RNA–Protein interactions for RNA: ENST00000391945.8

ERCC2-204, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC2, Length 4,153 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-204ENST00000391945 ZNF80P51504 273 aaPredicted RBP9.79□□□□□ -0.84
ERCC2-204ENST00000391945 SRSF2Q01130 221 aaKnown RBP9.79□□□□□ -0.84
ERCC2-204ENST00000391945 KIR2DL5AQ8N109 375 aa9.79□□□□□ -0.84
ERCC2-204ENST00000391945 PIFOQ8TCI5 191 aa9.79□□□□□ -0.84
ERCC2-204ENST00000391945 SMAD5-AS1Q9Y6J3 95 aa9.79□□□□□ -0.84
ERCC2-204ENST00000391945 Q6ZVH6 145 aa9.78□□□□□ -0.84
ERCC2-204ENST00000391945 GTSCR1Q86UQ5 136 aa9.78□□□□□ -0.84
ERCC2-204ENST00000391945 GPHB5Q86YW7 130 aa9.78□□□□□ -0.84
ERCC2-204ENST00000391945 IGKV3OR2-268A0A0C4DH90 116 aa9.78□□□□□ -0.84
ERCC2-204ENST00000391945 H7C1H1 209 aa9.78□□□□□ -0.84
ERCC2-204ENST00000391945 PPP1R17O96001 155 aa9.78□□□□□ -0.84
ERCC2-204ENST00000391945 C19orf71A6NCJ1 209 aa9.78□□□□□ -0.84
ERCC2-204ENST00000391945 SRSF1Q07955 248 aaKnown RBP eCLIP9.78□□□□□ -0.842e-6■■■■□ 19.8
ERCC2-204ENST00000391945 OR9G4Q8NGQ1 327 aa9.78□□□□□ -0.84
ERCC2-204ENST00000391945 OR11H2Q8NH07 326 aa9.78□□□□□ -0.84
ERCC2-204ENST00000391945 MLST8Q9BVC4 326 aa9.78□□□□□ -0.84
ERCC2-204ENST00000391945 OR2K2Q8NGT1 345 aa9.78□□□□□ -0.84
ERCC2-204ENST00000391945 ITPR3Q14573 2671 aa9.77□□□□□ -0.84
ERCC2-204ENST00000391945 TRGV1A0A0A0MS02 117 aa9.77□□□□□ -0.85
ERCC2-204ENST00000391945 HERVK_113P61574 105 aa9.77□□□□□ -0.85
ERCC2-204ENST00000391945 CITED2Q99967 270 aaPredicted RBP9.77□□□□□ -0.85
ERCC2-204ENST00000391945 A0A1B0GV72 72 aa9.77□□□□□ -0.85
ERCC2-204ENST00000391945 MYCNOSP40205 109 aa9.77□□□□□ -0.85
ERCC2-204ENST00000391945 Q1RN00 199 aa9.77□□□□□ -0.85
ERCC2-204ENST00000391945 TMEM170BQ5T4T1 132 aa9.77□□□□□ -0.85
ERCC2-204ENST00000391945 J3QR89 54 aa9.77□□□□□ -0.85
ERCC2-204ENST00000391945 SCGB1C2P0DMR2 95 aa9.77□□□□□ -0.85
ERCC2-204ENST00000391945 MBD6Q96DN6 1003 aa9.77□□□□□ -0.85
ERCC2-204ENST00000391945 F8W735 103 aaPredicted RBP9.76□□□□□ -0.85
ERCC2-204ENST00000391945 AMMECR1LQ6DCA0 310 aa9.76□□□□□ -0.85
ERCC2-204ENST00000391945 MRPL53Q96EL3 112 aaKnown RBP9.76□□□□□ -0.85
ERCC2-204ENST00000391945 RBAKDNA6NC62 111 aa9.76□□□□□ -0.85
ERCC2-204ENST00000391945 KLF5Q13887 457 aaPredicted RBP9.76□□□□□ -0.85
ERCC2-204ENST00000391945 LRBAP50851 2863 aa9.76□□□□□ -0.85
ERCC2-204ENST00000391945 IGHV1OR15-1A0A075B7D0 117 aa9.76□□□□□ -0.85
ERCC2-204ENST00000391945 HTN3P15516 51 aa9.76□□□□□ -0.85
ERCC2-204ENST00000391945 TMEM61Q8N0U2 210 aa9.76□□□□□ -0.85
ERCC2-204ENST00000391945 SMR3AQ99954 134 aa9.76□□□□□ -0.85
ERCC2-204ENST00000391945 TSSC4Q9Y5U2 329 aaPredicted RBP9.76□□□□□ -0.85
ERCC2-204ENST00000391945 CHD6Q8TD26 2715 aa9.76□□□□□ -0.85
ERCC2-204ENST00000391945 INSP01308 110 aa9.75□□□□□ -0.85
ERCC2-204ENST00000391945 NEGR1Q7Z3B1 354 aa9.75□□□□□ -0.85
ERCC2-204ENST00000391945 CSTL1Q9H114 145 aa9.75□□□□□ -0.85
ERCC2-204ENST00000391945 H3BUT2 72 aa9.75□□□□□ -0.85
ERCC2-204ENST00000391945 K7EMT4 169 aa9.75□□□□□ -0.85
ERCC2-204ENST00000391945 ZC2HC1BQ5TFG8 222 aa9.75□□□□□ -0.85
ERCC2-204ENST00000391945 DLX4Q92988 240 aaPredicted RBP9.75□□□□□ -0.85
ERCC2-204ENST00000391945 ATP6V0BQ99437 205 aa9.75□□□□□ -0.85
ERCC2-204ENST00000391945 DPM2O94777 84 aa9.75□□□□□ -0.85
ERCC2-204ENST00000391945 LAGE3Q14657 143 aa9.75□□□□□ -0.85
ERCC2-204ENST00000391945 Q6ZSV7 163 aa9.74□□□□□ -0.85
ERCC2-204ENST00000391945 IGKCP01834 107 aa9.74□□□□□ -0.85
ERCC2-204ENST00000391945 IGHV3-16A0A0C4DH30 117 aa9.74□□□□□ -0.85
ERCC2-204ENST00000391945 C18orf65Q6ZTR6 163 aa9.74□□□□□ -0.85
ERCC2-204ENST00000391945 F8P00451 2351 aa9.74□□□□□ -0.85
ERCC2-204ENST00000391945 A0A1B0GXF2 115 aa9.74□□□□□ -0.85
ERCC2-204ENST00000391945 NPSP0C0P6 89 aa9.74□□□□□ -0.85
ERCC2-204ENST00000391945 CD28P10747 220 aa9.74□□□□□ -0.85
ERCC2-204ENST00000391945 CRIP1P50238 77 aa9.74□□□□□ -0.85
ERCC2-204ENST00000391945 ZNF415Q09FC8 603 aa9.74□□□□□ -0.85
ERCC2-204ENST00000391945 DCHS1Q96JQ0 3298 aa9.73□□□□□ -0.85
ERCC2-204ENST00000391945 ESDP10768 282 aa9.73□□□□□ -0.85
ERCC2-204ENST00000391945 PSMB8P28062 276 aa9.73□□□□□ -0.85
ERCC2-204ENST00000391945 CD300EQ496F6 205 aaPredicted RBP9.73□□□□□ -0.85
ERCC2-204ENST00000391945 SFTA2Q6UW10 78 aa9.73□□□□□ -0.85
ERCC2-204ENST00000391945 C9orf47Q6ZRZ4 202 aa9.73□□□□□ -0.85
ERCC2-204ENST00000391945 C20orf173Q96LM9 149 aa9.73□□□□□ -0.85
ERCC2-204ENST00000391945 ZNF747Q9BV97 191 aa9.73□□□□□ -0.85
ERCC2-204ENST00000391945 CYSLTR1Q9Y271 337 aa9.73□□□□□ -0.85
ERCC2-204ENST00000391945 H7C2G1 150 aa9.73□□□□□ -0.85
ERCC2-204ENST00000391945 FABP2P12104 132 aa9.73□□□□□ -0.85
ERCC2-204ENST00000391945 KIR3DS1Q14943 382 aa9.73□□□□□ -0.85
ERCC2-204ENST00000391945 ORMDL2Q53FV1 153 aa9.73□□□□□ -0.85
ERCC2-204ENST00000391945 LENEPQ9Y5L5 61 aa9.73□□□□□ -0.85
ERCC2-204ENST00000391945 EDN2P20800 178 aa9.73□□□□□ -0.85
ERCC2-204ENST00000391945 LINC00310P59036 64 aa9.73□□□□□ -0.85
ERCC2-204ENST00000391945 ZNF702PQ9H963 129 aa9.73□□□□□ -0.85
ERCC2-204ENST00000391945 NHP2Q9NX24 153 aaKnown RBP9.73□□□□□ -0.85
ERCC2-204ENST00000391945 LOC107984156A0A0G2JMH3 177 aa9.72□□□□□ -0.85
ERCC2-204ENST00000391945 UBE2L6O14933 153 aa9.72□□□□□ -0.85
ERCC2-204ENST00000391945 IGLV2-11P01706 119 aa9.72□□□□□ -0.85
ERCC2-204ENST00000391945 CFHR3Q02985 330 aa9.72□□□□□ -0.85
ERCC2-204ENST00000391945 ARL17AQ8IVW1 177 aa9.72□□□□□ -0.85
ERCC2-204ENST00000391945 TP73-AS1Q9UF72 201 aa9.72□□□□□ -0.85
ERCC2-204ENST00000391945 CLPSL1A2RUU4 121 aa9.72□□□□□ -0.85
ERCC2-204ENST00000391945 FOXI2Q6ZQN5 318 aa9.72□□□□□ -0.85
ERCC2-204ENST00000391945 INAFM1C9JVW0 142 aa9.72□□□□□ -0.85
ERCC2-204ENST00000391945 MRPS16Q9Y3D3 137 aaKnown RBP9.72□□□□□ -0.85
ERCC2-204ENST00000391945 TRGV4A0A0C4DH28 118 aa9.71□□□□□ -0.85
ERCC2-204ENST00000391945 PHLDA1Q8WV24 401 aaPredicted RBP9.71□□□□□ -0.85
ERCC2-204ENST00000391945 DKK2Q9UBU2 259 aa9.71□□□□□ -0.85
ERCC2-204ENST00000391945 TMEM89A2RUT3 159 aa9.71□□□□□ -0.85
ERCC2-204ENST00000391945 PRSS2P07478 247 aa9.71□□□□□ -0.85
ERCC2-204ENST00000391945 SUMO2P61956 95 aaKnown RBP9.71□□□□□ -0.86
ERCC2-204ENST00000391945 ORAOV1Q8WV07 137 aa9.71□□□□□ -0.86
ERCC2-204ENST00000391945 LINC01559Q495D7 138 aa9.71□□□□□ -0.86
ERCC2-204ENST00000391945 C3orf56Q8N813 242 aa9.71□□□□□ -0.86
ERCC2-204ENST00000391945 TRAV8-2A0A0B4J237 113 aa9.7□□□□□ -0.86
ERCC2-204ENST00000391945 IGKV3D-20A0A0C4DH25 116 aa9.7□□□□□ -0.86
ERCC2-204ENST00000391945 IGLV1-40P01703 118 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms