RNA–Protein interactions for RNA: ENST00000426059.1

FN1-208, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 2,388 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-208ENST00000426059 ASIPP42127 132 aa12.79□□□□□ -0.36
FN1-208ENST00000426059 C18orf32Q8TCD1 76 aa12.79□□□□□ -0.36
FN1-208ENST00000426059 PACRGQ96M98 296 aaPredicted RBP12.79□□□□□ -0.36
FN1-208ENST00000426059 CNFNQ9BYD5 112 aa12.79□□□□□ -0.36
FN1-208ENST00000426059 A0A1B0GW15 77 aa12.78□□□□□ -0.36
FN1-208ENST00000426059 RNASE3P12724 160 aaKnown RBP12.78□□□□□ -0.36
FN1-208ENST00000426059 HTN1P15515 57 aa12.78□□□□□ -0.36
FN1-208ENST00000426059 SPANXN1Q5VSR9 72 aa12.78□□□□□ -0.36
FN1-208ENST00000426059 ZNF493Q6ZR52 646 aa12.78□□□□□ -0.36
FN1-208ENST00000426059 M0R381 172 aa12.78□□□□□ -0.36
FN1-208ENST00000426059 SNAI2O43623 268 aa12.77□□□□□ -0.36
FN1-208ENST00000426059 OR5AL1P0C617 328 aa12.77□□□□□ -0.36
FN1-208ENST00000426059 EVI2AP22794 236 aa12.77□□□□□ -0.36
FN1-208ENST00000426059 Q0VG73 95 aa12.77□□□□□ -0.36
FN1-208ENST00000426059 GATD1Q8NB37 220 aa12.77□□□□□ -0.36
FN1-208ENST00000426059 HIST1H2BLQ99880 126 aa12.77□□□□□ -0.36
FN1-208ENST00000426059 A8MTW9 85 aa12.76□□□□□ -0.37
FN1-208ENST00000426059 FAM104BQ5XKR9 115 aa12.76□□□□□ -0.37
FN1-208ENST00000426059 PRIMA1Q86XR5 153 aa12.76□□□□□ -0.37
FN1-208ENST00000426059 STHQ8IWL8 128 aa12.76□□□□□ -0.37
FN1-208ENST00000426059 MDFICQ9P1T7 246 aa12.76□□□□□ -0.37
FN1-208ENST00000426059 STAB1Q9NY15 2570 aa12.76□□□□□ -0.37
FN1-208ENST00000426059 SMKR1H3BMG3 65 aa12.76□□□□□ -0.37
FN1-208ENST00000426059 AMBPP02760 352 aa12.76□□□□□ -0.37
FN1-208ENST00000426059 Q8N1Y9 231 aa12.76□□□□□ -0.37
FN1-208ENST00000426059 PHLDA3Q9Y5J5 127 aa12.76□□□□□ -0.37
FN1-208ENST00000426059 MRPL51Q4U2R6 128 aaKnown RBP12.75□□□□□ -0.37
FN1-208ENST00000426059 OR10J3Q5JRS4 329 aa12.75□□□□□ -0.37
FN1-208ENST00000426059 D6R8Y8 96 aa12.74□□□□□ -0.37
FN1-208ENST00000426059 GAS8-AS1O95177 125 aa12.74□□□□□ -0.37
FN1-208ENST00000426059 BEAN1Q3B7T3 259 aa12.74□□□□□ -0.37
FN1-208ENST00000426059 TMEM191AQ9H0A3 160 aa12.74□□□□□ -0.37
FN1-208ENST00000426059 XCL2Q9UBD3 114 aa12.74□□□□□ -0.37
FN1-208ENST00000426059 IGHV1OR15-1A0A075B7D0 117 aa12.74□□□□□ -0.37
FN1-208ENST00000426059 NCR2O95944 276 aa12.74□□□□□ -0.37
FN1-208ENST00000426059 LBHQ53QV2 105 aaPredicted RBP12.74□□□□□ -0.37
FN1-208ENST00000426059 DMRTA1Q5VZB9 504 aa12.74□□□□□ -0.37
FN1-208ENST00000426059 KCNS1Q96KK3 526 aa12.74□□□□□ -0.37
FN1-208ENST00000426059 C19orf73Q9NVV2 129 aa12.74□□□□□ -0.37
FN1-208ENST00000426059 RNF185Q96GF1 192 aa12.73□□□□□ -0.37
FN1-208ENST00000426059 TDRG1Q3Y452 100 aa12.73□□□□□ -0.37
FN1-208ENST00000426059 C2orf88Q9BSF0 95 aa12.73□□□□□ -0.37
FN1-208ENST00000426059 RAB4AP20338 218 aa12.72□□□□□ -0.37
FN1-208ENST00000426059 JOSD1Q15040 202 aaPredicted RBP12.72□□□□□ -0.37
FN1-208ENST00000426059 TRPT1Q86TN4 253 aaKnown RBP12.72□□□□□ -0.37
FN1-208ENST00000426059 SCRT2Q9NQ03 307 aa12.72□□□□□ -0.37
FN1-208ENST00000426059 IGHV3-16A0A0C4DH30 117 aa12.72□□□□□ -0.37
FN1-208ENST00000426059 CBY3A6NI87 242 aa12.71□□□□□ -0.37
FN1-208ENST00000426059 FAM19A2Q8N3H0 131 aa12.71□□□□□ -0.37
FN1-208ENST00000426059 OR2K2Q8NGT1 345 aa12.71□□□□□ -0.37
FN1-208ENST00000426059 URB1-AS1Q96HZ7 61 aa12.71□□□□□ -0.37
FN1-208ENST00000426059 IGHV4-4A0A075B6R2 117 aa12.71□□□□□ -0.38
FN1-208ENST00000426059 TRAV26-2A0A0B4J265 109 aa12.71□□□□□ -0.38
FN1-208ENST00000426059 RPL35AP18077 110 aaKnown RBP12.71□□□□□ -0.38
FN1-208ENST00000426059 CACNG7P62955 275 aa12.71□□□□□ -0.38
FN1-208ENST00000426059 RNASEKQ6P5S7 137 aaKnown RBP12.71□□□□□ -0.38
FN1-208ENST00000426059 JPT2Q9H910 190 aa12.71□□□□□ -0.38
FN1-208ENST00000426059 GATA1P15976 413 aaPredicted RBP12.7□□□□□ -0.38
FN1-208ENST00000426059 CKS2P33552 79 aa12.7□□□□□ -0.38
FN1-208ENST00000426059 NIT1Q86X76 327 aa12.7□□□□□ -0.38
FN1-208ENST00000426059 C14orf178Q8N769 122 aaPredicted RBP12.7□□□□□ -0.38
FN1-208ENST00000426059 IGHV3OR16-12A0A075B7B8 117 aa12.7□□□□□ -0.38
FN1-208ENST00000426059 PMCHP20382 165 aa12.7□□□□□ -0.38
FN1-208ENST00000426059 DEFB125Q8N687 156 aa12.7□□□□□ -0.38
FN1-208ENST00000426059 PRELID3AQ96N28 172 aa12.7□□□□□ -0.38
FN1-208ENST00000426059 LOC389332A0A1B0GUA5 103 aa12.69□□□□□ -0.38
FN1-208ENST00000426059 TMEM18Q96B42 140 aa12.69□□□□□ -0.38
FN1-208ENST00000426059 MED14OSP0DP75 135 aa12.69□□□□□ -0.38
FN1-208ENST00000426059 PMCHL1Q16048 86 aa12.69□□□□□ -0.38
FN1-208ENST00000426059 C9orf66Q5T8R8 295 aa12.69□□□□□ -0.38
FN1-208ENST00000426059 ORMDL3Q8N138 153 aa12.69□□□□□ -0.38
FN1-208ENST00000426059 ZNF664Q8N3J9 261 aa12.69□□□□□ -0.38
FN1-208ENST00000426059 LINC01587Q99440 93 aa12.69□□□□□ -0.38
FN1-208ENST00000426059 SAMD10Q9BYL1 202 aa12.69□□□□□ -0.38
FN1-208ENST00000426059 NPYP01303 97 aa12.68□□□□□ -0.38
FN1-208ENST00000426059 ESDP10768 282 aa12.68□□□□□ -0.38
FN1-208ENST00000426059 IGLL1P15814 213 aa12.68□□□□□ -0.38
FN1-208ENST00000426059 SMIM15Q7Z3B0 74 aa12.68□□□□□ -0.38
FN1-208ENST00000426059 INSP01308 110 aa12.67□□□□□ -0.38
FN1-208ENST00000426059 C9orf85Q96MD7 179 aa12.67□□□□□ -0.38
FN1-208ENST00000426059 NDUFAF3Q9BU61 184 aa12.67□□□□□ -0.38
FN1-208ENST00000426059 U3KQK5 164 aa12.67□□□□□ -0.38
FN1-208ENST00000426059 COL6A5A8TX70 2615 aa12.67□□□□□ -0.38
FN1-208ENST00000426059 AMTP48728 403 aa12.66□□□□□ -0.38
FN1-208ENST00000426059 TCAPO15273 167 aa12.66□□□□□ -0.38
FN1-208ENST00000426059 GIG44P09565 113 aaPredicted RBP12.66□□□□□ -0.38
FN1-208ENST00000426059 CMC4P56277 68 aaPredicted RBP12.66□□□□□ -0.38
FN1-208ENST00000426059 C1orf158Q8N1D5 194 aa12.66□□□□□ -0.38
FN1-208ENST00000426059 C3orf56Q8N813 242 aa12.66□□□□□ -0.38
FN1-208ENST00000426059 CLUHP3Q96NS8 147 aa12.66□□□□□ -0.38
FN1-208ENST00000426059 TMEM208Q9BTX3 173 aa12.66□□□□□ -0.38
FN1-208ENST00000426059 A0A087WWL8 130 aa12.65□□□□□ -0.38
FN1-208ENST00000426059 IFI27P40305 119 aaPredicted RBP12.65□□□□□ -0.38
FN1-208ENST00000426059 INSL3P51460 131 aa12.65□□□□□ -0.38
FN1-208ENST00000426059 PKD1L1Q8TDX9 2849 aa12.65□□□□□ -0.38
FN1-208ENST00000426059 HSBP1O75506 76 aa12.65□□□□□ -0.38
FN1-208ENST00000426059 MGPP08493 103 aa12.65□□□□□ -0.38
FN1-208ENST00000426059 NUTF2P61970 127 aaKnown RBP12.65□□□□□ -0.38
FN1-208ENST00000426059 FAM110AQ9BQ89 295 aa12.65□□□□□ -0.38
FN1-208ENST00000426059 TRGV11A0A075B6L2 103 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms