RNA–Protein interactions for RNA: ENST00000409478.5

R3HDM1-202, Transcript of R3H domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene R3HDM1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-202ENST00000409478 TCF15Q12870 199 aa4.47□□□□□ -1.69
R3HDM1-202ENST00000409478 DEFB121Q5J5C9 76 aa4.47□□□□□ -1.69
R3HDM1-202ENST00000409478 C3orf22Q8N5N4 141 aa4.47□□□□□ -1.69
R3HDM1-202ENST00000409478 TMEM141Q96I45 108 aa4.47□□□□□ -1.69
R3HDM1-202ENST00000409478 VPS13AQ96RL7 3174 aa4.47□□□□□ -1.69
R3HDM1-202ENST00000409478 IGHV4-39P01824 125 aa4.47□□□□□ -1.69
R3HDM1-202ENST00000409478 ACYP1P07311 99 aa4.47□□□□□ -1.69
R3HDM1-202ENST00000409478 LINC00694P0DN24 101 aa4.47□□□□□ -1.69
R3HDM1-202ENST00000409478 PMVKQ15126 192 aa4.47□□□□□ -1.69
R3HDM1-202ENST00000409478 C9orf153Q5TBE3 101 aa4.47□□□□□ -1.69
R3HDM1-202ENST00000409478 UQCRQO14949 82 aa4.46□□□□□ -1.69
R3HDM1-202ENST00000409478 ATP5J2P56134 94 aa4.46□□□□□ -1.69
R3HDM1-202ENST00000409478 DPH3P1Q9H4G8 78 aa4.46□□□□□ -1.69
R3HDM1-202ENST00000409478 ZNF318Q5VUA4 2279 aa4.46□□□□□ -1.7
R3HDM1-202ENST00000409478 J3QQQ9 107 aa4.46□□□□□ -1.7
R3HDM1-202ENST00000409478 WIPF1O43516 503 aa4.46□□□□□ -1.7
R3HDM1-202ENST00000409478 CRYGDP07320 174 aa4.46□□□□□ -1.7
R3HDM1-202ENST00000409478 EBI3Q14213 229 aa4.46□□□□□ -1.7
R3HDM1-202ENST00000409478 IGFBPL1Q8WX77 278 aa4.46□□□□□ -1.7
R3HDM1-202ENST00000409478 SMAD5-AS1Q9Y6J3 95 aa4.46□□□□□ -1.7
R3HDM1-202ENST00000409478 SMIM9A6NGZ8 99 aa4.46□□□□□ -1.7
R3HDM1-202ENST00000409478 COX6CP09669 75 aa4.46□□□□□ -1.7
R3HDM1-202ENST00000409478 ZNF883P0CG24 379 aa4.46□□□□□ -1.7
R3HDM1-202ENST00000409478 EMP1P54849 157 aa4.46□□□□□ -1.7
R3HDM1-202ENST00000409478 SPG11Q96JI7 2443 aa4.46□□□□□ -1.7
R3HDM1-202ENST00000409478 LAMA1P25391 3075 aa4.46□□□□□ -1.7
R3HDM1-202ENST00000409478 ZFYVE26Q68DK2 2539 aa4.46□□□□□ -1.7
R3HDM1-202ENST00000409478 H7C2G1 150 aa4.46□□□□□ -1.7
R3HDM1-202ENST00000409478 NPFFO15130 113 aa4.46□□□□□ -1.7
R3HDM1-202ENST00000409478 C11orf21Q9P2W6 132 aa4.46□□□□□ -1.7
R3HDM1-202ENST00000409478 INTS1Q8N201 2190 aaKnown RBP4.45□□□□□ -1.7
R3HDM1-202ENST00000409478 FAM236AA0A1B0GUQ0 79 aa4.45□□□□□ -1.7
R3HDM1-202ENST00000409478 FAM236BA0A1B0GV22 79 aa4.45□□□□□ -1.7
R3HDM1-202ENST00000409478 BUB1B-PAK6H3BSN5 160 aa4.45□□□□□ -1.7
R3HDM1-202ENST00000409478 CD3EP07766 207 aa4.45□□□□□ -1.7
R3HDM1-202ENST00000409478 LOXP28300 417 aaPredicted RBP4.45□□□□□ -1.7
R3HDM1-202ENST00000409478 DLX1P56177 255 aa4.45□□□□□ -1.7
R3HDM1-202ENST00000409478 IGFL4Q6B9Z1 124 aa4.45□□□□□ -1.7
R3HDM1-202ENST00000409478 AMELXQ99217 191 aa4.45□□□□□ -1.7
R3HDM1-202ENST00000409478 LEPROTO15243 131 aa4.45□□□□□ -1.7
R3HDM1-202ENST00000409478 TSPEAR-AS2P59090 65 aa4.45□□□□□ -1.7
R3HDM1-202ENST00000409478 CCL8P80075 99 aa4.45□□□□□ -1.7
R3HDM1-202ENST00000409478 OR13C6PQ8NH95 151 aa4.45□□□□□ -1.7
R3HDM1-202ENST00000409478 MRPL53Q96EL3 112 aaKnown RBP4.45□□□□□ -1.7
R3HDM1-202ENST00000409478 LINC00526Q96FQ7 95 aa4.45□□□□□ -1.7
R3HDM1-202ENST00000409478 TIMM17AQ99595 171 aa4.45□□□□□ -1.7
R3HDM1-202ENST00000409478 IGLV11-55A0A075B6I3 123 aa4.45□□□□□ -1.7
R3HDM1-202ENST00000409478 TMEM178BH3BS89 294 aa4.45□□□□□ -1.7
R3HDM1-202ENST00000409478 H7C423 109 aa4.45□□□□□ -1.7
R3HDM1-202ENST00000409478 IGLV1-47P01700 117 aa4.45□□□□□ -1.7
R3HDM1-202ENST00000409478 RPS28P62857 69 aaKnown RBP4.45□□□□□ -1.7
R3HDM1-202ENST00000409478 A0A0J9YX75 114 aa4.44□□□□□ -1.7
R3HDM1-202ENST00000409478 PRAC2D3DTV9 90 aa4.44□□□□□ -1.7
R3HDM1-202ENST00000409478 TRIAP1O43715 76 aa4.44□□□□□ -1.7
R3HDM1-202ENST00000409478 MUSTN1Q8IVN3 82 aa4.44□□□□□ -1.7
R3HDM1-202ENST00000409478 POM121L12Q8N7R1 296 aa4.44□□□□□ -1.7
R3HDM1-202ENST00000409478 NUP37Q8NFH4 326 aa4.44□□□□□ -1.7
R3HDM1-202ENST00000409478 KAAG1Q9UBP8 84 aa4.44□□□□□ -1.7
R3HDM1-202ENST00000409478 ABCA4P78363 2273 aa4.44□□□□□ -1.7
R3HDM1-202ENST00000409478 TRGV11A0A075B6L2 103 aa4.44□□□□□ -1.7
R3HDM1-202ENST00000409478 SDHAF1A6NFY7 115 aa4.44□□□□□ -1.7
R3HDM1-202ENST00000409478 IGIPA6NJ69 53 aa4.44□□□□□ -1.7
R3HDM1-202ENST00000409478 C17orf100A8MU93 164 aa4.44□□□□□ -1.7
R3HDM1-202ENST00000409478 EIF4EBP3O60516 100 aaPredicted RBP4.44□□□□□ -1.7
R3HDM1-202ENST00000409478 HERVK_113P63121 156 aa4.44□□□□□ -1.7
R3HDM1-202ENST00000409478 RPL39LQ96EH5 51 aaKnown RBP4.44□□□□□ -1.7
R3HDM1-202ENST00000409478 CITED2Q99967 270 aaPredicted RBP4.44□□□□□ -1.7
R3HDM1-202ENST00000409478 AGPAT4-IT1Q9H0P7 198 aa4.44□□□□□ -1.7
R3HDM1-202ENST00000409478 TP53TG1Q9Y2A0 90 aa4.44□□□□□ -1.7
R3HDM1-202ENST00000409478 ZNF256Q9Y2P7 627 aaPredicted RBP4.44□□□□□ -1.7
R3HDM1-202ENST00000409478 PRRC2CQ9Y520 2896 aaKnown RBP4.44□□□□□ -1.7
R3HDM1-202ENST00000409478 RNF223E7ERA6 249 aa4.44□□□□□ -1.7
R3HDM1-202ENST00000409478 F8W735 103 aaPredicted RBP4.44□□□□□ -1.7
R3HDM1-202ENST00000409478 TSHBP01222 138 aa4.44□□□□□ -1.7
R3HDM1-202ENST00000409478 ELANEP08246 267 aa4.44□□□□□ -1.7
R3HDM1-202ENST00000409478 ZNF876PQ49A33 203 aa4.44□□□□□ -1.7
R3HDM1-202ENST00000409478 TMEM219Q86XT9 240 aa4.44□□□□□ -1.7
R3HDM1-202ENST00000409478 C3orf56Q8N813 242 aa4.44□□□□□ -1.7
R3HDM1-202ENST00000409478 PRSS33Q8NF86 280 aa4.44□□□□□ -1.7
R3HDM1-202ENST00000409478 METTL26Q96S19 204 aa4.44□□□□□ -1.7
R3HDM1-202ENST00000409478 S4R3C0 116 aa4.44□□□□□ -1.7
R3HDM1-202ENST00000409478 NBR2O15453 112 aa4.43□□□□□ -1.7
R3HDM1-202ENST00000409478 FANCD2OSQ96PS1 177 aa4.43□□□□□ -1.7
R3HDM1-202ENST00000409478 BEX4Q9NWD9 120 aaPredicted RBP4.43□□□□□ -1.7
R3HDM1-202ENST00000409478 ICOSQ9Y6W8 199 aa4.43□□□□□ -1.7
R3HDM1-202ENST00000409478 WDFY4Q6ZS81 3184 aa4.43□□□□□ -1.7
R3HDM1-202ENST00000409478 MED13LQ71F56 2210 aa4.43□□□□□ -1.7
R3HDM1-202ENST00000409478 TRAV25A0A0B4J276 109 aa4.43□□□□□ -1.7
R3HDM1-202ENST00000409478 MED14OSP0DP75 135 aa4.43□□□□□ -1.7
R3HDM1-202ENST00000409478 LYPD2Q6UXB3 125 aa4.43□□□□□ -1.7
R3HDM1-202ENST00000409478 C9orf47Q6ZRZ4 202 aa4.43□□□□□ -1.7
R3HDM1-202ENST00000409478 UBTD1Q9HAC8 227 aa4.43□□□□□ -1.7
R3HDM1-202ENST00000409478 LENEPQ9Y5L5 61 aa4.43□□□□□ -1.7
R3HDM1-202ENST00000409478 ANKRD11Q6UB99 2663 aaPredicted RBP4.43□□□□□ -1.7
R3HDM1-202ENST00000409478 TMEM223A0PJW6 202 aa4.43□□□□□ -1.7
R3HDM1-202ENST00000409478 OOSP1A8MZH6 123 aa4.43□□□□□ -1.7
R3HDM1-202ENST00000409478 MGPP08493 103 aa4.43□□□□□ -1.7
R3HDM1-202ENST00000409478 DEFB109BQ30KR1 87 aa4.43□□□□□ -1.7
R3HDM1-202ENST00000409478 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.43□□□□□ -1.7
R3HDM1-202ENST00000409478 FAM19A5Q7Z5A7 132 aaPredicted RBP4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms