 aa1.07□□□□□ -2.24
PTPRC-208ENST00000427110 PYY3Q5JQD4 70 aa1.07□□□□□ -2.24
PTPRC-208ENST00000427110 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.07□□□□□ -2.24
PTPRC-208ENST00000427110 EBLN2Q6P2I7 272 aa1.07□□□□□ -2.24
PTPRC-208ENST00000427110 LCN15Q6UWW0 184 aa1.07□□□□□ -2.24
PTPRC-208ENST00000427110 ZNF833PQ6ZTB9 187 aa1.07□□□□□ -2.24
PTPRC-208ENST00000427110 TCF24Q7RTU0 167 aa1.07□□□□□ -2.24
PTPRC-208ENST00000427110 DOLPP1Q86YN1 238 aa1.07□□□□□ -2.24
PTPRC-208ENST00000427110 HIST3H2BBQ8N257 126 aa1.07□□□□□ -2.24
PTPRC-208ENST00000427110 CNEP1R1Q8N9A8 125 aa1.07□□□□□ -2.24
PTPRC-208ENST00000427110 OR4P4Q8NGL7 312 aa1.07□□□□□ -2.24
PTPRC-208ENST00000427110 OR1L8Q8NGR8 309 aa1.07□□□□□ -2.24
PTPRC-208ENST00000427110 OR4X1Q8NH49 305 aa1.07□□□□□ -2.24
PTPRC-208ENST00000427110 TMEM167AQ8TBQ9 72 aa1.07□□□□□ -2.24
PTPRC-208ENST00000427110 HIST1H2BHQ93079 126 aa1.07□□□□□ -2.24
PTPRC-208ENST00000427110 ACY3Q96HD9 319 aa1.07□□□□□ -2.24
PTPRC-208ENST00000427110 PACRGQ96M98 296 aaPredicted RBP1.07□□□□□ -2.24
PTPRC-208ENST00000427110 MGST2Q99735 147 aa1.07□□□□□ -2.24
PTPRC-208ENST00000427110 HIST1H2BNQ99877 126 aa1.07□□□□□ -2.24
PTPRC-208ENST00000427110 HIST1H2BMQ99879 126 aa1.07□□□□□ -2.24
PTPRC-208ENST00000427110 B9D2Q9BPU9 175 aa1.07□□□□□ -2.24
PTPRC-208ENST00000427110 SMIM7Q9BQ49 75 aa1.07□□□□□ -2.24
PTPRC-208ENST00000427110 MRPL32Q9BYC8 188 aaKnown RBP1.07□□□□□ -2.24
PTPRC-208ENST00000427110 OR51B6Q9H340 312 aa1.07□□□□□ -2.24
PTPRC-208ENST00000427110 TMEM167BQ9NRX6 74 aa1.07□□□□□ -2.24
PTPRC-208ENST00000427110 FKBP11Q9NYL4 201 aa1.07□□□□□ -2.24
PTPRC-208ENST00000427110 IDI2-AS1Q9NZ38 188 aa1.07□□□□□ -2.24
PTPRC-208ENST00000427110 GNG13Q9P2W3 67 aa1.07□□□□□ -2.24
PTPRC-208ENST00000427110 PRNDQ9UKY0 176 aa1.07□□□□□ -2.24
PTPRC-208ENST00000427110 LINC00588Q9Y4M8 146 aa1.07□□□□□ -2.24
PTPRC-208ENST00000427110 LINC00312Q9Y6C7 94 aa1.07□□□□□ -2.24
PTPRC-208ENST00000427110 PXMP4Q9Y6I8 212 aa1.07□□□□□ -2.24
PTPRC-208ENST00000427110 ROS1P08922 2347 aa1.07□□□□□ -2.24
PTPRC-208ENST00000427110 PTPRQQ9UMZ3 2332 aa1.07□□□□□ -2.24
PTPRC-208ENST00000427110 ARHGAP32A7KAX9 2087 aa1.07□□□□□ -2.24
PTPRC-208ENST00000427110 CEP250Q9BV73 2442 aa1.07□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms