RNA–Protein interactions for RNA: ENST00000424937.1

PTCHD3P2-201, Transcript of patched domain containing 3 pseudogene 2, humanhuman

BASIC

Gene PTCHD3P2, Length 1,205 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P2-201ENST00000424937 MRPS16Q9Y3D3 137 aaKnown RBP15.44■□□□□ 0.06
PTCHD3P2-201ENST00000424937 RPL35P42766 123 aaKnown RBP15.43■□□□□ 0.06
PTCHD3P2-201ENST00000424937 MRPL23Q16540 153 aaKnown RBP15.43■□□□□ 0.06
PTCHD3P2-201ENST00000424937 LINC01559Q495D7 138 aa15.43■□□□□ 0.06
PTCHD3P2-201ENST00000424937 PCNPQ8WW12 178 aaKnown RBP15.43■□□□□ 0.06
PTCHD3P2-201ENST00000424937 TXNDC17Q9BRA2 123 aa15.43■□□□□ 0.06
PTCHD3P2-201ENST00000424937 DERL1Q9BUN8 251 aa15.43■□□□□ 0.06
PTCHD3P2-201ENST00000424937 TMSB15BA0A087X1C1 80 aa15.42■□□□□ 0.06
PTCHD3P2-201ENST00000424937 GRIFINA4D1Z8 144 aa15.42■□□□□ 0.06
PTCHD3P2-201ENST00000424937 RS1O15537 224 aa15.42■□□□□ 0.06
PTCHD3P2-201ENST00000424937 GYPEP15421 78 aa15.42■□□□□ 0.06
PTCHD3P2-201ENST00000424937 CFAP126Q5VTH2 177 aa15.42■□□□□ 0.06
PTCHD3P2-201ENST00000424937 PTH2Q96A98 100 aa15.42■□□□□ 0.06
PTCHD3P2-201ENST00000424937 IL36BQ9NZH7 164 aa15.42■□□□□ 0.06
PTCHD3P2-201ENST00000424937 NBDYA0A0U1RRE5 68 aa15.41■□□□□ 0.06
PTCHD3P2-201ENST00000424937 BCL2P10415 239 aa15.41■□□□□ 0.06
PTCHD3P2-201ENST00000424937 MEF2BQ02080 365 aaPredicted RBP15.41■□□□□ 0.06
PTCHD3P2-201ENST00000424937 UPK3BQ9BT76 320 aa15.41■□□□□ 0.06
PTCHD3P2-201ENST00000424937 DNAH2Q9P225 4427 aa15.4■□□□□ 0.06
PTCHD3P2-201ENST00000424937 IGHV3-73A0A0B4J1V6 119 aa15.4■□□□□ 0.06
PTCHD3P2-201ENST00000424937 K7EQD1 137 aa15.4■□□□□ 0.06
PTCHD3P2-201ENST00000424937 GATA1P15976 413 aaPredicted RBP15.4■□□□□ 0.06
PTCHD3P2-201ENST00000424937 SRIP30626 198 aa15.4■□□□□ 0.06
PTCHD3P2-201ENST00000424937 DNLZQ5SXM8 178 aa15.4■□□□□ 0.06
PTCHD3P2-201ENST00000424937 PRR27Q6MZM9 219 aa15.4■□□□□ 0.06
PTCHD3P2-201ENST00000424937 MLST8Q9BVC4 326 aa15.4■□□□□ 0.06
PTCHD3P2-201ENST00000424937 Q9H8V8 135 aa15.4■□□□□ 0.06
PTCHD3P2-201ENST00000424937 RTL8CO15255 209 aa15.39■□□□□ 0.05
PTCHD3P2-201ENST00000424937 ARMS2P0C7Q2 107 aa15.39■□□□□ 0.05
PTCHD3P2-201ENST00000424937 CENPWQ5EE01 88 aa15.39■□□□□ 0.05
PTCHD3P2-201ENST00000424937 LINC00336Q6ZUF6 198 aa15.39■□□□□ 0.05
PTCHD3P2-201ENST00000424937 BOLA1Q9Y3E2 137 aa15.39■□□□□ 0.05
PTCHD3P2-201ENST00000424937 BIRC6Q9NR09 4857 aa15.39■□□□□ 0.05
PTCHD3P2-201ENST00000424937 LOC100131303A0A0U1RQF7 123 aa15.38■□□□□ 0.05
PTCHD3P2-201ENST00000424937 PDE6DO43924 150 aa15.38■□□□□ 0.05
PTCHD3P2-201ENST00000424937 NEGR1Q7Z3B1 354 aa15.38■□□□□ 0.05
PTCHD3P2-201ENST00000424937 VAX2Q9UIW0 290 aa15.38■□□□□ 0.05
PTCHD3P2-201ENST00000424937 CIDEAO60543 219 aa15.37■□□□□ 0.05
PTCHD3P2-201ENST00000424937 RPL19P84098 196 aaKnown RBP15.37■□□□□ 0.05
PTCHD3P2-201ENST00000424937 SYT8Q8NBV8 401 aa15.37■□□□□ 0.05
PTCHD3P2-201ENST00000424937 A8MWV9 139 aa15.36■□□□□ 0.05
PTCHD3P2-201ENST00000424937 BLOC1S1P78537 153 aa15.36■□□□□ 0.05
PTCHD3P2-201ENST00000424937 SOHLH1Q5JUK2 328 aa15.36■□□□□ 0.05
PTCHD3P2-201ENST00000424937 PIK3CD-AS1Q5SR53 167 aa15.36■□□□□ 0.05
PTCHD3P2-201ENST00000424937 C1orf134Q5TEV5 83 aa15.36■□□□□ 0.05
PTCHD3P2-201ENST00000424937 ZNF575Q86XF7 245 aa15.36■□□□□ 0.05
PTCHD3P2-201ENST00000424937 SLC25A29Q8N8R3 303 aa15.36■□□□□ 0.05
PTCHD3P2-201ENST00000424937 PARLQ9H300 379 aa15.36■□□□□ 0.05
PTCHD3P2-201ENST00000424937 PHLDA3Q9Y5J5 127 aa15.36■□□□□ 0.05
PTCHD3P2-201ENST00000424937 TAGLN2P37802 199 aaKnown RBP15.35■□□□□ 0.05
PTCHD3P2-201ENST00000424937 RHOHQ15669 191 aa15.35■□□□□ 0.05
PTCHD3P2-201ENST00000424937 DMRTA1Q5VZB9 504 aa15.35■□□□□ 0.05
PTCHD3P2-201ENST00000424937 LYPD5Q6UWN5 251 aa15.35■□□□□ 0.05
PTCHD3P2-201ENST00000424937 MED9Q9NWA0 146 aa15.35■□□□□ 0.05
PTCHD3P2-201ENST00000424937 DNAH17Q9UFH2 4485 aa15.34■□□□□ 0.05
PTCHD3P2-201ENST00000424937 TRBV6-4A0A1B0GX49 114 aa15.34■□□□□ 0.05
PTCHD3P2-201ENST00000424937 RAB19A4D1S5 217 aa15.34■□□□□ 0.05
PTCHD3P2-201ENST00000424937 PRSS29PA6NIE9 313 aa15.34■□□□□ 0.05
PTCHD3P2-201ENST00000424937 M0R381 172 aa15.34■□□□□ 0.05
PTCHD3P2-201ENST00000424937 NXPH4O95158 308 aa15.34■□□□□ 0.05
PTCHD3P2-201ENST00000424937 MGST1P10620 155 aaKnown RBP15.34■□□□□ 0.05
PTCHD3P2-201ENST00000424937 GNG4P50150 75 aa15.34■□□□□ 0.05
PTCHD3P2-201ENST00000424937 TTC32Q5I0X7 151 aa15.34■□□□□ 0.05
PTCHD3P2-201ENST00000424937 PRADC1Q9BSG0 188 aa15.34■□□□□ 0.05
PTCHD3P2-201ENST00000424937 JPT2Q9H910 190 aa15.34■□□□□ 0.05
PTCHD3P2-201ENST00000424937 SCRT2Q9NQ03 307 aa15.34■□□□□ 0.05
PTCHD3P2-201ENST00000424937 FAT2Q9NYQ8 4349 aa15.32■□□□□ 0.04
PTCHD3P2-201ENST00000424937 SIVA1O15304 175 aa15.32■□□□□ 0.04
PTCHD3P2-201ENST00000424937 IGLV2-8P01709 118 aa15.32■□□□□ 0.04
PTCHD3P2-201ENST00000424937 ZFP2Q6ZN57 461 aa15.32■□□□□ 0.04
PTCHD3P2-201ENST00000424937 ZFP82Q8N141 532 aa15.32■□□□□ 0.04
PTCHD3P2-201ENST00000424937 C6orf223Q8N319 242 aa15.32■□□□□ 0.04
PTCHD3P2-201ENST00000424937 SAMD10Q9BYL1 202 aa15.32■□□□□ 0.04
PTCHD3P2-201ENST00000424937 KRTAP1-5Q9BYS1 174 aa15.32■□□□□ 0.04
PTCHD3P2-201ENST00000424937 CXCL1P09341 107 aa15.31■□□□□ 0.04
PTCHD3P2-201ENST00000424937 MED14OSP0DP75 135 aa15.31■□□□□ 0.04
PTCHD3P2-201ENST00000424937 HECTD4Q9Y4D8 3996 aa15.31■□□□□ 0.04
PTCHD3P2-201ENST00000424937 TRBV20OR9-2A0A075B6H5 130 aa15.3■□□□□ 0.04
PTCHD3P2-201ENST00000424937 FAM74A4Q5TZK3 123 aa15.3■□□□□ 0.04
PTCHD3P2-201ENST00000424937 SH2D6Q7Z4S9 175 aa15.3■□□□□ 0.04
PTCHD3P2-201ENST00000424937 SMIM12Q96EX1 92 aa15.3■□□□□ 0.04
PTCHD3P2-201ENST00000424937 RHODO00212 210 aa15.29■□□□□ 0.04
PTCHD3P2-201ENST00000424937 UFSP1Q6NVU6 142 aa15.29■□□□□ 0.04
PTCHD3P2-201ENST00000424937 Q6ZSN1 163 aa15.29■□□□□ 0.04
PTCHD3P2-201ENST00000424937 LYPD6BQ8NI32 183 aa15.29■□□□□ 0.04
PTCHD3P2-201ENST00000424937 DAZAP1Q96EP5 407 aaKnown RBP15.29■□□□□ 0.04
PTCHD3P2-201ENST00000424937 A0A087WWL8 130 aa15.28■□□□□ 0.04
PTCHD3P2-201ENST00000424937 A0A1W2PPQ1 181 aa15.28■□□□□ 0.04
PTCHD3P2-201ENST00000424937 OR10AG1Q8NH19 301 aa15.28■□□□□ 0.04
PTCHD3P2-201ENST00000424937 SFRP2Q96HF1 295 aa15.28■□□□□ 0.04
PTCHD3P2-201ENST00000424937 RBFOX3A6NFN3 312 aa15.27■□□□□ 0.04
PTCHD3P2-201ENST00000424937 WFDC10BQ8IUB3 73 aa15.27■□□□□ 0.04
PTCHD3P2-201ENST00000424937 A0A1B0GVY2 172 aa15.26■□□□□ 0.03
PTCHD3P2-201ENST00000424937 C19orf71A6NCJ1 209 aa15.26■□□□□ 0.03
PTCHD3P2-201ENST00000424937 SNAI2O43623 268 aa15.26■□□□□ 0.03
PTCHD3P2-201ENST00000424937 MUC21A0A0G2JKD1 596 aa15.25■□□□□ 0.03
PTCHD3P2-201ENST00000424937 MUC21A0A140T8X8 626 aa15.25■□□□□ 0.03
PTCHD3P2-201ENST00000424937 OR5AL1P0C617 328 aa15.25■□□□□ 0.03
PTCHD3P2-201ENST00000424937 TOR2AQ5JU69 321 aa15.25■□□□□ 0.03
PTCHD3P2-201ENST00000424937 C14orf178Q8N769 122 aaPredicted RBP15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms