RNA–Protein interactions for RNA: ENST00000389195.6

LTN1-203, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 2,714 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-203ENST00000389195 MGPP08493 103 aa7.52□□□□□ -1.21
LTN1-203ENST00000389195 RPL39LQ96EH5 51 aaKnown RBP7.52□□□□□ -1.21
LTN1-203ENST00000389195 MRPL53Q96EL3 112 aaKnown RBP7.52□□□□□ -1.21
LTN1-203ENST00000389195 FAM19A4Q96LR4 140 aa7.52□□□□□ -1.21
LTN1-203ENST00000389195 PHLDA3Q9Y5J5 127 aa7.52□□□□□ -1.21
LTN1-203ENST00000389195 COL6A5A8TX70 2615 aa7.52□□□□□ -1.21
LTN1-203ENST00000389195 TRAV21A0A0B4J279 112 aa7.52□□□□□ -1.21
LTN1-203ENST00000389195 TCAPO15273 167 aa7.52□□□□□ -1.21
LTN1-203ENST00000389195 REC114Q7Z4M0 266 aa7.52□□□□□ -1.21
LTN1-203ENST00000389195 ORMDL3Q8N138 153 aa7.52□□□□□ -1.21
LTN1-203ENST00000389195 Q8N1Y9 231 aa7.52□□□□□ -1.21
LTN1-203ENST00000389195 A0A096LNJ9 63 aa7.51□□□□□ -1.21
LTN1-203ENST00000389195 TMEM89A2RUT3 159 aa7.51□□□□□ -1.21
LTN1-203ENST00000389195 LGALS9O00182 355 aa7.51□□□□□ -1.21
LTN1-203ENST00000389195 S100A12P80511 92 aa7.51□□□□□ -1.21
LTN1-203ENST00000389195 DEFB114Q30KQ6 69 aa7.51□□□□□ -1.21
LTN1-203ENST00000389195 FAM159AQ6UWV7 190 aa7.51□□□□□ -1.21
LTN1-203ENST00000389195 ZNF493Q6ZR52 646 aa7.51□□□□□ -1.21
LTN1-203ENST00000389195 ARL6IP6Q8N6S5 226 aa7.51□□□□□ -1.21
LTN1-203ENST00000389195 ZNF418Q8TF45 676 aaPredicted RBP7.51□□□□□ -1.21
LTN1-203ENST00000389195 OR4C46A6NHA9 309 aa7.5□□□□□ -1.21
LTN1-203ENST00000389195 KLLNB2CW77 178 aa7.5□□□□□ -1.21
LTN1-203ENST00000389195 SAP30O75446 220 aa7.5□□□□□ -1.21
LTN1-203ENST00000389195 LEPROTL1O95214 131 aa7.5□□□□□ -1.21
LTN1-203ENST00000389195 RNASE1P07998 156 aaKnown RBP7.5□□□□□ -1.21
LTN1-203ENST00000389195 HILS1P60008 231 aa7.5□□□□□ -1.21
LTN1-203ENST00000389195 Q6AWC8 147 aa7.5□□□□□ -1.21
LTN1-203ENST00000389195 AP5S1Q9NUS5 200 aa7.5□□□□□ -1.21
LTN1-203ENST00000389195 XCL2Q9UBD3 114 aa7.5□□□□□ -1.21
LTN1-203ENST00000389195 Q9UF83 564 aa7.5□□□□□ -1.21
LTN1-203ENST00000389195 FBLL1A6NHQ2 334 aaKnown RBP7.5□□□□□ -1.21
LTN1-203ENST00000389195 TNFRSF6BO95407 300 aa7.5□□□□□ -1.21
LTN1-203ENST00000389195 FA2HQ7L5A8 372 aa7.5□□□□□ -1.21
LTN1-203ENST00000389195 C14orf144Q96I85 54 aa7.5□□□□□ -1.21
LTN1-203ENST00000389195 TMEM191AQ9H0A3 160 aa7.5□□□□□ -1.21
LTN1-203ENST00000389195 ANK2Q01484 3957 aa7.5□□□□□ -1.21
LTN1-203ENST00000389195 hDV102S1A0JD36 115 aa7.5□□□□□ -1.21
LTN1-203ENST00000389195 ASIPP42127 132 aa7.5□□□□□ -1.21
LTN1-203ENST00000389195 PROK1P58294 105 aa7.5□□□□□ -1.21
LTN1-203ENST00000389195 RPS20P60866 119 aaKnown RBP7.5□□□□□ -1.21
LTN1-203ENST00000389195 NOTCH1P46531 2555 aa7.49□□□□□ -1.21
LTN1-203ENST00000389195 CDKN1BP46527 198 aa7.49□□□□□ -1.21
LTN1-203ENST00000389195 AMTNQ6UX39 209 aa7.49□□□□□ -1.21
LTN1-203ENST00000389195 MAP6D1Q9H9H5 199 aa7.49□□□□□ -1.21
LTN1-203ENST00000389195 ZNF256Q9Y2P7 627 aaPredicted RBP7.49□□□□□ -1.21
LTN1-203ENST00000389195 C7orf71A4D174 169 aa7.49□□□□□ -1.21
LTN1-203ENST00000389195 ADARB2-AS1A8MUL3 147 aa7.49□□□□□ -1.21
LTN1-203ENST00000389195 CRXO43186 299 aaPredicted RBP7.49□□□□□ -1.21
LTN1-203ENST00000389195 DDTP30046 118 aa7.49□□□□□ -1.21
LTN1-203ENST00000389195 TMEM86BQ8N661 226 aa7.49□□□□□ -1.21
LTN1-203ENST00000389195 SNAI2O43623 268 aa7.48□□□□□ -1.21
LTN1-203ENST00000389195 ODF3L2Q3SX64 289 aa7.48□□□□□ -1.21
LTN1-203ENST00000389195 CNFNQ9BYD5 112 aa7.48□□□□□ -1.21
LTN1-203ENST00000389195 PEMTQ9UBM1 199 aa7.48□□□□□ -1.21
LTN1-203ENST00000389195 F5H697 171 aa7.48□□□□□ -1.21
LTN1-203ENST00000389195 H3BMM0 161 aa7.48□□□□□ -1.21
LTN1-203ENST00000389195 PKIAP61925 76 aa7.48□□□□□ -1.21
LTN1-203ENST00000389195 CBY3A6NI87 242 aa7.47□□□□□ -1.21
LTN1-203ENST00000389195 TSTD3H0UI37 97 aa7.47□□□□□ -1.21
LTN1-203ENST00000389195 TCF21O43680 179 aa7.47□□□□□ -1.21
LTN1-203ENST00000389195 OR5AL1P0C617 328 aa7.47□□□□□ -1.21
LTN1-203ENST00000389195 BTF3P20290 206 aaKnown RBP7.47□□□□□ -1.21
LTN1-203ENST00000389195 VAMP8Q9BV40 100 aa7.47□□□□□ -1.21
LTN1-203ENST00000389195 P0DMU3 169 aa7.47□□□□□ -1.21
LTN1-203ENST00000389195 FAM231AP0DMU4 169 aa7.47□□□□□ -1.21
LTN1-203ENST00000389195 FAM231CP0DMU5 169 aa7.47□□□□□ -1.21
LTN1-203ENST00000389195 RPL35AP18077 110 aaKnown RBP7.47□□□□□ -1.21
LTN1-203ENST00000389195 LEPP41159 167 aa7.47□□□□□ -1.21
LTN1-203ENST00000389195 ZNF705AQ6ZN79 300 aaPredicted RBP7.47□□□□□ -1.21
LTN1-203ENST00000389195 GATD1Q8NB37 220 aa7.47□□□□□ -1.21
LTN1-203ENST00000389195 TSSC4Q9Y5U2 329 aaPredicted RBP7.47□□□□□ -1.21
LTN1-203ENST00000389195 U3KQK5 164 aa7.47□□□□□ -1.21
LTN1-203ENST00000389195 SYS1-DBNDD2H3BUS1 97 aa7.46□□□□□ -1.21
LTN1-203ENST00000389195 AZU1P20160 251 aa7.46□□□□□ -1.21
LTN1-203ENST00000389195 SPATA45Q537H7 98 aa7.46□□□□□ -1.21
LTN1-203ENST00000389195 NRACQ8N912 160 aa7.46□□□□□ -1.21
LTN1-203ENST00000389195 OR2K2Q8NGT1 345 aa7.46□□□□□ -1.21
LTN1-203ENST00000389195 TMEM70Q9BUB7 260 aa7.46□□□□□ -1.22
LTN1-203ENST00000389195 LENEPQ9Y5L5 61 aa7.46□□□□□ -1.22
LTN1-203ENST00000389195 FHL3Q13643 280 aa7.45□□□□□ -1.22
LTN1-203ENST00000389195 TEX43Q6ZNM6 134 aa7.45□□□□□ -1.22
LTN1-203ENST00000389195 RASL10AQ92737 203 aa7.45□□□□□ -1.22
LTN1-203ENST00000389195 IGHV3-16A0A0C4DH30 117 aa7.45□□□□□ -1.22
LTN1-203ENST00000389195 A0A1B0GW15 77 aa7.45□□□□□ -1.22
LTN1-203ENST00000389195 IGLL1P15814 213 aa7.45□□□□□ -1.22
LTN1-203ENST00000389195 BATFQ16520 125 aa7.45□□□□□ -1.22
LTN1-203ENST00000389195 ZC2HC1BQ5TFG8 222 aa7.45□□□□□ -1.22
LTN1-203ENST00000389195 FOXI2Q6ZQN5 318 aa7.45□□□□□ -1.22
LTN1-203ENST00000389195 CHCHD1Q96BP2 118 aaKnown RBP7.45□□□□□ -1.22
LTN1-203ENST00000389195 ZNF747Q9BV97 191 aa7.45□□□□□ -1.22
LTN1-203ENST00000389195 DEFA6Q01524 100 aa7.44□□□□□ -1.22
LTN1-203ENST00000389195 ZNF876PQ49A33 203 aa7.44□□□□□ -1.22
LTN1-203ENST00000389195 STPG4Q8N801 248 aa7.44□□□□□ -1.22
LTN1-203ENST00000389195 TMEM158Q8WZ71 300 aa7.44□□□□□ -1.22
LTN1-203ENST00000389195 IGHV1OR15-1A0A075B7D0 117 aa7.44□□□□□ -1.22
LTN1-203ENST00000389195 SMIM15Q7Z3B0 74 aa7.44□□□□□ -1.22
LTN1-203ENST00000389195 LINC01587Q99440 93 aa7.44□□□□□ -1.22
LTN1-203ENST00000389195 MAP1LC3AQ9H492 121 aa7.44□□□□□ -1.22
LTN1-203ENST00000389195 DKK2Q9UBU2 259 aa7.44□□□□□ -1.22
LTN1-203ENST00000389195 EREGO14944 169 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms