RNA–Protein interactions for RNA: ENST00000415055.2

PTPRK-210, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 782 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-210ENST00000415055 COPZ2Q9P299 210 aa2.91□□□□□ -1.94
PTPRK-210ENST00000415055 SSR3Q9UNL2 185 aa2.91□□□□□ -1.94
PTPRK-210ENST00000415055 KLF12Q9Y4X4 402 aa2.91□□□□□ -1.94
PTPRK-210ENST00000415055 IGKV1D-37A0A075B6S9 117 aa2.9□□□□□ -1.95
PTPRK-210ENST00000415055 A0A0A6YYH2 397 aa2.9□□□□□ -1.95
PTPRK-210ENST00000415055 A0A0U1RQV1 116 aa2.9□□□□□ -1.95
PTPRK-210ENST00000415055 C3orf85A0A1B0GTC6 90 aa2.9□□□□□ -1.95
PTPRK-210ENST00000415055 A6NJ64 397 aa2.9□□□□□ -1.95
PTPRK-210ENST00000415055 IBA57-AS1B1ANH7 110 aa2.9□□□□□ -1.95
PTPRK-210ENST00000415055 SFTA3P0C7M3 94 aa2.9□□□□□ -1.95
PTPRK-210ENST00000415055 RAB4AP20338 218 aa2.9□□□□□ -1.95
PTPRK-210ENST00000415055 RAB5AP20339 215 aa2.9□□□□□ -1.95
PTPRK-210ENST00000415055 ZNF726P1Q15940 193 aa2.9□□□□□ -1.95
PTPRK-210ENST00000415055 TDRG1Q3Y452 100 aa2.9□□□□□ -1.95
PTPRK-210ENST00000415055 NMSQ5H8A3 153 aa2.9□□□□□ -1.95
PTPRK-210ENST00000415055 LELP1Q5T871 98 aa2.9□□□□□ -1.95
PTPRK-210ENST00000415055 Q6ZRU5 148 aa2.9□□□□□ -1.95
PTPRK-210ENST00000415055 LGI3Q8N145 548 aa2.9□□□□□ -1.95
PTPRK-210ENST00000415055 ZNF680Q8NEM1 530 aa2.9□□□□□ -1.95
PTPRK-210ENST00000415055 TRGV9Q99603 122 aa2.9□□□□□ -1.95
PTPRK-210ENST00000415055 PYGO2Q9BRQ0 406 aa2.9□□□□□ -1.95
PTPRK-210ENST00000415055 MRPL32Q9BYC8 188 aaKnown RBP2.9□□□□□ -1.95
PTPRK-210ENST00000415055 NDUFB11Q9NX14 153 aa2.9□□□□□ -1.95
PTPRK-210ENST00000415055 LINC00854A0A1B0GVQ3 168 aa2.89□□□□□ -1.95
PTPRK-210ENST00000415055 GATCO43716 136 aaKnown RBP2.89□□□□□ -1.95
PTPRK-210ENST00000415055 SPINK4O60575 86 aa2.89□□□□□ -1.95
PTPRK-210ENST00000415055 TNFAIP8O95379 198 aa2.89□□□□□ -1.95
PTPRK-210ENST00000415055 CFDP00746 253 aaPredicted RBP2.89□□□□□ -1.95
PTPRK-210ENST00000415055 ORM1P02763 201 aa2.89□□□□□ -1.95
PTPRK-210ENST00000415055 OR5G3P0C626 314 aa2.89□□□□□ -1.95
PTPRK-210ENST00000415055 RPL7P18124 248 aaKnown RBP2.89□□□□□ -1.95
PTPRK-210ENST00000415055 CXCL3P19876 107 aa2.89□□□□□ -1.95
PTPRK-210ENST00000415055 RNASE4P34096 147 aaKnown RBP2.89□□□□□ -1.95
PTPRK-210ENST00000415055 SDC2P34741 201 aa2.89□□□□□ -1.95
PTPRK-210ENST00000415055 PRSS3P35030 304 aa2.89□□□□□ -1.95
PTPRK-210ENST00000415055 HERVK_113P61574 105 aa2.89□□□□□ -1.95
PTPRK-210ENST00000415055 LINC01556Q5JQF7 62 aa2.89□□□□□ -1.95
PTPRK-210ENST00000415055 C9orf129Q5T035 196 aaKnown RBP2.89□□□□□ -1.95
PTPRK-210ENST00000415055 EIF4E3Q8N5X7 224 aaKnown RBP2.89□□□□□ -1.95
PTPRK-210ENST00000415055 PACRGLQ8N7B6 248 aa2.89□□□□□ -1.95
PTPRK-210ENST00000415055 LINC00469Q8N7U9 141 aa2.89□□□□□ -1.95
PTPRK-210ENST00000415055 S100A16Q96FQ6 103 aaKnown RBP2.89□□□□□ -1.95
PTPRK-210ENST00000415055 VCXQ9H320 206 aa2.89□□□□□ -1.95
PTPRK-210ENST00000415055 C8orf4Q9NR00 106 aa2.89□□□□□ -1.95
PTPRK-210ENST00000415055 TXNL4BQ9NX01 149 aaKnown RBP2.89□□□□□ -1.95
PTPRK-210ENST00000415055 HIGD1AQ9Y241 93 aa2.89□□□□□ -1.95
PTPRK-210ENST00000415055 U3KQ87 197 aa2.89□□□□□ -1.95
PTPRK-210ENST00000415055 IGKV2D-24A0A075B6R9 120 aa2.88□□□□□ -1.95
PTPRK-210ENST00000415055 IGKV1OR2-108A0A075B7D4 117 aa2.88□□□□□ -1.95
PTPRK-210ENST00000415055 TRAV8-3A0A0A6YYJ7 113 aa2.88□□□□□ -1.95
PTPRK-210ENST00000415055 A0A0D9SG52 128 aa2.88□□□□□ -1.95
PTPRK-210ENST00000415055 C7orf71A4D174 169 aa2.88□□□□□ -1.95
PTPRK-210ENST00000415055 SULT1A3P0DMM9 295 aa2.88□□□□□ -1.95
PTPRK-210ENST00000415055 SULT1A4P0DMN0 295 aa2.88□□□□□ -1.95
PTPRK-210ENST00000415055 BTCP35070 178 aa2.88□□□□□ -1.95
PTPRK-210ENST00000415055 FGF8P55075 233 aaPredicted RBP2.88□□□□□ -1.95
PTPRK-210ENST00000415055 TCL1AP56279 114 aa2.88□□□□□ -1.95
PTPRK-210ENST00000415055 UBE2MP61081 183 aaKnown RBP2.88□□□□□ -1.95
PTPRK-210ENST00000415055 AKR1C1Q04828 323 aa2.88□□□□□ -1.95
PTPRK-210ENST00000415055 ZNF846Q147U1 533 aa2.88□□□□□ -1.95
PTPRK-210ENST00000415055 Q8N976 141 aa2.88□□□□□ -1.95
PTPRK-210ENST00000415055 C11orf72Q8NBR9 251 aa2.88□□□□□ -1.95
PTPRK-210ENST00000415055 ATP6V0E2Q8NHE4 81 aa2.88□□□□□ -1.95
PTPRK-210ENST00000415055 ZFAND1Q8TCF1 268 aa2.88□□□□□ -1.95
PTPRK-210ENST00000415055 DTD1Q8TEA8 209 aa2.88□□□□□ -1.95
PTPRK-210ENST00000415055 DPH3Q96FX2 82 aa2.88□□□□□ -1.95
PTPRK-210ENST00000415055 VCX3AQ9NNX9 186 aa2.88□□□□□ -1.95
PTPRK-210ENST00000415055 IGKV3D-20A0A0C4DH25 116 aa2.87□□□□□ -1.95
PTPRK-210ENST00000415055 H3BRN7 92 aa2.87□□□□□ -1.95
PTPRK-210ENST00000415055 PHOX2AO14813 284 aa2.87□□□□□ -1.95
PTPRK-210ENST00000415055 MPDU1O75352 247 aa2.87□□□□□ -1.95
PTPRK-210ENST00000415055 PITX3O75364 302 aa2.87□□□□□ -1.95
PTPRK-210ENST00000415055 HYPMO75409 117 aa2.87□□□□□ -1.95
PTPRK-210ENST00000415055 IL5P05113 134 aa2.87□□□□□ -1.95
PTPRK-210ENST00000415055 SLC25A5P05141 298 aaKnown RBP2.87□□□□□ -1.95
PTPRK-210ENST00000415055 IAPPP10997 89 aa2.87□□□□□ -1.95
PTPRK-210ENST00000415055 BTN1A1Q13410 526 aa2.87□□□□□ -1.95
PTPRK-210ENST00000415055 SCGB2B2Q4G0G5 96 aa2.87□□□□□ -1.95
PTPRK-210ENST00000415055 UBE2NLQ5JXB2 153 aa2.87□□□□□ -1.95
PTPRK-210ENST00000415055 LCN15Q6UWW0 184 aa2.87□□□□□ -1.95
PTPRK-210ENST00000415055 SH2D6Q7Z4S9 175 aa2.87□□□□□ -1.95
PTPRK-210ENST00000415055 SNX29P2Q8IUI4 249 aa2.87□□□□□ -1.95
PTPRK-210ENST00000415055 SELENOHQ8IZQ5 122 aaKnown RBP2.87□□□□□ -1.95
PTPRK-210ENST00000415055 OR1S1Q8NH92 325 aa2.87□□□□□ -1.95
PTPRK-210ENST00000415055 LHFPL5Q8TAF8 219 aa2.87□□□□□ -1.95
PTPRK-210ENST00000415055 ZNF431Q8TF32 576 aaPredicted RBP2.87□□□□□ -1.95
PTPRK-210ENST00000415055 SLC50A1Q9BRV3 221 aa2.87□□□□□ -1.95
PTPRK-210ENST00000415055 SHANK2-AS3Q9BTD1 123 aa2.87□□□□□ -1.95
PTPRK-210ENST00000415055 TMEM222Q9H0R3 208 aa2.87□□□□□ -1.95
PTPRK-210ENST00000415055 DUSP21Q9H596 190 aa2.87□□□□□ -1.95
PTPRK-210ENST00000415055 CACFD1Q9UGQ2 172 aa2.87□□□□□ -1.95
PTPRK-210ENST00000415055 TP53TG3Q9ULZ0 132 aa2.87□□□□□ -1.95
PTPRK-210ENST00000415055 ANAPC10Q9UM13 185 aa2.87□□□□□ -1.95
PTPRK-210ENST00000415055 C14orf166Q9Y224 244 aaKnown RBP2.87□□□□□ -1.95
PTPRK-210ENST00000415055 SMIM31A0A1B0GVY4 71 aa2.86□□□□□ -1.95
PTPRK-210ENST00000415055 FABP12A6NFH5 140 aa2.86□□□□□ -1.95
PTPRK-210ENST00000415055 GGTLC3B5MD39 225 aa2.86□□□□□ -1.95
PTPRK-210ENST00000415055 CDS2O95674 445 aa2.86□□□□□ -1.95
PTPRK-210ENST00000415055 GPX1P07203 203 aa2.86□□□□□ -1.95
PTPRK-210ENST00000415055 LINC00869P0C866 280 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 170.3 ms