RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 HOXB4P17483 251 aaPredicted RBP10.72□□□□□ -0.69
VCP-201ENST00000358901 TAL2Q16559 108 aa10.72□□□□□ -0.69
VCP-201ENST00000358901 KLF12Q9Y4X4 402 aa10.72□□□□□ -0.69
VCP-201ENST00000358901 RNASE13Q5GAN3 156 aaKnown RBP10.71□□□□□ -0.69
VCP-201ENST00000358901 TTTY13Q9BZ97 58 aa10.71□□□□□ -0.69
VCP-201ENST00000358901 OBSL1O75147 1896 aa10.71□□□□□ -0.7
VCP-201ENST00000358901 ZNF106Q9H2Y7 1883 aaKnown RBP10.71□□□□□ -0.7
VCP-201ENST00000358901 UTF1Q5T230 341 aa10.7□□□□□ -0.7
VCP-201ENST00000358901 ZNF493Q6ZR52 646 aa10.7□□□□□ -0.7
VCP-201ENST00000358901 BUB3O43684 328 aa10.7□□□□□ -0.7
VCP-201ENST00000358901 CR1LQ2VPA4 569 aa10.7□□□□□ -0.7
VCP-201ENST00000358901 LAMTOR3Q9UHA4 124 aa10.7□□□□□ -0.7
VCP-201ENST00000358901 LENEPQ9Y5L5 61 aa10.7□□□□□ -0.7
VCP-201ENST00000358901 LINC01619G3V211 115 aa10.7□□□□□ -0.7
VCP-201ENST00000358901 IGLV2-23P01705 113 aa10.7□□□□□ -0.7
VCP-201ENST00000358901 GAGE2AQ6NT46 116 aa10.7□□□□□ -0.7
VCP-201ENST00000358901 ZNF503Q96F45 646 aa10.7□□□□□ -0.7
VCP-201ENST00000358901 NCKAP5O14513 1909 aa10.7□□□□□ -0.7
VCP-201ENST00000358901 TEX22C9J3V5 150 aa10.7□□□□□ -0.7
VCP-201ENST00000358901 PFN2P35080 140 aa10.7□□□□□ -0.7
VCP-201ENST00000358901 PRAC2D3DTV9 90 aa10.69□□□□□ -0.7
VCP-201ENST00000358901 AZU1P20160 251 aa10.69□□□□□ -0.7
VCP-201ENST00000358901 SP5Q6BEB4 398 aaPredicted RBP10.69□□□□□ -0.7
VCP-201ENST00000358901 RPL39LQ96EH5 51 aaKnown RBP10.69□□□□□ -0.7
VCP-201ENST00000358901 GAGE12HA6NDE8 117 aa10.69□□□□□ -0.7
VCP-201ENST00000358901 NPBQ8NG41 125 aa10.69□□□□□ -0.7
VCP-201ENST00000358901 RBAKDNA6NC62 111 aa10.68□□□□□ -0.7
VCP-201ENST00000358901 H3BMM0 161 aa10.68□□□□□ -0.7
VCP-201ENST00000358901 UBE2WQ96B02 151 aa10.68□□□□□ -0.7
VCP-201ENST00000358901 USP9XQ93008 2570 aaPredicted RBP10.68□□□□□ -0.7
VCP-201ENST00000358901 GAGE7O76087 117 aa10.68□□□□□ -0.7
VCP-201ENST00000358901 GAGE12FP0CL80 117 aa10.68□□□□□ -0.7
VCP-201ENST00000358901 GAGE12GP0CL81 117 aa10.68□□□□□ -0.7
VCP-201ENST00000358901 GAGE12IP0CL82 117 aa10.68□□□□□ -0.7
VCP-201ENST00000358901 DNAH12Q6ZR08 3092 aa10.68□□□□□ -0.7
VCP-201ENST00000358901 INS-IGF2F8WCM5 200 aa10.68□□□□□ -0.7
VCP-201ENST00000358901 BLCAPP62952 87 aa10.68□□□□□ -0.7
VCP-201ENST00000358901 SS18Q15532 418 aa10.68□□□□□ -0.7
VCP-201ENST00000358901 MRPL53Q96EL3 112 aaKnown RBP10.68□□□□□ -0.7
VCP-201ENST00000358901 CGB3P0DN86 165 aa10.67□□□□□ -0.7
VCP-201ENST00000358901 CGB7P0DN87 165 aa10.67□□□□□ -0.7
VCP-201ENST00000358901 Q8N9W7 124 aa10.67□□□□□ -0.7
VCP-201ENST00000358901 IGHV4-59P01825 116 aa10.67□□□□□ -0.7
VCP-201ENST00000358901 ATP6V0BQ99437 205 aa10.67□□□□□ -0.7
VCP-201ENST00000358901 K7EMI3 77 aa10.66□□□□□ -0.7
VCP-201ENST00000358901 SPAG8Q99932 426 aaPredicted RBP10.66□□□□□ -0.7
VCP-201ENST00000358901 SCRT2Q9NQ03 307 aa10.66□□□□□ -0.7
VCP-201ENST00000358901 ADAMTS9Q9P2N4 1935 aa10.66□□□□□ -0.7
VCP-201ENST00000358901 USP9YO00507 2555 aaPredicted RBP10.66□□□□□ -0.7
VCP-201ENST00000358901 TANC2Q9HCD6 1990 aa10.66□□□□□ -0.7
VCP-201ENST00000358901 IGKV1D-37A0A075B6S9 117 aa10.65□□□□□ -0.7
VCP-201ENST00000358901 IGHV4-61A0A0C4DH41 118 aa10.65□□□□□ -0.7
VCP-201ENST00000358901 ELANEP08246 267 aa10.65□□□□□ -0.7
VCP-201ENST00000358901 RNASE8Q8TDE3 154 aaKnown RBP10.65□□□□□ -0.7
VCP-201ENST00000358901 TEX48A0A1B0GUV7 120 aa10.65□□□□□ -0.7
VCP-201ENST00000358901 SH2D6Q7Z4S9 175 aa10.65□□□□□ -0.7
VCP-201ENST00000358901 ZNF48Q96MX3 618 aaPredicted RBP10.65□□□□□ -0.7
VCP-201ENST00000358901 CRYGCP07315 174 aa10.65□□□□□ -0.7
VCP-201ENST00000358901 GAGE6Q13070 117 aa10.65□□□□□ -0.7
VCP-201ENST00000358901 DEFB112Q30KQ8 113 aa10.65□□□□□ -0.7
VCP-201ENST00000358901 TMEM243Q9BU79 118 aa10.65□□□□□ -0.7
VCP-201ENST00000358901 AJUBAQ96IF1 538 aa10.64□□□□□ -0.71
VCP-201ENST00000358901 NBL1P41271 181 aa10.64□□□□□ -0.71
VCP-201ENST00000358901 FXYD2P54710 66 aa10.64□□□□□ -0.71
VCP-201ENST00000358901 LINC00322Q6ZN03 302 aaPredicted RBP10.64□□□□□ -0.71
VCP-201ENST00000358901 Q8N7P7 452 aa10.64□□□□□ -0.71
VCP-201ENST00000358901 OVOL2Q9BRP0 275 aa10.64□□□□□ -0.71
VCP-201ENST00000358901 C19orf71A6NCJ1 209 aa10.64□□□□□ -0.71
VCP-201ENST00000358901 H3BUA1 57 aa10.64□□□□□ -0.71
VCP-201ENST00000358901 NXPH4O95158 308 aa10.64□□□□□ -0.71
VCP-201ENST00000358901 IGLV2-8P01709 118 aa10.64□□□□□ -0.71
VCP-201ENST00000358901 WI2-2373I1.2A0A1W2PRP0 233 aa10.63□□□□□ -0.71
VCP-201ENST00000358901 HOXD3P31249 432 aaPredicted RBP10.63□□□□□ -0.71
VCP-201ENST00000358901 DEFB1P60022 68 aa10.63□□□□□ -0.71
VCP-201ENST00000358901 Q96MF0 132 aa10.63□□□□□ -0.71
VCP-201ENST00000358901 C2orf70A6NJV1 201 aa10.63□□□□□ -0.71
VCP-201ENST00000358901 IGHV4-38-2P0DP08 117 aa10.63□□□□□ -0.71
VCP-201ENST00000358901 C1orf229Q6ZS94 237 aaPredicted RBP10.63□□□□□ -0.71
VCP-201ENST00000358901 NTN5Q8WTR8 489 aaPredicted RBP10.63□□□□□ -0.71
VCP-201ENST00000358901 DNAJC30Q96LL9 226 aa10.63□□□□□ -0.71
VCP-201ENST00000358901 EDA2RQ9HAV5 297 aa10.63□□□□□ -0.71
VCP-201ENST00000358901 DEFB136Q30KP8 78 aa10.63□□□□□ -0.71
VCP-201ENST00000358901 COL4A4P53420 1690 aaPredicted RBP10.63□□□□□ -0.71
VCP-201ENST00000358901 KIAA1549LQ6ZVL6 1849 aa10.63□□□□□ -0.71
VCP-201ENST00000358901 IGLL5B9A064 214 aa10.63□□□□□ -0.71
VCP-201ENST00000358901 TAX1BP3O14907 124 aa10.63□□□□□ -0.71
VCP-201ENST00000358901 CFC1BP0CG36 223 aa10.62□□□□□ -0.71
VCP-201ENST00000358901 CFC1P0CG37 223 aa10.62□□□□□ -0.71
VCP-201ENST00000358901 FANCD2OSQ96PS1 177 aa10.62□□□□□ -0.71
VCP-201ENST00000358901 INAFM2P0DMQ5 153 aa10.62□□□□□ -0.71
VCP-201ENST00000358901 SRSF2Q01130 221 aaKnown RBP10.62□□□□□ -0.71
VCP-201ENST00000358901 RHOHQ15669 191 aa10.62□□□□□ -0.71
VCP-201ENST00000358901 IGF2-ASQ6U949 168 aa10.62□□□□□ -0.71
VCP-201ENST00000358901 FOXI2Q6ZQN5 318 aa10.62□□□□□ -0.71
VCP-201ENST00000358901 TMEM131Q92545 1883 aa10.62□□□□□ -0.71
VCP-201ENST00000358901 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.61□□□□□ -0.71
VCP-201ENST00000358901 A0A0J9YXV3 536 aa10.61□□□□□ -0.71
VCP-201ENST00000358901 IGKV2-29A2NJV5 120 aaPredicted RBP10.61□□□□□ -0.71
VCP-201ENST00000358901 CARD19Q96LW7 228 aa10.61□□□□□ -0.71
VCP-201ENST00000358901 ZFP36P26651 326 aaKnown RBP10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 125.9 ms