RNA–Protein interactions for RNA: ENST00000368213.9

PTPRK-205, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,816 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-205ENST00000368213 RNASE13Q5GAN3 156 aaKnown RBP8.28□□□□□ -1.08
PTPRK-205ENST00000368213 ATRAIDQ6UW56 229 aa8.28□□□□□ -1.08
PTPRK-205ENST00000368213 SNHG12Q9BXW3 62 aa8.28□□□□□ -1.08
PTPRK-205ENST00000368213 MAP6D1Q9H9H5 199 aa8.28□□□□□ -1.08
PTPRK-205ENST00000368213 DSCAMO60469 2012 aa8.28□□□□□ -1.08
PTPRK-205ENST00000368213 IGLV10-54A0A075B6I4 117 aa8.28□□□□□ -1.08
PTPRK-205ENST00000368213 HERVK_113P63121 156 aa8.28□□□□□ -1.08
PTPRK-205ENST00000368213 UNQ9165/PRO28630Q6UXU0 137 aa8.28□□□□□ -1.08
PTPRK-205ENST00000368213 ODF3L1Q8IXM7 274 aa8.28□□□□□ -1.08
PTPRK-205ENST00000368213 AMTNQ6UX39 209 aa8.28□□□□□ -1.08
PTPRK-205ENST00000368213 NDUFAF3Q9BU61 184 aa8.28□□□□□ -1.08
PTPRK-205ENST00000368213 KIAA1549LQ6ZVL6 1849 aa8.28□□□□□ -1.08
PTPRK-205ENST00000368213 TNRC6AQ8NDV7 1962 aaKnown RBP8.27□□□□□ -1.08
PTPRK-205ENST00000368213 CDSNQ15517 529 aa8.27□□□□□ -1.08
PTPRK-205ENST00000368213 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.27□□□□□ -1.09
PTPRK-205ENST00000368213 IGKV2-29A2NJV5 120 aaPredicted RBP8.27□□□□□ -1.09
PTPRK-205ENST00000368213 CXCL1P09341 107 aa8.27□□□□□ -1.09
PTPRK-205ENST00000368213 CAMK2N2Q96S95 79 aa8.27□□□□□ -1.09
PTPRK-205ENST00000368213 FSTL3O95633 263 aa8.27□□□□□ -1.09
PTPRK-205ENST00000368213 ZC2HC1BQ5TFG8 222 aa8.27□□□□□ -1.09
PTPRK-205ENST00000368213 FAM110AQ9BQ89 295 aa8.27□□□□□ -1.09
PTPRK-205ENST00000368213 SHANK1Q9Y566 2161 aa8.27□□□□□ -1.09
PTPRK-205ENST00000368213 LINC01548A6NM66 108 aa8.27□□□□□ -1.09
PTPRK-205ENST00000368213 MBD6Q96DN6 1003 aa8.27□□□□□ -1.09
PTPRK-205ENST00000368213 TIRAPP58753 221 aa8.27□□□□□ -1.09
PTPRK-205ENST00000368213 LINC01006Q8NI28 216 aa8.26□□□□□ -1.09
PTPRK-205ENST00000368213 ZNF503Q96F45 646 aa8.26□□□□□ -1.09
PTPRK-205ENST00000368213 SPCS1Q9Y6A9 102 aa8.26□□□□□ -1.09
PTPRK-205ENST00000368213 HIST1H2BKO60814 126 aa8.26□□□□□ -1.09
PTPRK-205ENST00000368213 HIST1H2BJP06899 126 aa8.26□□□□□ -1.09
PTPRK-205ENST00000368213 HIST1H2BOP23527 126 aa8.26□□□□□ -1.09
PTPRK-205ENST00000368213 HIST1H2BBP33778 126 aa8.26□□□□□ -1.09
PTPRK-205ENST00000368213 HIST1H2BDP58876 126 aa8.26□□□□□ -1.09
PTPRK-205ENST00000368213 HIST1H2BCP62807 126 aa8.26□□□□□ -1.09
PTPRK-205ENST00000368213 ZNF726P1Q15940 193 aa8.26□□□□□ -1.09
PTPRK-205ENST00000368213 HIST2H2BEQ16778 126 aa8.26□□□□□ -1.09
PTPRK-205ENST00000368213 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.26□□□□□ -1.09
PTPRK-205ENST00000368213 HIST1H2BHQ93079 126 aa8.26□□□□□ -1.09
PTPRK-205ENST00000368213 C5orf30Q96GV9 206 aa8.26□□□□□ -1.09
PTPRK-205ENST00000368213 DNAJC30Q96LL9 226 aa8.26□□□□□ -1.09
PTPRK-205ENST00000368213 HIST1H2BNQ99877 126 aa8.26□□□□□ -1.09
PTPRK-205ENST00000368213 HIST1H2BMQ99879 126 aa8.26□□□□□ -1.09
PTPRK-205ENST00000368213 SMIM2Q9BVW6 85 aa8.26□□□□□ -1.09
PTPRK-205ENST00000368213 ESDP10768 282 aa8.26□□□□□ -1.09
PTPRK-205ENST00000368213 C10orf126Q8N4M7 172 aa8.26□□□□□ -1.09
PTPRK-205ENST00000368213 DYSFO75923 2080 aa8.26□□□□□ -1.09
PTPRK-205ENST00000368213 PCNTO95613 3336 aa8.25□□□□□ -1.09
PTPRK-205ENST00000368213 WI2-2373I1.2A0A1W2PRP0 233 aa8.25□□□□□ -1.09
PTPRK-205ENST00000368213 LTAP01374 205 aa8.25□□□□□ -1.09
PTPRK-205ENST00000368213 EGR2P11161 476 aaPredicted RBP8.25□□□□□ -1.09
PTPRK-205ENST00000368213 OVOL2Q9BRP0 275 aa8.25□□□□□ -1.09
PTPRK-205ENST00000368213 NAV2Q8IVL1 2488 aa8.25□□□□□ -1.09
PTPRK-205ENST00000368213 IGF1P05019 195 aa8.25□□□□□ -1.09
PTPRK-205ENST00000368213 PROP1O75360 226 aa8.25□□□□□ -1.09
PTPRK-205ENST00000368213 DAZ2Q13117 558 aaKnown RBP8.25□□□□□ -1.09
PTPRK-205ENST00000368213 TAL2Q16559 108 aa8.25□□□□□ -1.09
PTPRK-205ENST00000368213 DAZ4Q86SG3 579 aaKnown RBP8.25□□□□□ -1.09
PTPRK-205ENST00000368213 DAZ3Q9NR90 486 aaKnown RBP8.25□□□□□ -1.09
PTPRK-205ENST00000368213 PCDH15Q96QU1 1955 aa8.25□□□□□ -1.09
PTPRK-205ENST00000368213 HIVEP3Q5T1R4 2406 aa8.25□□□□□ -1.09
PTPRK-205ENST00000368213 Q8N1Y9 231 aa8.25□□□□□ -1.09
PTPRK-205ENST00000368213 H3BUT2 72 aa8.25□□□□□ -1.09
PTPRK-205ENST00000368213 FAM231DQ6ZW35 169 aa8.25□□□□□ -1.09
PTPRK-205ENST00000368213 C20orf78Q9BR46 151 aa8.25□□□□□ -1.09
PTPRK-205ENST00000368213 TMEM263Q8WUH6 116 aaKnown RBP8.24□□□□□ -1.09
PTPRK-205ENST00000368213 RPL32P62910 135 aaKnown RBP8.24□□□□□ -1.09
PTPRK-205ENST00000368213 TTC32Q5I0X7 151 aa8.24□□□□□ -1.09
PTPRK-205ENST00000368213 LINC00482Q8N8I6 264 aa8.24□□□□□ -1.09
PTPRK-205ENST00000368213 ORAOV1Q8WV07 137 aa8.24□□□□□ -1.09
PTPRK-205ENST00000368213 CCDC168Q8NDH2 2452 aa8.24□□□□□ -1.09
PTPRK-205ENST00000368213 C20orf144Q9BQM9 153 aa8.24□□□□□ -1.09
PTPRK-205ENST00000368213 C5orf38Q86SI9 138 aa8.24□□□□□ -1.09
PTPRK-205ENST00000368213 DEFB131BA0A096LNP1 70 aa8.23□□□□□ -1.09
PTPRK-205ENST00000368213 SPINK8P0C7L1 97 aa8.23□□□□□ -1.09
PTPRK-205ENST00000368213 HSD52Q0P140 79 aa8.23□□□□□ -1.09
PTPRK-205ENST00000368213 ASPHD1Q5U4P2 390 aa8.23□□□□□ -1.09
PTPRK-205ENST00000368213 ALPK3Q96L96 1907 aa8.23□□□□□ -1.09
PTPRK-205ENST00000368213 DEFB114Q30KQ6 69 aa8.23□□□□□ -1.09
PTPRK-205ENST00000368213 FANCD2OSQ96PS1 177 aa8.23□□□□□ -1.09
PTPRK-205ENST00000368213 PLCE1Q9P212 2302 aa8.23□□□□□ -1.09
PTPRK-205ENST00000368213 hDV102S1A0JD36 115 aa8.23□□□□□ -1.09
PTPRK-205ENST00000368213 DEFB1P60022 68 aa8.23□□□□□ -1.09
PTPRK-205ENST00000368213 GAGE2EQ4V326 116 aa8.23□□□□□ -1.09
PTPRK-205ENST00000368213 GAGE2DQ9UEU5 116 aa8.23□□□□□ -1.09
PTPRK-205ENST00000368213 PRO0255Q9UI72 69 aa8.23□□□□□ -1.09
PTPRK-205ENST00000368213 EML6Q6ZMW3 1958 aa8.23□□□□□ -1.09
PTPRK-205ENST00000368213 CHD3Q12873 2000 aaKnown RBP8.23□□□□□ -1.09
PTPRK-205ENST00000368213 SYS1-DBNDD2H3BUS1 97 aa8.23□□□□□ -1.09
PTPRK-205ENST00000368213 LGALS9O00182 355 aa8.23□□□□□ -1.09
PTPRK-205ENST00000368213 COX7A2LO14548 114 aa8.22□□□□□ -1.09
PTPRK-205ENST00000368213 CCDC140Q96MF4 163 aa8.22□□□□□ -1.09
PTPRK-205ENST00000368213 SCRT2Q9NQ03 307 aa8.22□□□□□ -1.09
PTPRK-205ENST00000368213 E7EUB6 86 aa8.22□□□□□ -1.09
PTPRK-205ENST00000368213 NDUFA12Q9UI09 145 aa8.22□□□□□ -1.09
PTPRK-205ENST00000368213 NPYP01303 97 aa8.22□□□□□ -1.09
PTPRK-205ENST00000368213 PRB2P02812 416 aaPredicted RBP8.22□□□□□ -1.09
PTPRK-205ENST00000368213 GAGE2BQ13066 116 aa8.22□□□□□ -1.09
PTPRK-205ENST00000368213 BBC3Q96PG8 261 aaPredicted RBP8.22□□□□□ -1.09
PTPRK-205ENST00000368213 ZNF702PQ9H963 129 aa8.22□□□□□ -1.09
PTPRK-205ENST00000368213 A0A0J9YX75 114 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms