RNA–Protein interactions for RNA: ENST00000378037.9

CKAP2-203, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-203ENST00000378037 IGHG2P01859 326 aa6.17□□□□□ -1.42
CKAP2-203ENST00000378037 JOSD1Q15040 202 aaPredicted RBP6.17□□□□□ -1.42
CKAP2-203ENST00000378037 PRR9Q5T870 116 aa6.17□□□□□ -1.42
CKAP2-203ENST00000378037 ZNF625Q96I27 306 aaPredicted RBP6.17□□□□□ -1.42
CKAP2-203ENST00000378037 ALKBH7Q9BT30 221 aaPredicted RBP6.17□□□□□ -1.42
CKAP2-203ENST00000378037 TMEM262E9PQX1 116 aa6.16□□□□□ -1.42
CKAP2-203ENST00000378037 FNDC10F2Z333 226 aa6.16□□□□□ -1.42
CKAP2-203ENST00000378037 EREGO14944 169 aa6.16□□□□□ -1.42
CKAP2-203ENST00000378037 USMG5Q96IX5 58 aa6.16□□□□□ -1.42
CKAP2-203ENST00000378037 POLR3KQ9Y2Y1 108 aaPredicted RBP6.16□□□□□ -1.42
CKAP2-203ENST00000378037 FAM223BA6NKX1 122 aa6.16□□□□□ -1.42
CKAP2-203ENST00000378037 PLA2G2AP14555 144 aa6.16□□□□□ -1.42
CKAP2-203ENST00000378037 FAM223AQ8IWN6 122 aa6.16□□□□□ -1.42
CKAP2-203ENST00000378037 SCGB3A1Q96QR1 104 aa6.16□□□□□ -1.42
CKAP2-203ENST00000378037 A6NJY4 79 aa6.16□□□□□ -1.42
CKAP2-203ENST00000378037 CCL24O00175 119 aa6.16□□□□□ -1.42
CKAP2-203ENST00000378037 NPSP0C0P6 89 aa6.16□□□□□ -1.42
CKAP2-203ENST00000378037 CLPSL2Q6UWE3 100 aa6.16□□□□□ -1.42
CKAP2-203ENST00000378037 C9orf139Q6ZV77 190 aa6.16□□□□□ -1.42
CKAP2-203ENST00000378037 TOMM7Q9P0U1 55 aa6.16□□□□□ -1.42
CKAP2-203ENST00000378037 C11orf21Q9P2W6 132 aa6.16□□□□□ -1.42
CKAP2-203ENST00000378037 SMIM27A0A1W2PRY6 76 aa6.15□□□□□ -1.42
CKAP2-203ENST00000378037 ADARB2-AS1A8MUL3 147 aa6.15□□□□□ -1.42
CKAP2-203ENST00000378037 A8MWP6 167 aa6.15□□□□□ -1.42
CKAP2-203ENST00000378037 DEFB121Q5J5C9 76 aa6.15□□□□□ -1.42
CKAP2-203ENST00000378037 OR10J3Q5JRS4 329 aa6.15□□□□□ -1.42
CKAP2-203ENST00000378037 MTURNQ8N3F0 131 aa6.15□□□□□ -1.42
CKAP2-203ENST00000378037 LINC00482Q8N8I6 264 aa6.15□□□□□ -1.42
CKAP2-203ENST00000378037 OR2K2Q8NGT1 345 aa6.15□□□□□ -1.42
CKAP2-203ENST00000378037 IGHV1-24A0A0C4DH33 117 aa6.15□□□□□ -1.43
CKAP2-203ENST00000378037 WI2-2373I1.2A0A1W2PRP0 233 aa6.15□□□□□ -1.43
CKAP2-203ENST00000378037 GAGE12BA1L429 117 aa6.15□□□□□ -1.43
CKAP2-203ENST00000378037 GAGE7O76087 117 aa6.15□□□□□ -1.43
CKAP2-203ENST00000378037 TNFRSF6BO95407 300 aa6.15□□□□□ -1.43
CKAP2-203ENST00000378037 GAGE12FP0CL80 117 aa6.15□□□□□ -1.43
CKAP2-203ENST00000378037 GAGE12GP0CL81 117 aa6.15□□□□□ -1.43
CKAP2-203ENST00000378037 GAGE12IP0CL82 117 aa6.15□□□□□ -1.43
CKAP2-203ENST00000378037 PROK1P58294 105 aa6.15□□□□□ -1.43
CKAP2-203ENST00000378037 CSTL1Q9H114 145 aa6.15□□□□□ -1.43
CKAP2-203ENST00000378037 HSPB8Q9UJY1 196 aa6.15□□□□□ -1.43
CKAP2-203ENST00000378037 LINC01619G3V211 115 aa6.14□□□□□ -1.43
CKAP2-203ENST00000378037 NDUFA4O00483 81 aa6.14□□□□□ -1.43
CKAP2-203ENST00000378037 PAX2Q02962 417 aa6.14□□□□□ -1.43
CKAP2-203ENST00000378037 SRSF9Q13242 221 aaKnown RBP eCLIP6.14□□□□□ -1.43
CKAP2-203ENST00000378037 Q6ZSV7 163 aa6.14□□□□□ -1.43
CKAP2-203ENST00000378037 TMEM190Q8WZ59 177 aa6.14□□□□□ -1.43
CKAP2-203ENST00000378037 OPRPNQ99935 248 aaPredicted RBP6.14□□□□□ -1.43
CKAP2-203ENST00000378037 ZFAND3Q9H8U3 227 aa6.14□□□□□ -1.43
CKAP2-203ENST00000378037 SIGLEC8Q9NYZ4 499 aa6.14□□□□□ -1.43
CKAP2-203ENST00000378037 DKK2Q9UBU2 259 aa6.14□□□□□ -1.43
CKAP2-203ENST00000378037 M0R143 59 aa6.14□□□□□ -1.43
CKAP2-203ENST00000378037 CHTOPQ9Y3Y2 248 aaKnown RBP6.14□□□□□ -1.43
CKAP2-203ENST00000378037 C2orf70A6NJV1 201 aa6.14□□□□□ -1.43
CKAP2-203ENST00000378037 OR11H12B2RN74 326 aa6.14□□□□□ -1.43
CKAP2-203ENST00000378037 NUTF2P61970 127 aaKnown RBP6.14□□□□□ -1.43
CKAP2-203ENST00000378037 CEMP1Q6PRD7 247 aaPredicted RBP6.14□□□□□ -1.43
CKAP2-203ENST00000378037 OVOL1O14753 267 aa6.13□□□□□ -1.43
CKAP2-203ENST00000378037 Q8N6K4 173 aa6.13□□□□□ -1.43
CKAP2-203ENST00000378037 IFI27L1Q96BM0 104 aa6.13□□□□□ -1.43
CKAP2-203ENST00000378037 PEMTQ9UBM1 199 aa6.13□□□□□ -1.43
CKAP2-203ENST00000378037 CLPSL1A2RUU4 121 aa6.13□□□□□ -1.43
CKAP2-203ENST00000378037 Q1RN00 199 aa6.13□□□□□ -1.43
CKAP2-203ENST00000378037 KIR2DL4Q99706 377 aa6.13□□□□□ -1.43
CKAP2-203ENST00000378037 A0A0J9YY99 117 aa6.13□□□□□ -1.43
CKAP2-203ENST00000378037 IGLV2-11P01706 119 aa6.13□□□□□ -1.43
CKAP2-203ENST00000378037 RPL39P62891 51 aaKnown RBP6.13□□□□□ -1.43
CKAP2-203ENST00000378037 Q8N1Y9 231 aa6.13□□□□□ -1.43
CKAP2-203ENST00000378037 C2orf88Q9BSF0 95 aa6.13□□□□□ -1.43
CKAP2-203ENST00000378037 TNFRSF18Q9Y5U5 241 aa6.13□□□□□ -1.43
CKAP2-203ENST00000378037 PDE6HQ13956 83 aa6.12□□□□□ -1.43
CKAP2-203ENST00000378037 MPV17L2Q567V2 206 aa6.12□□□□□ -1.43
CKAP2-203ENST00000378037 FAM104BQ5XKR9 115 aa6.12□□□□□ -1.43
CKAP2-203ENST00000378037 ZNF492Q9P255 531 aa6.12□□□□□ -1.43
CKAP2-203ENST00000378037 TRAV13-1A0A0B4J241 112 aa6.12□□□□□ -1.43
CKAP2-203ENST00000378037 GAGE12JA6NER3 117 aa6.12□□□□□ -1.43
CKAP2-203ENST00000378037 LY6G6DO95868 133 aa6.12□□□□□ -1.43
CKAP2-203ENST00000378037 GATA3P23771 443 aa6.12□□□□□ -1.43
CKAP2-203ENST00000378037 RBX1P62877 108 aa6.12□□□□□ -1.43
CKAP2-203ENST00000378037 GAGE1Q13065 139 aa6.12□□□□□ -1.43
CKAP2-203ENST00000378037 GAGE4Q13068 117 aa6.12□□□□□ -1.43
CKAP2-203ENST00000378037 GAGE5Q13069 117 aa6.12□□□□□ -1.43
CKAP2-203ENST00000378037 GAGE13Q4V321 117 aa6.12□□□□□ -1.43
CKAP2-203ENST00000378037 MBD6Q96DN6 1003 aa6.12□□□□□ -1.43
CKAP2-203ENST00000378037 TMEM14CQ9P0S9 112 aa6.12□□□□□ -1.43
CKAP2-203ENST00000378037 TRBV9A0A0B4J1U6 114 aa6.12□□□□□ -1.43
CKAP2-203ENST00000378037 TRAV8-2A0A0B4J237 113 aa6.12□□□□□ -1.43
CKAP2-203ENST00000378037 A0A1B0GV72 72 aa6.12□□□□□ -1.43
CKAP2-203ENST00000378037 APOMO95445 188 aa6.12□□□□□ -1.43
CKAP2-203ENST00000378037 IGLL1P15814 213 aa6.12□□□□□ -1.43
CKAP2-203ENST00000378037 TSPOP30536 169 aa6.12□□□□□ -1.43
CKAP2-203ENST00000378037 NOP10Q9NPE3 64 aaKnown RBP6.12□□□□□ -1.43
CKAP2-203ENST00000378037 CRXO43186 299 aaPredicted RBP6.11□□□□□ -1.43
CKAP2-203ENST00000378037 HBDP02042 147 aa6.11□□□□□ -1.43
CKAP2-203ENST00000378037 LGALS1P09382 135 aaKnown RBP6.11□□□□□ -1.43
CKAP2-203ENST00000378037 CDKN1BP46527 198 aa6.11□□□□□ -1.43
CKAP2-203ENST00000378037 COX19Q49B96 90 aa6.11□□□□□ -1.43
CKAP2-203ENST00000378037 AMMECR1LQ6DCA0 310 aa6.11□□□□□ -1.43
CKAP2-203ENST00000378037 OR9G4Q8NGQ1 327 aa6.11□□□□□ -1.43
CKAP2-203ENST00000378037 SYS1-DBNDD2H3BUS1 97 aa6.11□□□□□ -1.43
CKAP2-203ENST00000378037 ZNF415Q09FC8 603 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms