RNA–Protein interactions for RNA: ENST00000415083.6

SS18-203, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SS18, Length 3,414 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-203ENST00000415083 INSL3P51460 131 aa7.4□□□□□ -1.22
SS18-203ENST00000415083 POM121L12Q8N7R1 296 aa7.4□□□□□ -1.22
SS18-203ENST00000415083 IGLL5B9A064 214 aa7.4□□□□□ -1.22
SS18-203ENST00000415083 BAALCQ8WXS3 180 aa7.4□□□□□ -1.22
SS18-203ENST00000415083 HIST1H4GQ99525 98 aa7.4□□□□□ -1.22
SS18-203ENST00000415083 CLEC2AQ6UVW9 174 aa7.4□□□□□ -1.23
SS18-203ENST00000415083 MOB4Q9Y3A3 225 aa7.4□□□□□ -1.23
SS18-203ENST00000415083 COX6B1P14854 86 aa7.39□□□□□ -1.23
SS18-203ENST00000415083 SRD5A1P18405 259 aa7.39□□□□□ -1.23
SS18-203ENST00000415083 SRSF1Q07955 248 aaKnown RBP eCLIP7.39□□□□□ -1.23
SS18-203ENST00000415083 MYOZ3Q8TDC0 251 aa7.39□□□□□ -1.23
SS18-203ENST00000415083 ZNF479Q96JC4 524 aa7.39□□□□□ -1.23
SS18-203ENST00000415083 SMPXQ9UHP9 88 aa7.39□□□□□ -1.23
SS18-203ENST00000415083 TRAV12-1A0A0B4J245 112 aa7.39□□□□□ -1.23
SS18-203ENST00000415083 IGHV1-69DA0A0B4J2H0 117 aa7.39□□□□□ -1.23
SS18-203ENST00000415083 AVPP01185 164 aa7.39□□□□□ -1.23
SS18-203ENST00000415083 IGHV1-69P01742 117 aa7.39□□□□□ -1.23
SS18-203ENST00000415083 SUMO2P61956 95 aaKnown RBP7.39□□□□□ -1.23
SS18-203ENST00000415083 MORN3Q6PF18 240 aaPredicted RBP7.39□□□□□ -1.23
SS18-203ENST00000415083 C9orf139Q6ZV77 190 aa7.39□□□□□ -1.23
SS18-203ENST00000415083 WFDC12Q8WWY7 111 aa7.39□□□□□ -1.23
SS18-203ENST00000415083 PLEKHB2Q96CS7 222 aa7.39□□□□□ -1.23
SS18-203ENST00000415083 MRAP2Q96G30 205 aa7.39□□□□□ -1.23
SS18-203ENST00000415083 PRO0461Q9UI25 63 aa7.39□□□□□ -1.23
SS18-203ENST00000415083 FAM223BA6NKX1 122 aa7.39□□□□□ -1.23
SS18-203ENST00000415083 SCGB2A1O75556 95 aa7.39□□□□□ -1.23
SS18-203ENST00000415083 CFHR3Q02985 330 aa7.39□□□□□ -1.23
SS18-203ENST00000415083 LY6EQ16553 131 aa7.39□□□□□ -1.23
SS18-203ENST00000415083 C12orf74Q32Q52 190 aa7.39□□□□□ -1.23
SS18-203ENST00000415083 FAM223AQ8IWN6 122 aa7.39□□□□□ -1.23
SS18-203ENST00000415083 CYSLTR1Q9Y271 337 aa7.39□□□□□ -1.23
SS18-203ENST00000415083 IGKV3-7A0A075B6H7 116 aa7.38□□□□□ -1.23
SS18-203ENST00000415083 IGLV4-69A0A075B6H9 119 aa7.38□□□□□ -1.23
SS18-203ENST00000415083 F8VRH5 84 aa7.38□□□□□ -1.23
SS18-203ENST00000415083 NXPH4O95158 308 aa7.38□□□□□ -1.23
SS18-203ENST00000415083 LGALS1P09382 135 aaKnown RBP7.38□□□□□ -1.23
SS18-203ENST00000415083 RNASE4P34096 147 aaKnown RBP7.38□□□□□ -1.23
SS18-203ENST00000415083 C10orf99Q6UWK7 81 aa7.38□□□□□ -1.23
SS18-203ENST00000415083 LENEPQ9Y5L5 61 aa7.38□□□□□ -1.23
SS18-203ENST00000415083 A0A1B0GWB2 263 aa7.38□□□□□ -1.23
SS18-203ENST00000415083 NDUFA4O00483 81 aa7.37□□□□□ -1.23
SS18-203ENST00000415083 DUSP14O95147 198 aaKnown RBP7.37□□□□□ -1.23
SS18-203ENST00000415083 TMEM95Q3KNT9 176 aa7.37□□□□□ -1.23
SS18-203ENST00000415083 IGSF10Q6WRI0 2623 aa7.37□□□□□ -1.23
SS18-203ENST00000415083 A6NDX4 124 aa7.37□□□□□ -1.23
SS18-203ENST00000415083 IGLV1-40P01703 118 aa7.37□□□□□ -1.23
SS18-203ENST00000415083 IGHG2P01859 326 aa7.37□□□□□ -1.23
SS18-203ENST00000415083 FOXI2Q6ZQN5 318 aa7.37□□□□□ -1.23
SS18-203ENST00000415083 LINC00477Q96M19 166 aa7.37□□□□□ -1.23
SS18-203ENST00000415083 SPAG8Q99932 426 aaPredicted RBP7.37□□□□□ -1.23
SS18-203ENST00000415083 SPANXB1Q9NS25 103 aaPredicted RBP7.37□□□□□ -1.23
SS18-203ENST00000415083 USP9XQ93008 2570 aaPredicted RBP7.37□□□□□ -1.23
SS18-203ENST00000415083 GAGE12HA6NDE8 117 aa7.37□□□□□ -1.23
SS18-203ENST00000415083 H7C1H1 209 aa7.37□□□□□ -1.23
SS18-203ENST00000415083 EMP1P54849 157 aa7.37□□□□□ -1.23
SS18-203ENST00000415083 TSPEAR-AS2P59090 65 aa7.37□□□□□ -1.23
SS18-203ENST00000415083 SIGMAR1Q99720 223 aa7.37□□□□□ -1.23
SS18-203ENST00000415083 KLLNB2CW77 178 aa7.36□□□□□ -1.23
SS18-203ENST00000415083 C2orf66Q6UXQ4 117 aa7.36□□□□□ -1.23
SS18-203ENST00000415083 ATP6V0BQ99437 205 aa7.36□□□□□ -1.23
SS18-203ENST00000415083 CHTOPQ9Y3Y2 248 aaKnown RBP7.36□□□□□ -1.23
SS18-203ENST00000415083 KLHL30-AS1Q8NEE0 82 aa7.36□□□□□ -1.23
SS18-203ENST00000415083 DCANP1Q8TF63 244 aa7.36□□□□□ -1.23
SS18-203ENST00000415083 DPH3P1Q9H4G8 78 aa7.36□□□□□ -1.23
SS18-203ENST00000415083 TRAV21A0A0B4J279 112 aa7.36□□□□□ -1.23
SS18-203ENST00000415083 MYMXA0A1B0GTQ4 84 aa7.36□□□□□ -1.23
SS18-203ENST00000415083 IGIPA6NJ69 53 aa7.36□□□□□ -1.23
SS18-203ENST00000415083 BRI3O95415 125 aa7.36□□□□□ -1.23
SS18-203ENST00000415083 PLNP26678 52 aa7.36□□□□□ -1.23
SS18-203ENST00000415083 RPL39P62891 51 aaKnown RBP7.36□□□□□ -1.23
SS18-203ENST00000415083 SCGB3A1Q96QR1 104 aa7.36□□□□□ -1.23
SS18-203ENST00000415083 C20orf78Q9BR46 151 aa7.36□□□□□ -1.23
SS18-203ENST00000415083 NIPBLQ6KC79 2804 aaeCLIP7.36□□□□□ -1.23
SS18-203ENST00000415083 H3BUX3 64 aa7.35□□□□□ -1.23
SS18-203ENST00000415083 AMELXQ99217 191 aa7.35□□□□□ -1.23
SS18-203ENST00000415083 RHPN1-AS1Q9BWJ2 59 aa7.35□□□□□ -1.23
SS18-203ENST00000415083 EIF4EBP3O60516 100 aaPredicted RBP7.35□□□□□ -1.23
SS18-203ENST00000415083 GNLYP22749 145 aa7.35□□□□□ -1.23
SS18-203ENST00000415083 POLR2KP53803 58 aaKnown RBP7.35□□□□□ -1.23
SS18-203ENST00000415083 Q5PR19 223 aa7.35□□□□□ -1.23
SS18-203ENST00000415083 OVOL1O14753 267 aa7.34□□□□□ -1.23
SS18-203ENST00000415083 TGFAP01135 160 aa7.34□□□□□ -1.23
SS18-203ENST00000415083 MGPP08493 103 aa7.34□□□□□ -1.23
SS18-203ENST00000415083 SMCPP49901 116 aaPredicted RBP7.34□□□□□ -1.23
SS18-203ENST00000415083 CD300EQ496F6 205 aaPredicted RBP7.34□□□□□ -1.23
SS18-203ENST00000415083 GAGE13Q4V321 117 aa7.34□□□□□ -1.23
SS18-203ENST00000415083 IGHV4-30-2A0A087WSY4 118 aa7.34□□□□□ -1.23
SS18-203ENST00000415083 C11orf86A6NJI1 115 aa7.34□□□□□ -1.23
SS18-203ENST00000415083 LINC01619G3V211 115 aa7.34□□□□□ -1.23
SS18-203ENST00000415083 SLC25A16P16260 332 aa7.34□□□□□ -1.23
SS18-203ENST00000415083 ASIPP42127 132 aa7.34□□□□□ -1.23
SS18-203ENST00000415083 SCGB2A2Q13296 93 aa7.34□□□□□ -1.23
SS18-203ENST00000415083 SUMO4Q6EEV6 95 aa7.34□□□□□ -1.23
SS18-203ENST00000415083 PRADC1Q9BSG0 188 aa7.34□□□□□ -1.23
SS18-203ENST00000415083 CENPEQ02224 2701 aa7.34□□□□□ -1.23
SS18-203ENST00000415083 SPG11Q96JI7 2443 aa7.34□□□□□ -1.23
SS18-203ENST00000415083 PKD1L2Q7Z442 2459 aa7.34□□□□□ -1.23
SS18-203ENST00000415083 OR10J6PQ8NGY7 276 aa7.34□□□□□ -1.23
SS18-203ENST00000415083 ZNRF2Q8NHG8 242 aa7.34□□□□□ -1.23
SS18-203ENST00000415083 PHLDA3Q9Y5J5 127 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 101.5 ms