RNA–Protein interactions for RNA: ENST00000366304.3

HMGB1P39-201, Transcript of high mobility group box 1 pseudogene 39, humanhuman

BASIC

Gene HMGB1P39, Length 880 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P39-201ENST00000366304 CRYM-AS1A6NIL9 109 aa5.49□□□□□ -1.53
HMGB1P39-201ENST00000366304 ARPC5O15511 151 aa5.49□□□□□ -1.53
HMGB1P39-201ENST00000366304 BCL2L11O43521 198 aa5.49□□□□□ -1.53
HMGB1P39-201ENST00000366304 SIX6O95475 246 aa5.49□□□□□ -1.53
HMGB1P39-201ENST00000366304 IGLV2-11P01706 119 aa5.49□□□□□ -1.53
HMGB1P39-201ENST00000366304 BTCP35070 178 aa5.49□□□□□ -1.53
HMGB1P39-201ENST00000366304 CAV2P51636 162 aa5.49□□□□□ -1.53
HMGB1P39-201ENST00000366304 RANP62826 216 aaKnown RBP5.49□□□□□ -1.53
HMGB1P39-201ENST00000366304 MORN5Q5VZ52 161 aa5.49□□□□□ -1.53
HMGB1P39-201ENST00000366304 PET117Q6UWS5 81 aa5.49□□□□□ -1.53
HMGB1P39-201ENST00000366304 C9orf47Q6ZRZ4 202 aa5.49□□□□□ -1.53
HMGB1P39-201ENST00000366304 DNAJC30Q96LL9 226 aa5.49□□□□□ -1.53
HMGB1P39-201ENST00000366304 FAM19A4Q96LR4 140 aa5.49□□□□□ -1.53
HMGB1P39-201ENST00000366304 SLC25A21Q9BQT8 299 aaPredicted RBP5.49□□□□□ -1.53
HMGB1P39-201ENST00000366304 GPR132Q9UNW8 380 aa5.49□□□□□ -1.53
HMGB1P39-201ENST00000366304 HIGD1AQ9Y241 93 aa5.49□□□□□ -1.53
HMGB1P39-201ENST00000366304 TRGV4A0A0C4DH28 118 aa5.48□□□□□ -1.53
HMGB1P39-201ENST00000366304 KLLNB2CW77 178 aa5.48□□□□□ -1.53
HMGB1P39-201ENST00000366304 H3BQ15 152 aa5.48□□□□□ -1.53
HMGB1P39-201ENST00000366304 PANO1I0J062 215 aa5.48□□□□□ -1.53
HMGB1P39-201ENST00000366304 PITX3O75364 302 aa5.48□□□□□ -1.53
HMGB1P39-201ENST00000366304 HYPMO75409 117 aa5.48□□□□□ -1.53
HMGB1P39-201ENST00000366304 TPT1P13693 172 aaKnown RBP5.48□□□□□ -1.53
HMGB1P39-201ENST00000366304 LEPP41159 167 aa5.48□□□□□ -1.53
HMGB1P39-201ENST00000366304 RBX1P62877 108 aa5.48□□□□□ -1.53
HMGB1P39-201ENST00000366304 SLAQ13239 276 aa5.48□□□□□ -1.53
HMGB1P39-201ENST00000366304 CYP2G1PQ6ZSU1 146 aa5.48□□□□□ -1.53
HMGB1P39-201ENST00000366304 ZNF546Q86UE3 836 aa5.48□□□□□ -1.53
HMGB1P39-201ENST00000366304 SMIM8Q96KF7 97 aa5.48□□□□□ -1.53
HMGB1P39-201ENST00000366304 ODF3Q96PU9 254 aa5.48□□□□□ -1.53
HMGB1P39-201ENST00000366304 C20orf85Q9H1P6 137 aa5.48□□□□□ -1.53
HMGB1P39-201ENST00000366304 ZFP30Q9Y2G7 519 aa5.48□□□□□ -1.53
HMGB1P39-201ENST00000366304 C20orf202A1L168 122 aa5.47□□□□□ -1.53
HMGB1P39-201ENST00000366304 RBFOX3A6NFN3 312 aa5.47□□□□□ -1.53
HMGB1P39-201ENST00000366304 NDUFB6O95139 128 aa5.47□□□□□ -1.53
HMGB1P39-201ENST00000366304 OR5G3P0C626 314 aa5.47□□□□□ -1.53
HMGB1P39-201ENST00000366304 LINC00869P0C866 280 aa5.47□□□□□ -1.53
HMGB1P39-201ENST00000366304 AKR1C4P17516 323 aa5.47□□□□□ -1.53
HMGB1P39-201ENST00000366304 RNASE4P34096 147 aaKnown RBP5.47□□□□□ -1.53
HMGB1P39-201ENST00000366304 ATP5IP56385 69 aaPredicted RBP5.47□□□□□ -1.53
HMGB1P39-201ENST00000366304 TIRAPP58753 221 aa5.47□□□□□ -1.53
HMGB1P39-201ENST00000366304 PLP1P60201 277 aa5.47□□□□□ -1.53
HMGB1P39-201ENST00000366304 ATP6V1FQ16864 119 aa5.47□□□□□ -1.53
HMGB1P39-201ENST00000366304 Q6ZRU5 148 aa5.47□□□□□ -1.53
HMGB1P39-201ENST00000366304 OR10D4PQ8NGN7 298 aa5.47□□□□□ -1.53
HMGB1P39-201ENST00000366304 SMIM12Q96EX1 92 aa5.47□□□□□ -1.53
HMGB1P39-201ENST00000366304 RPH3ALQ9UNE2 315 aa5.47□□□□□ -1.53
HMGB1P39-201ENST00000366304 FXYD6-FXYD2A0A087WZ82 144 aa5.46□□□□□ -1.54
HMGB1P39-201ENST00000366304 TMEM238C9JI98 176 aa5.46□□□□□ -1.54
HMGB1P39-201ENST00000366304 SLC25A5P05141 298 aaKnown RBP5.46□□□□□ -1.54
HMGB1P39-201ENST00000366304 CYCSP99999 105 aaKnown RBP5.46□□□□□ -1.54
HMGB1P39-201ENST00000366304 ACOT6Q3I5F7 207 aaPredicted RBP5.46□□□□□ -1.54
HMGB1P39-201ENST00000366304 TMEM128Q5BJH2 165 aa5.46□□□□□ -1.54
HMGB1P39-201ENST00000366304 IBA57Q5T440 356 aaKnown RBP5.46□□□□□ -1.54
HMGB1P39-201ENST00000366304 LCN15Q6UWW0 184 aa5.46□□□□□ -1.54
HMGB1P39-201ENST00000366304 INO80EQ8NBZ0 244 aaPredicted RBP5.46□□□□□ -1.54
HMGB1P39-201ENST00000366304 OR10P1Q8NGE3 313 aa5.46□□□□□ -1.54
HMGB1P39-201ENST00000366304 OR10G4Q8NGN3 311 aa5.46□□□□□ -1.54
HMGB1P39-201ENST00000366304 ORAOV1Q8WV07 137 aa5.46□□□□□ -1.54
HMGB1P39-201ENST00000366304 AGPAT4-IT1Q9H0P7 198 aa5.46□□□□□ -1.54
HMGB1P39-201ENST00000366304 RPS10P5Q9NQ39 176 aa5.46□□□□□ -1.54
HMGB1P39-201ENST00000366304 A0A087WWC5 75 aa5.45□□□□□ -1.54
HMGB1P39-201ENST00000366304 H3BP45 60 aa5.45□□□□□ -1.54
HMGB1P39-201ENST00000366304 M0R3E3 92 aa5.45□□□□□ -1.54
HMGB1P39-201ENST00000366304 TAAR5O14804 337 aa5.45□□□□□ -1.54
HMGB1P39-201ENST00000366304 ORM1P02763 201 aa5.45□□□□□ -1.54
HMGB1P39-201ENST00000366304 IGLC2P0DOY2 106 aa5.45□□□□□ -1.54
HMGB1P39-201ENST00000366304 NDUFA6P56556 154 aa5.45□□□□□ -1.54
HMGB1P39-201ENST00000366304 UBE2MP61081 183 aaKnown RBP5.45□□□□□ -1.54
HMGB1P39-201ENST00000366304 SELENOTP62341 195 aa5.45□□□□□ -1.54
HMGB1P39-201ENST00000366304 RAB11AP62491 216 aa5.45□□□□□ -1.54
HMGB1P39-201ENST00000366304 SRPXP78539 464 aa5.45□□□□□ -1.54
HMGB1P39-201ENST00000366304 AKR1C1Q04828 323 aa5.45□□□□□ -1.54
HMGB1P39-201ENST00000366304 LAGE3Q14657 143 aa5.45□□□□□ -1.54
HMGB1P39-201ENST00000366304 GUK1Q16774 197 aa5.45□□□□□ -1.54
HMGB1P39-201ENST00000366304 IQCJQ1A5X6 159 aa5.45□□□□□ -1.54
HMGB1P39-201ENST00000366304 COL5A1-AS1Q5SY13 56 aa5.45□□□□□ -1.54
HMGB1P39-201ENST00000366304 MTURNQ8N3F0 131 aa5.45□□□□□ -1.54
HMGB1P39-201ENST00000366304 ZFAND2AQ8N6M9 145 aa5.45□□□□□ -1.54
HMGB1P39-201ENST00000366304 TXNDC17Q9BRA2 123 aa5.45□□□□□ -1.54
HMGB1P39-201ENST00000366304 SLC50A1Q9BRV3 221 aa5.45□□□□□ -1.54
HMGB1P39-201ENST00000366304 TM2D2Q9BX73 214 aa5.45□□□□□ -1.54
HMGB1P39-201ENST00000366304 ZNF471Q9BX82 626 aaPredicted RBP5.45□□□□□ -1.54
HMGB1P39-201ENST00000366304 SLC25A31Q9H0C2 315 aa5.45□□□□□ -1.54
HMGB1P39-201ENST00000366304 LYRM2Q9NU23 88 aaPredicted RBP5.45□□□□□ -1.54
HMGB1P39-201ENST00000366304 VAX2Q9UIW0 290 aa5.45□□□□□ -1.54
HMGB1P39-201ENST00000366304 TNFSF18Q9UNG2 199 aa5.45□□□□□ -1.54
HMGB1P39-201ENST00000366304 A0A0B4J2A0 478 aa5.44□□□□□ -1.54
HMGB1P39-201ENST00000366304 PIGBOS1A0A0B4J2F0 54 aa5.44□□□□□ -1.54
HMGB1P39-201ENST00000366304 IGHV3-16A0A0C4DH30 117 aa5.44□□□□□ -1.54
HMGB1P39-201ENST00000366304 C7orf77A4D0Y5 90 aa5.44□□□□□ -1.54
HMGB1P39-201ENST00000366304 PHOX2AO14813 284 aa5.44□□□□□ -1.54
HMGB1P39-201ENST00000366304 MPDU1O75352 247 aa5.44□□□□□ -1.54
HMGB1P39-201ENST00000366304 SFT2D2O95562 160 aa5.44□□□□□ -1.54
HMGB1P39-201ENST00000366304 SCGB1A1P11684 91 aa5.44□□□□□ -1.54
HMGB1P39-201ENST00000366304 ADCYAP1P18509 176 aa5.44□□□□□ -1.54
HMGB1P39-201ENST00000366304 PPP1R1AQ13522 171 aa5.44□□□□□ -1.54
HMGB1P39-201ENST00000366304 OR10J3Q5JRS4 329 aa5.44□□□□□ -1.54
HMGB1P39-201ENST00000366304 DAZ4Q86SG3 579 aaKnown RBP5.44□□□□□ -1.54
HMGB1P39-201ENST00000366304 HIST3H2BBQ8N257 126 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms