RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 IZUMO1RA6ND01 250 aa2.78□□□□□ -1.96
HMGB3P18-201ENST00000406327 M0R1W7 72 aa2.78□□□□□ -1.96
HMGB3P18-201ENST00000406327 LY6HO94772 140 aa2.78□□□□□ -1.96
HMGB3P18-201ENST00000406327 BRI3O95415 125 aa2.78□□□□□ -1.96
HMGB3P18-201ENST00000406327 REG1AP05451 166 aa2.78□□□□□ -1.96
HMGB3P18-201ENST00000406327 OR10J4P0C629 311 aa2.78□□□□□ -1.96
HMGB3P18-201ENST00000406327 CNTFRP26992 372 aa2.78□□□□□ -1.96
HMGB3P18-201ENST00000406327 CRYBB3P26998 211 aa2.78□□□□□ -1.96
HMGB3P18-201ENST00000406327 S100A2P29034 98 aa2.78□□□□□ -1.96
HMGB3P18-201ENST00000406327 RPL27AP46776 148 aaKnown RBP2.78□□□□□ -1.96
HMGB3P18-201ENST00000406327 ARF6P62330 175 aa2.78□□□□□ -1.96
HMGB3P18-201ENST00000406327 S100A12P80511 92 aa2.78□□□□□ -1.96
HMGB3P18-201ENST00000406327 ZNF90Q03938 601 aa2.78□□□□□ -1.96
HMGB3P18-201ENST00000406327 PRB3Q04118 309 aaPredicted RBP2.78□□□□□ -1.96
HMGB3P18-201ENST00000406327 COTL1Q14019 142 aa2.78□□□□□ -1.96
HMGB3P18-201ENST00000406327 CLEC12BQ2HXU8 276 aa2.78□□□□□ -1.96
HMGB3P18-201ENST00000406327 DNLZQ5SXM8 178 aa2.78□□□□□ -1.96
HMGB3P18-201ENST00000406327 C10orf113Q5VZT2 155 aa2.78□□□□□ -1.96
HMGB3P18-201ENST00000406327 HCP5Q6MZN7 132 aa2.78□□□□□ -1.96
HMGB3P18-201ENST00000406327 SLC25A34Q6PIV7 304 aa2.78□□□□□ -1.96
HMGB3P18-201ENST00000406327 HIST3H2BBQ8N257 126 aa2.78□□□□□ -1.96
HMGB3P18-201ENST00000406327 OR1P1Q8NH06 330 aa2.78□□□□□ -1.96
HMGB3P18-201ENST00000406327 SGMS2Q8NHU3 365 aa2.78□□□□□ -1.96
HMGB3P18-201ENST00000406327 PFDN5Q99471 154 aa2.78□□□□□ -1.96
HMGB3P18-201ENST00000406327 TRGV9Q99603 122 aa2.78□□□□□ -1.96
HMGB3P18-201ENST00000406327 FBXL15Q9H469 300 aa2.78□□□□□ -1.96
HMGB3P18-201ENST00000406327 NIT2Q9NQR4 276 aa2.78□□□□□ -1.96
HMGB3P18-201ENST00000406327 MRPL36Q9P0J6 103 aaKnown RBP2.78□□□□□ -1.96
HMGB3P18-201ENST00000406327 EP300Q09472 2414 aaPredicted RBP2.78□□□□□ -1.97
HMGB3P18-201ENST00000406327 ZFHX2Q9C0A1 2572 aaPredicted RBP2.77□□□□□ -1.97
HMGB3P18-201ENST00000406327 TTC28Q96AY4 2481 aa2.77□□□□□ -1.97
HMGB3P18-201ENST00000406327 TRAV9-1A0A075B6T8 112 aa2.77□□□□□ -1.97
HMGB3P18-201ENST00000406327 IGHV3OR16-8A0A075B7F1 116 aa2.77□□□□□ -1.97
HMGB3P18-201ENST00000406327 ODF3BA8MYP8 253 aa2.77□□□□□ -1.97
HMGB3P18-201ENST00000406327 GGTLC3B5MD39 225 aa2.77□□□□□ -1.97
HMGB3P18-201ENST00000406327 CORTO00230 105 aa2.77□□□□□ -1.97
HMGB3P18-201ENST00000406327 TCF21O43680 179 aa2.77□□□□□ -1.97
HMGB3P18-201ENST00000406327 HYPMO75409 117 aa2.77□□□□□ -1.97
HMGB3P18-201ENST00000406327 GNG4P50150 75 aa2.77□□□□□ -1.97
HMGB3P18-201ENST00000406327 YPEL3P61236 119 aaPredicted RBP2.77□□□□□ -1.97
HMGB3P18-201ENST00000406327 LDLRAD2Q5SZI1 272 aa2.77□□□□□ -1.97
HMGB3P18-201ENST00000406327 LINC00305Q7Z4B0 112 aa2.77□□□□□ -1.97
HMGB3P18-201ENST00000406327 DAZ4Q86SG3 579 aaKnown RBP2.77□□□□□ -1.97
HMGB3P18-201ENST00000406327 OR10D4PQ8NGN7 298 aa2.77□□□□□ -1.97
HMGB3P18-201ENST00000406327 FXYD5Q96DB9 178 aa2.77□□□□□ -1.97
HMGB3P18-201ENST00000406327 DAZ1Q9NQZ3 744 aaKnown RBP2.77□□□□□ -1.97
HMGB3P18-201ENST00000406327 SPANXB1Q9NS25 103 aaPredicted RBP2.77□□□□□ -1.97
HMGB3P18-201ENST00000406327 IL36BQ9NZH7 164 aa2.77□□□□□ -1.97
HMGB3P18-201ENST00000406327 TRAPPC1Q9Y5R8 145 aa2.77□□□□□ -1.97
HMGB3P18-201ENST00000406327 CELSR3Q9NYQ7 3312 aa2.77□□□□□ -1.97
HMGB3P18-201ENST00000406327 DMXL1Q9Y485 3027 aa2.76□□□□□ -1.97
HMGB3P18-201ENST00000406327 ZNF292O60281 2723 aa2.76□□□□□ -1.97
HMGB3P18-201ENST00000406327 OOSP1A8MZH6 123 aa2.76□□□□□ -1.97
HMGB3P18-201ENST00000406327 I3L2K1 104 aa2.76□□□□□ -1.97
HMGB3P18-201ENST00000406327 K7ERS5 55 aa2.76□□□□□ -1.97
HMGB3P18-201ENST00000406327 SLC17A3O00476 420 aa2.76□□□□□ -1.97
HMGB3P18-201ENST00000406327 ISLRO14498 428 aa2.76□□□□□ -1.97
HMGB3P18-201ENST00000406327 NDUFA3O95167 84 aa2.76□□□□□ -1.97
HMGB3P18-201ENST00000406327 CNIH1O95406 144 aa2.76□□□□□ -1.97
HMGB3P18-201ENST00000406327 ORM1P02763 201 aa2.76□□□□□ -1.97
HMGB3P18-201ENST00000406327 FABP1P07148 127 aa2.76□□□□□ -1.97
HMGB3P18-201ENST00000406327 NBEAP1P0C6P0 100 aa2.76□□□□□ -1.97
HMGB3P18-201ENST00000406327 APELAP0DMC3 54 aa2.76□□□□□ -1.97
HMGB3P18-201ENST00000406327 PYYP10082 97 aa2.76□□□□□ -1.97
HMGB3P18-201ENST00000406327 FABP4P15090 132 aa2.76□□□□□ -1.97
HMGB3P18-201ENST00000406327 ORM2P19652 201 aa2.76□□□□□ -1.97
HMGB3P18-201ENST00000406327 UBE2L3P68036 154 aaKnown RBP2.76□□□□□ -1.97
HMGB3P18-201ENST00000406327 FXYD3Q14802 87 aa2.76□□□□□ -1.97
HMGB3P18-201ENST00000406327 PLGLAQ15195 96 aa2.76□□□□□ -1.97
HMGB3P18-201ENST00000406327 MMDQ15546 238 aa2.76□□□□□ -1.97
HMGB3P18-201ENST00000406327 PDZD11Q5EBL8 140 aa2.76□□□□□ -1.97
HMGB3P18-201ENST00000406327 CENPWQ5EE01 88 aa2.76□□□□□ -1.97
HMGB3P18-201ENST00000406327 PYY3Q5JQD4 70 aa2.76□□□□□ -1.97
HMGB3P18-201ENST00000406327 LCE3EQ5T5B0 92 aa2.76□□□□□ -1.97
HMGB3P18-201ENST00000406327 MINOS1Q5TGZ0 78 aa2.76□□□□□ -1.97
HMGB3P18-201ENST00000406327 BOD1L2Q8IYS8 172 aa2.76□□□□□ -1.97
HMGB3P18-201ENST00000406327 RNF182Q8N6D2 247 aa2.76□□□□□ -1.97
HMGB3P18-201ENST00000406327 ITLN2Q8WWU7 325 aaPredicted RBP2.76□□□□□ -1.97
HMGB3P18-201ENST00000406327 IGF2BP2-AS1Q96M15 143 aa2.76□□□□□ -1.97
HMGB3P18-201ENST00000406327 HIST1H2BLQ99880 126 aa2.76□□□□□ -1.97
HMGB3P18-201ENST00000406327 OSTCQ9NRP0 149 aa2.76□□□□□ -1.97
HMGB3P18-201ENST00000406327 RBM12B-AS1Q9P1G2 102 aa2.76□□□□□ -1.97
HMGB3P18-201ENST00000406327 EPDR1Q9UM22 224 aa2.76□□□□□ -1.97
HMGB3P18-201ENST00000406327 HILPDAQ9Y5L2 63 aa2.76□□□□□ -1.97
HMGB3P18-201ENST00000406327 MINOS1-NBL1R4GNA1 71 aa2.76□□□□□ -1.97
HMGB3P18-201ENST00000406327 V9GYV3 84 aa2.76□□□□□ -1.97
HMGB3P18-201ENST00000406327 CACNA1GO43497 2377 aa2.76□□□□□ -1.97
HMGB3P18-201ENST00000406327 LOC400499M0QZD8 3231 aa2.76□□□□□ -1.97
HMGB3P18-201ENST00000406327 CFAP47Q6ZTR5 3102 aa2.75□□□□□ -1.97
HMGB3P18-201ENST00000406327 IGHV3-21A0A0B4J1V1 117 aa2.75□□□□□ -1.97
HMGB3P18-201ENST00000406327 SMIM27A0A1W2PRY6 76 aa2.75□□□□□ -1.97
HMGB3P18-201ENST00000406327 K7EIM0 57 aa2.75□□□□□ -1.97
HMGB3P18-201ENST00000406327 IGKV1-17P01599 117 aa2.75□□□□□ -1.97
HMGB3P18-201ENST00000406327 IGLC1P0CG04 106 aa2.75□□□□□ -1.97
HMGB3P18-201ENST00000406327 RD3LP0DJH9 198 aa2.75□□□□□ -1.97
HMGB3P18-201ENST00000406327 HIST1H1BP16401 226 aaKnown RBP2.75□□□□□ -1.97
HMGB3P18-201ENST00000406327 CD24P25063 80 aa2.75□□□□□ -1.97
HMGB3P18-201ENST00000406327 EFNA4P52798 201 aa2.75□□□□□ -1.97
HMGB3P18-201ENST00000406327 RANP62826 216 aaKnown RBP2.75□□□□□ -1.97
HMGB3P18-201ENST00000406327 RPL19P84098 196 aaKnown RBP2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms