RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 TMEM189A5PLL7 270 aa3.44□□□□□ -1.86
VPS41-205ENST00000414632 MAP1LC3B2A6NCE7 125 aa3.44□□□□□ -1.86
VPS41-205ENST00000414632 KLLNB2CW77 178 aa3.44□□□□□ -1.86
VPS41-205ENST00000414632 GGTLC3B5MD39 225 aa3.44□□□□□ -1.86
VPS41-205ENST00000414632 F6UZH7 168 aa3.44□□□□□ -1.86
VPS41-205ENST00000414632 H7BYZ3 331 aa3.44□□□□□ -1.86
VPS41-205ENST00000414632 TAAR5O14804 337 aa3.44□□□□□ -1.86
VPS41-205ENST00000414632 BCL2L11O43521 198 aa3.44□□□□□ -1.86
VPS41-205ENST00000414632 CXorf1O96002 111 aa3.44□□□□□ -1.86
VPS41-205ENST00000414632 MBP02144 154 aa3.44□□□□□ -1.86
VPS41-205ENST00000414632 ZNF138P52744 262 aa3.44□□□□□ -1.86
VPS41-205ENST00000414632 LINC01547P58512 204 aaPredicted RBP3.44□□□□□ -1.86
VPS41-205ENST00000414632 TAS2R60P59551 318 aa3.44□□□□□ -1.86
VPS41-205ENST00000414632 ERVFC1-1P60608 527 aa3.44□□□□□ -1.86
VPS41-205ENST00000414632 DAD1P61803 113 aa3.44□□□□□ -1.86
VPS41-205ENST00000414632 IFITM2Q01629 132 aa3.44□□□□□ -1.86
VPS41-205ENST00000414632 ZNF345Q14585 488 aa3.44□□□□□ -1.86
VPS41-205ENST00000414632 MUC21Q5SSG8 566 aa3.44□□□□□ -1.86
VPS41-205ENST00000414632 AKR1C8PQ5T2L2 129 aa3.44□□□□□ -1.86
VPS41-205ENST00000414632 ZFAND2AQ8N6M9 145 aa3.44□□□□□ -1.86
VPS41-205ENST00000414632 CMTM2Q8TAZ6 248 aa3.44□□□□□ -1.86
VPS41-205ENST00000414632 PRAC1Q96KF2 57 aa3.44□□□□□ -1.86
VPS41-205ENST00000414632 FAM19A4Q96LR4 140 aa3.44□□□□□ -1.86
VPS41-205ENST00000414632 LINC00477Q96M19 166 aa3.44□□□□□ -1.86
VPS41-205ENST00000414632 ODF3Q96PU9 254 aa3.44□□□□□ -1.86
VPS41-205ENST00000414632 MAP1LC3BQ9GZQ8 125 aa3.44□□□□□ -1.86
VPS41-205ENST00000414632 NOP10Q9NPE3 64 aaKnown RBP3.44□□□□□ -1.86
VPS41-205ENST00000414632 OTORQ9NRC9 128 aa3.44□□□□□ -1.86
VPS41-205ENST00000414632 NAGKQ9UJ70 344 aa3.44□□□□□ -1.86
VPS41-205ENST00000414632 TP53TG3Q9ULZ0 132 aa3.44□□□□□ -1.86
VPS41-205ENST00000414632 APLNQ9ULZ1 77 aa3.44□□□□□ -1.86
VPS41-205ENST00000414632 EPPK1P58107 5090 aaKnown RBP3.44□□□□□ -1.86
VPS41-205ENST00000414632 A0A0D9SG52 128 aa3.43□□□□□ -1.86
VPS41-205ENST00000414632 HMSDA8MTL9 139 aa3.43□□□□□ -1.86
VPS41-205ENST00000414632 C11orf94C9JXX5 98 aa3.43□□□□□ -1.86
VPS41-205ENST00000414632 CRISP2P16562 243 aa3.43□□□□□ -1.86
VPS41-205ENST00000414632 S100A1P23297 94 aa3.43□□□□□ -1.86
VPS41-205ENST00000414632 LGALSLQ3ZCW2 172 aaPredicted RBP3.43□□□□□ -1.86
VPS41-205ENST00000414632 FAM74A1Q5RGS3 127 aa3.43□□□□□ -1.86
VPS41-205ENST00000414632 ERASQ7Z444 233 aa3.43□□□□□ -1.86
VPS41-205ENST00000414632 PRNTQ86SH4 94 aa3.43□□□□□ -1.86
VPS41-205ENST00000414632 AKAP14Q86UN6 197 aa3.43□□□□□ -1.86
VPS41-205ENST00000414632 LYPD1Q8N2G4 141 aa3.43□□□□□ -1.86
VPS41-205ENST00000414632 TMEM256Q8N2U0 113 aa3.43□□□□□ -1.86
VPS41-205ENST00000414632 LINC00469Q8N7U9 141 aa3.43□□□□□ -1.86
VPS41-205ENST00000414632 FAM213BQ8TBF2 198 aa3.43□□□□□ -1.86
VPS41-205ENST00000414632 RXFP4Q8TDU9 374 aa3.43□□□□□ -1.86
VPS41-205ENST00000414632 TMEM263Q8WUH6 116 aaKnown RBP3.43□□□□□ -1.86
VPS41-205ENST00000414632 TVP23CQ96ET8 276 aa3.43□□□□□ -1.86
VPS41-205ENST00000414632 C16orf74Q96GX8 76 aa3.43□□□□□ -1.86
VPS41-205ENST00000414632 LINC00479Q96M42 142 aa3.43□□□□□ -1.86
VPS41-205ENST00000414632 FAM218AQ96MZ4 157 aa3.43□□□□□ -1.86
VPS41-205ENST00000414632 NACAE9PAV3 2078 aa3.43□□□□□ -1.86
VPS41-205ENST00000414632 DNAH17Q9UFH2 4485 aa3.42□□□□□ -1.86
VPS41-205ENST00000414632 IGHV1OR15-1A0A075B7D0 117 aa3.42□□□□□ -1.86
VPS41-205ENST00000414632 TRGV1A0A0A0MS02 117 aa3.42□□□□□ -1.86
VPS41-205ENST00000414632 RBAKDNA6NC62 111 aa3.42□□□□□ -1.86
VPS41-205ENST00000414632 LYRM9A8MSI8 78 aa3.42□□□□□ -1.86
VPS41-205ENST00000414632 F5H768 121 aa3.42□□□□□ -1.86
VPS41-205ENST00000414632 ZNF324O75467 553 aaPredicted RBP3.42□□□□□ -1.86
VPS41-205ENST00000414632 IFNA7P01567 189 aa3.42□□□□□ -1.86
VPS41-205ENST00000414632 IGHV3-53P01767 116 aa3.42□□□□□ -1.86
VPS41-205ENST00000414632 TCRAP04437 139 aa3.42□□□□□ -1.86
VPS41-205ENST00000414632 TPT1P13693 172 aaKnown RBP3.42□□□□□ -1.86
VPS41-205ENST00000414632 ATP5G3P48201 142 aa3.42□□□□□ -1.86
VPS41-205ENST00000414632 ZNF80P51504 273 aaPredicted RBP3.42□□□□□ -1.86
VPS41-205ENST00000414632 Q6ZTI0 123 aa3.42□□□□□ -1.86
VPS41-205ENST00000414632 SMIM29Q86T20 159 aa3.42□□□□□ -1.86
VPS41-205ENST00000414632 TCTE3Q8IZS6 198 aa3.42□□□□□ -1.86
VPS41-205ENST00000414632 EIF4E3Q8N5X7 224 aaKnown RBP3.42□□□□□ -1.86
VPS41-205ENST00000414632 TMEM75Q8N9X5 138 aa3.42□□□□□ -1.86
VPS41-205ENST00000414632 C5orf17Q8NAS9 161 aa3.42□□□□□ -1.86
VPS41-205ENST00000414632 SUN5Q8TC36 379 aa3.42□□□□□ -1.86
VPS41-205ENST00000414632 SFT2D1Q8WV19 159 aa3.42□□□□□ -1.86
VPS41-205ENST00000414632 C20orf144Q9BQM9 153 aa3.42□□□□□ -1.86
VPS41-205ENST00000414632 PYGO2Q9BRQ0 406 aa3.42□□□□□ -1.86
VPS41-205ENST00000414632 NDUFAF3Q9BU61 184 aa3.42□□□□□ -1.86
VPS41-205ENST00000414632 TREM1Q9NP99 234 aa3.42□□□□□ -1.86
VPS41-205ENST00000414632 TMEM167BQ9NRX6 74 aa3.42□□□□□ -1.86
VPS41-205ENST00000414632 MRPL16Q9NX20 251 aaKnown RBP3.42□□□□□ -1.86
VPS41-205ENST00000414632 PSG8Q9UQ74 426 aa3.42□□□□□ -1.86
VPS41-205ENST00000414632 KLF12Q9Y4X4 402 aa3.42□□□□□ -1.86
VPS41-205ENST00000414632 TIMM8BQ9Y5J9 83 aaPredicted RBP3.42□□□□□ -1.86
VPS41-205ENST00000414632 A0A0J9YY99 117 aa3.41□□□□□ -1.86
VPS41-205ENST00000414632 TEX48A0A1B0GUV7 120 aa3.41□□□□□ -1.86
VPS41-205ENST00000414632 FAM74A7A6NL05 159 aa3.41□□□□□ -1.86
VPS41-205ENST00000414632 PEX7O00628 323 aa3.41□□□□□ -1.86
VPS41-205ENST00000414632 GNRH2O43555 120 aa3.41□□□□□ -1.86
VPS41-205ENST00000414632 GCGP01275 180 aa3.41□□□□□ -1.86
VPS41-205ENST00000414632 IGLV2-11P01706 119 aa3.41□□□□□ -1.86
VPS41-205ENST00000414632 C1QBP02746 253 aa3.41□□□□□ -1.86
VPS41-205ENST00000414632 SEC11BP0C7V7 166 aa3.41□□□□□ -1.86
VPS41-205ENST00000414632 NKX2-5P52952 324 aaPredicted RBP3.41□□□□□ -1.86
VPS41-205ENST00000414632 FLI1Q01543 452 aaPredicted RBP3.41□□□□□ -1.86
VPS41-205ENST00000414632 OR5I1Q13606 314 aa3.41□□□□□ -1.86
VPS41-205ENST00000414632 TMEM183BQ1AE95 376 aa3.41□□□□□ -1.86
VPS41-205ENST00000414632 ZNF493Q6ZR52 646 aa3.41□□□□□ -1.86
VPS41-205ENST00000414632 TMEM183AQ8IXX5 376 aa3.41□□□□□ -1.86
VPS41-205ENST00000414632 LINC00518Q8N0U6 118 aa3.41□□□□□ -1.86
VPS41-205ENST00000414632 C9orf62Q8N4C0 152 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms