RNA–Protein interactions for RNA: ENST00000412342.5

HDAC8-210, Transcript of histone deacetylase 8, humanhuman

TSL 1 (best)

Gene HDAC8, Length 679 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-210ENST00000412342 SCRT2Q9NQ03 307 aa9.16□□□□□ -0.94
HDAC8-210ENST00000412342 MED9Q9NWA0 146 aa9.16□□□□□ -0.94
HDAC8-210ENST00000412342 DNAH17Q9UFH2 4485 aa9.15□□□□□ -0.94
HDAC8-210ENST00000412342 GRIFINA4D1Z8 144 aa9.15□□□□□ -0.94
HDAC8-210ENST00000412342 H3BVH4 76 aa9.15□□□□□ -0.94
HDAC8-210ENST00000412342 NUDT3O95989 172 aa9.15□□□□□ -0.94
HDAC8-210ENST00000412342 CRYBA4P53673 196 aa9.15□□□□□ -0.94
HDAC8-210ENST00000412342 RPL19P84098 196 aaKnown RBP9.15□□□□□ -0.94
HDAC8-210ENST00000412342 ZNF876PQ49A33 203 aa9.15□□□□□ -0.94
HDAC8-210ENST00000412342 SMIM12Q96EX1 92 aa9.15□□□□□ -0.94
HDAC8-210ENST00000412342 TMSB15BA0A087X1C1 80 aa9.14□□□□□ -0.95
HDAC8-210ENST00000412342 A0A096LPF7 62 aa9.14□□□□□ -0.95
HDAC8-210ENST00000412342 C19orf71A6NCJ1 209 aa9.14□□□□□ -0.95
HDAC8-210ENST00000412342 C9JCJ5 164 aa9.14□□□□□ -0.95
HDAC8-210ENST00000412342 TMEM250H0YL14 139 aa9.14□□□□□ -0.95
HDAC8-210ENST00000412342 RS1O15537 224 aa9.14□□□□□ -0.95
HDAC8-210ENST00000412342 NDUFS6O75380 124 aaKnown RBP9.14□□□□□ -0.95
HDAC8-210ENST00000412342 CXCL1P09341 107 aa9.14□□□□□ -0.95
HDAC8-210ENST00000412342 ARMS2P0C7Q2 107 aa9.14□□□□□ -0.95
HDAC8-210ENST00000412342 GNG4P50150 75 aa9.14□□□□□ -0.95
HDAC8-210ENST00000412342 RNF212Q495C1 297 aa9.14□□□□□ -0.95
HDAC8-210ENST00000412342 TOR2AQ5JU69 321 aa9.14□□□□□ -0.95
HDAC8-210ENST00000412342 PIK3CD-AS1Q5SR53 167 aa9.14□□□□□ -0.95
HDAC8-210ENST00000412342 CFAP126Q5VTH2 177 aa9.14□□□□□ -0.95
HDAC8-210ENST00000412342 PRR27Q6MZM9 219 aa9.14□□□□□ -0.95
HDAC8-210ENST00000412342 PCNPQ8WW12 178 aaKnown RBP9.14□□□□□ -0.95
HDAC8-210ENST00000412342 FAM210AQ96ND0 272 aa9.14□□□□□ -0.95
HDAC8-210ENST00000412342 PRO0255Q9UI72 69 aa9.14□□□□□ -0.95
HDAC8-210ENST00000412342 EPPK1P58107 5090 aaKnown RBP9.14□□□□□ -0.95
HDAC8-210ENST00000412342 S100A4P26447 101 aaKnown RBP9.13□□□□□ -0.95
HDAC8-210ENST00000412342 OR4C5Q8NGB2 326 aa9.13□□□□□ -0.95
HDAC8-210ENST00000412342 PARLQ9H300 379 aa9.13□□□□□ -0.95
HDAC8-210ENST00000412342 HHLA3Q9XRX5 114 aa9.13□□□□□ -0.95
HDAC8-210ENST00000412342 MED14OSP0DP75 135 aa9.12□□□□□ -0.95
HDAC8-210ENST00000412342 GATA1P15976 413 aaPredicted RBP9.12□□□□□ -0.95
HDAC8-210ENST00000412342 SLAQ13239 276 aa9.12□□□□□ -0.95
HDAC8-210ENST00000412342 DMRTA1Q5VZB9 504 aa9.12□□□□□ -0.95
HDAC8-210ENST00000412342 SSBP4Q9BWG4 385 aaPredicted RBP9.12□□□□□ -0.95
HDAC8-210ENST00000412342 LINC00588Q9Y4M8 146 aa9.12□□□□□ -0.95
HDAC8-210ENST00000412342 FAT2Q9NYQ8 4349 aa9.12□□□□□ -0.95
HDAC8-210ENST00000412342 FRAS1Q86XX4 4008 aa9.11□□□□□ -0.95
HDAC8-210ENST00000412342 TRGV4A0A0C4DH28 118 aa9.11□□□□□ -0.95
HDAC8-210ENST00000412342 K7EN84 100 aa9.11□□□□□ -0.95
HDAC8-210ENST00000412342 PAX4O43316 350 aa9.11□□□□□ -0.95
HDAC8-210ENST00000412342 SNAI2O43623 268 aa9.11□□□□□ -0.95
HDAC8-210ENST00000412342 NXPH4O95158 308 aa9.11□□□□□ -0.95
HDAC8-210ENST00000412342 SRP19P09132 144 aaKnown RBP9.11□□□□□ -0.95
HDAC8-210ENST00000412342 MGST1P10620 155 aaKnown RBP9.11□□□□□ -0.95
HDAC8-210ENST00000412342 UFSP1Q6NVU6 142 aa9.11□□□□□ -0.95
HDAC8-210ENST00000412342 JPT2Q9H910 190 aa9.11□□□□□ -0.95
HDAC8-210ENST00000412342 CIDEAO60543 219 aa9.1□□□□□ -0.95
HDAC8-210ENST00000412342 FAM3BP58499 235 aaPredicted RBP9.1□□□□□ -0.95
HDAC8-210ENST00000412342 ESRGQ1W209 222 aa9.1□□□□□ -0.95
HDAC8-210ENST00000412342 UBE2DNLQ8IWF7 75 aa9.1□□□□□ -0.95
HDAC8-210ENST00000412342 ZNRF2Q8NHG8 242 aa9.1□□□□□ -0.95
HDAC8-210ENST00000412342 OCC1Q8TAD7 63 aa9.1□□□□□ -0.95
HDAC8-210ENST00000412342 A8MWV9 139 aa9.09□□□□□ -0.95
HDAC8-210ENST00000412342 K7EQD1 137 aa9.09□□□□□ -0.95
HDAC8-210ENST00000412342 OR5AL1P0C617 328 aa9.09□□□□□ -0.95
HDAC8-210ENST00000412342 IGLC6P0CF74 106 aa9.09□□□□□ -0.95
HDAC8-210ENST00000412342 ZFP2Q6ZN57 461 aa9.09□□□□□ -0.95
HDAC8-210ENST00000412342 OR10AG1Q8NH19 301 aa9.09□□□□□ -0.95
HDAC8-210ENST00000412342 SAMD10Q9BYL1 202 aa9.09□□□□□ -0.95
HDAC8-210ENST00000412342 EIF5A2Q9GZV4 153 aaKnown RBP9.09□□□□□ -0.95
HDAC8-210ENST00000412342 PHLDA3Q9Y5J5 127 aa9.09□□□□□ -0.95
HDAC8-210ENST00000412342 ICOSQ9Y6W8 199 aa9.09□□□□□ -0.95
HDAC8-210ENST00000412342 IGHV3-73A0A0B4J1V6 119 aa9.08□□□□□ -0.96
HDAC8-210ENST00000412342 LOC100131303A0A0U1RQF7 123 aa9.08□□□□□ -0.96
HDAC8-210ENST00000412342 C9JQL5 133 aa9.08□□□□□ -0.96
HDAC8-210ENST00000412342 GYPEP15421 78 aa9.08□□□□□ -0.96
HDAC8-210ENST00000412342 CCL18P55774 89 aa9.08□□□□□ -0.96
HDAC8-210ENST00000412342 Q6ZSN1 163 aa9.08□□□□□ -0.96
HDAC8-210ENST00000412342 ZFP82Q8N141 532 aa9.08□□□□□ -0.96
HDAC8-210ENST00000412342 SLC25A29Q8N8R3 303 aa9.08□□□□□ -0.96
HDAC8-210ENST00000412342 SYT8Q8NBV8 401 aa9.08□□□□□ -0.96
HDAC8-210ENST00000412342 SFRP2Q96HF1 295 aa9.08□□□□□ -0.96
HDAC8-210ENST00000412342 UPK3BQ9BT76 320 aa9.08□□□□□ -0.96
HDAC8-210ENST00000412342 TRBV6-4A0A1B0GX49 114 aa9.07□□□□□ -0.96
HDAC8-210ENST00000412342 M0R381 172 aa9.07□□□□□ -0.96
HDAC8-210ENST00000412342 CRYGDP07320 174 aa9.07□□□□□ -0.96
HDAC8-210ENST00000412342 GZMBP10144 247 aa9.07□□□□□ -0.96
HDAC8-210ENST00000412342 SRSF3P84103 164 aaKnown RBP9.07□□□□□ -0.96
HDAC8-210ENST00000412342 MRPL23Q16540 153 aaKnown RBP9.07□□□□□ -0.96
HDAC8-210ENST00000412342 Q6ZR54 194 aa9.07□□□□□ -0.96
HDAC8-210ENST00000412342 NUDT10Q8NFP7 164 aa9.07□□□□□ -0.96
HDAC8-210ENST00000412342 OR2D3Q8NGH3 330 aa9.07□□□□□ -0.96
HDAC8-210ENST00000412342 NUDT11Q96G61 164 aa9.07□□□□□ -0.96
HDAC8-210ENST00000412342 BIN3Q9NQY0 253 aa9.07□□□□□ -0.96
HDAC8-210ENST00000412342 MRPS16Q9Y3D3 137 aaKnown RBP9.07□□□□□ -0.96
HDAC8-210ENST00000412342 P01737 135 aa9.06□□□□□ -0.96
HDAC8-210ENST00000412342 RPS20P60866 119 aaKnown RBP9.06□□□□□ -0.96
HDAC8-210ENST00000412342 RHOHQ15669 191 aa9.06□□□□□ -0.96
HDAC8-210ENST00000412342 DAZAP1Q96EP5 407 aaKnown RBP9.06□□□□□ -0.96
HDAC8-210ENST00000412342 RNASE7Q9H1E1 156 aaKnown RBP9.06□□□□□ -0.96
HDAC8-210ENST00000412342 LY96Q9Y6Y9 160 aa9.06□□□□□ -0.96
HDAC8-210ENST00000412342 IGLV2-18A0A075B6J9 118 aa9.05□□□□□ -0.96
HDAC8-210ENST00000412342 LINC00694P0DN24 101 aa9.05□□□□□ -0.96
HDAC8-210ENST00000412342 CEBPGP53567 150 aa9.05□□□□□ -0.96
HDAC8-210ENST00000412342 IFITM2Q01629 132 aa9.05□□□□□ -0.96
HDAC8-210ENST00000412342 LYPD5Q6UWN5 251 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms