RNA–Protein interactions for RNA: ENST00000360859.10

COL9A1-203, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 699 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-203ENST00000360859 C5orf17Q8NAS9 161 aa11.5□□□□□ -0.57
COL9A1-203ENST00000360859 PSG8Q9UQ74 426 aa11.5□□□□□ -0.57
COL9A1-203ENST00000360859 LECT2O14960 151 aa11.49□□□□□ -0.57
COL9A1-203ENST00000360859 IGLV2-11P01706 119 aa11.49□□□□□ -0.57
COL9A1-203ENST00000360859 LINC00528Q8N1L1 170 aa11.49□□□□□ -0.57
COL9A1-203ENST00000360859 DNAH8Q96JB1 4490 aa11.48□□□□□ -0.57
COL9A1-203ENST00000360859 TRAV8-3A0A0A6YYJ7 113 aa11.48□□□□□ -0.57
COL9A1-203ENST00000360859 K7EQM0 130 aa11.48□□□□□ -0.57
COL9A1-203ENST00000360859 CDC34P49427 236 aaPredicted RBP11.48□□□□□ -0.57
COL9A1-203ENST00000360859 SMUG1Q53HV7 270 aa11.48□□□□□ -0.57
COL9A1-203ENST00000360859 SUN5Q8TC36 379 aa11.48□□□□□ -0.57
COL9A1-203ENST00000360859 GAGE12JA6NER3 117 aa11.47□□□□□ -0.57
COL9A1-203ENST00000360859 STAG3L2P0CL84 134 aa11.47□□□□□ -0.57
COL9A1-203ENST00000360859 STAG3L3P0CL85 134 aa11.47□□□□□ -0.57
COL9A1-203ENST00000360859 LINC00694P0DN24 101 aa11.47□□□□□ -0.57
COL9A1-203ENST00000360859 GAGE1Q13065 139 aa11.47□□□□□ -0.57
COL9A1-203ENST00000360859 GAGE4Q13068 117 aa11.47□□□□□ -0.57
COL9A1-203ENST00000360859 GAGE5Q13069 117 aa11.47□□□□□ -0.57
COL9A1-203ENST00000360859 ZFP69Q49AA0 526 aa11.47□□□□□ -0.57
COL9A1-203ENST00000360859 GAGE13Q4V321 117 aa11.47□□□□□ -0.57
COL9A1-203ENST00000360859 DAZ4Q86SG3 579 aaKnown RBP11.47□□□□□ -0.57
COL9A1-203ENST00000360859 PRNTQ86SH4 94 aa11.47□□□□□ -0.57
COL9A1-203ENST00000360859 SH3BGRL3Q9H299 93 aa11.47□□□□□ -0.57
COL9A1-203ENST00000360859 PARLQ9H300 379 aa11.47□□□□□ -0.57
COL9A1-203ENST00000360859 DAZ3Q9NR90 486 aaKnown RBP11.47□□□□□ -0.57
COL9A1-203ENST00000360859 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.46□□□□□ -0.57
COL9A1-203ENST00000360859 KRTAP29-1A8MX34 341 aaPredicted RBP11.46□□□□□ -0.57
COL9A1-203ENST00000360859 GCHFRP30047 84 aa11.46□□□□□ -0.57
COL9A1-203ENST00000360859 FLI1Q01543 452 aaPredicted RBP11.46□□□□□ -0.57
COL9A1-203ENST00000360859 ZFP2Q6ZN57 461 aa11.46□□□□□ -0.57
COL9A1-203ENST00000360859 RAB24Q969Q5 203 aa11.46□□□□□ -0.57
COL9A1-203ENST00000360859 Q9UF83 564 aa11.46□□□□□ -0.57
COL9A1-203ENST00000360859 EPDR1Q9UM22 224 aa11.46□□□□□ -0.57
COL9A1-203ENST00000360859 GGTLC3B5MD39 225 aa11.45□□□□□ -0.58
COL9A1-203ENST00000360859 SUMO1P63165 101 aaKnown RBP11.45□□□□□ -0.58
COL9A1-203ENST00000360859 TOR2AQ5JU69 321 aa11.45□□□□□ -0.58
COL9A1-203ENST00000360859 OR2T35Q8NGX2 323 aa11.45□□□□□ -0.58
COL9A1-203ENST00000360859 OR2G3Q8NGZ4 309 aa11.45□□□□□ -0.58
COL9A1-203ENST00000360859 DEFB104AQ8WTQ1 72 aa11.45□□□□□ -0.58
COL9A1-203ENST00000360859 IGKV3D-20A0A0C4DH25 116 aa11.44□□□□□ -0.58
COL9A1-203ENST00000360859 A8MWV9 139 aa11.44□□□□□ -0.58
COL9A1-203ENST00000360859 LGALSLQ3ZCW2 172 aaPredicted RBP11.44□□□□□ -0.58
COL9A1-203ENST00000360859 LINC01620Q4KN68 170 aa11.44□□□□□ -0.58
COL9A1-203ENST00000360859 PIK3CD-AS1Q5SR53 167 aa11.44□□□□□ -0.58
COL9A1-203ENST00000360859 SAPCD1Q5SSQ6 148 aa11.44□□□□□ -0.58
COL9A1-203ENST00000360859 CYB561D1Q8N8Q1 229 aa11.44□□□□□ -0.58
COL9A1-203ENST00000360859 HSD17B11Q8NBQ5 300 aa11.44□□□□□ -0.58
COL9A1-203ENST00000360859 BAALCQ8WXS3 180 aa11.44□□□□□ -0.58
COL9A1-203ENST00000360859 LINC00479Q96M42 142 aa11.44□□□□□ -0.58
COL9A1-203ENST00000360859 A0A087WWC5 75 aa11.43□□□□□ -0.58
COL9A1-203ENST00000360859 S100A4P26447 101 aaKnown RBP11.43□□□□□ -0.58
COL9A1-203ENST00000360859 UFSP1Q6NVU6 142 aa11.43□□□□□ -0.58
COL9A1-203ENST00000360859 C14orf178Q8N769 122 aaPredicted RBP11.43□□□□□ -0.58
COL9A1-203ENST00000360859 SAMD10Q9BYL1 202 aa11.43□□□□□ -0.58
COL9A1-203ENST00000360859 SCXQ7RTU7 201 aa11.42□□□□□ -0.58
COL9A1-203ENST00000360859 PSMG3Q9BT73 122 aaPredicted RBP11.42□□□□□ -0.58
COL9A1-203ENST00000360859 JPT2Q9H910 190 aa11.42□□□□□ -0.58
COL9A1-203ENST00000360859 TMEM167BQ9NRX6 74 aa11.42□□□□□ -0.58
COL9A1-203ENST00000360859 COX11Q9Y6N1 276 aa11.42□□□□□ -0.58
COL9A1-203ENST00000360859 CXorf1O96002 111 aa11.41□□□□□ -0.58
COL9A1-203ENST00000360859 ATP6V0CP27449 155 aa11.41□□□□□ -0.58
COL9A1-203ENST00000360859 ASIPP42127 132 aa11.41□□□□□ -0.58
COL9A1-203ENST00000360859 FGF8P55075 233 aaPredicted RBP11.41□□□□□ -0.58
COL9A1-203ENST00000360859 DNAJC30Q96LL9 226 aa11.41□□□□□ -0.58
COL9A1-203ENST00000360859 TRAV34A0A0B4J273 112 aa11.4□□□□□ -0.58
COL9A1-203ENST00000360859 RBFOX3A6NFN3 312 aa11.4□□□□□ -0.58
COL9A1-203ENST00000360859 MBP02144 154 aa11.4□□□□□ -0.58
COL9A1-203ENST00000360859 RMI2Q96E14 147 aa11.4□□□□□ -0.58
COL9A1-203ENST00000360859 IL36BQ9NZH7 164 aa11.4□□□□□ -0.58
COL9A1-203ENST00000360859 URGCP-MRPS24S4R325 110 aa11.4□□□□□ -0.58
COL9A1-203ENST00000360859 ARL2-SNX15V9GYD0 113 aa11.4□□□□□ -0.58
COL9A1-203ENST00000360859 RNF222A6NCQ9 220 aa11.39□□□□□ -0.59
COL9A1-203ENST00000360859 FABP5P3A8MUU1 101 aa11.39□□□□□ -0.59
COL9A1-203ENST00000360859 DEFA1P59665 94 aa11.39□□□□□ -0.59
COL9A1-203ENST00000360859 DEFA3P59666 94 aa11.39□□□□□ -0.59
COL9A1-203ENST00000360859 SERF2P84101 59 aa11.39□□□□□ -0.59
COL9A1-203ENST00000360859 DMRTA1Q5VZB9 504 aa11.39□□□□□ -0.59
COL9A1-203ENST00000360859 NIT1Q86X76 327 aa11.39□□□□□ -0.59
COL9A1-203ENST00000360859 Q8N976 141 aa11.39□□□□□ -0.59
COL9A1-203ENST00000360859 ACTR3CQ9C0K3 210 aaPredicted RBP11.39□□□□□ -0.59
COL9A1-203ENST00000360859 IGKV2D-24A0A075B6R9 120 aa11.38□□□□□ -0.59
COL9A1-203ENST00000360859 A0A1W2PRE2 83 aa11.38□□□□□ -0.59
COL9A1-203ENST00000360859 B4DEV8 164 aa11.38□□□□□ -0.59
COL9A1-203ENST00000360859 H3BVH4 76 aa11.38□□□□□ -0.59
COL9A1-203ENST00000360859 KRTAP10-4P60372 401 aaPredicted RBP11.38□□□□□ -0.59
COL9A1-203ENST00000360859 CHAC1Q9BUX1 264 aa11.38□□□□□ -0.59
COL9A1-203ENST00000360859 KLK12Q9UKR0 248 aa11.38□□□□□ -0.59
COL9A1-203ENST00000360859 RHODO00212 210 aa11.37□□□□□ -0.59
COL9A1-203ENST00000360859 SEC11BP0C7V7 166 aa11.37□□□□□ -0.59
COL9A1-203ENST00000360859 AQP10Q96PS8 301 aa11.37□□□□□ -0.59
COL9A1-203ENST00000360859 TNFSF18Q9UNG2 199 aa11.37□□□□□ -0.59
COL9A1-203ENST00000360859 IFNA7P01567 189 aa11.36□□□□□ -0.59
COL9A1-203ENST00000360859 FAM74A4Q5TZK3 123 aa11.36□□□□□ -0.59
COL9A1-203ENST00000360859 Q86TA4 180 aa11.36□□□□□ -0.59
COL9A1-203ENST00000360859 SYT8Q8NBV8 401 aa11.36□□□□□ -0.59
COL9A1-203ENST00000360859 KRBOX1C9JBD0 128 aa11.35□□□□□ -0.59
COL9A1-203ENST00000360859 PEX7O00628 323 aa11.35□□□□□ -0.59
COL9A1-203ENST00000360859 ARMS2P0C7Q2 107 aa11.35□□□□□ -0.59
COL9A1-203ENST00000360859 CRIP1P50238 77 aa11.35□□□□□ -0.59
COL9A1-203ENST00000360859 DNLZQ5SXM8 178 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms