RNA–Protein interactions for RNA: ENST00000358808.6

CLIP1-202, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLIP1, Length 5,880 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-202ENST00000358808 K7EP34 96 aa8.01□□□□□ -1.13
CLIP1-202ENST00000358808 PLA2G5P39877 138 aa8.01□□□□□ -1.13
CLIP1-202ENST00000358808 TMEM14CQ9P0S9 112 aa8.01□□□□□ -1.13
CLIP1-202ENST00000358808 IGKV3D-7A0A0C4DH55 119 aa8.01□□□□□ -1.13
CLIP1-202ENST00000358808 LGALS9BQ3B8N2 356 aa8.01□□□□□ -1.13
CLIP1-202ENST00000358808 LGALS9CQ6DKI2 356 aa8.01□□□□□ -1.13
CLIP1-202ENST00000358808 SMAD5-AS1Q9Y6J3 95 aa8.01□□□□□ -1.13
CLIP1-202ENST00000358808 Q0VG73 95 aa8.01□□□□□ -1.13
CLIP1-202ENST00000358808 IGKV2-24A0A0C4DH68 120 aa8.01□□□□□ -1.13
CLIP1-202ENST00000358808 CFC1BP0CG36 223 aa8.01□□□□□ -1.13
CLIP1-202ENST00000358808 CFC1P0CG37 223 aa8.01□□□□□ -1.13
CLIP1-202ENST00000358808 IGKV1-6A0A0C4DH72 117 aa8□□□□□ -1.13
CLIP1-202ENST00000358808 H3BQ85 93 aa8□□□□□ -1.13
CLIP1-202ENST00000358808 PRR20EP86478 221 aa8□□□□□ -1.13
CLIP1-202ENST00000358808 PRR20CP86479 221 aa8□□□□□ -1.13
CLIP1-202ENST00000358808 PRR20DP86480 221 aa8□□□□□ -1.13
CLIP1-202ENST00000358808 PRR20BP86481 221 aa8□□□□□ -1.13
CLIP1-202ENST00000358808 PRR20AP86496 221 aa8□□□□□ -1.13
CLIP1-202ENST00000358808 Q6ZRM9 215 aa8□□□□□ -1.13
CLIP1-202ENST00000358808 KIAA1671Q9BY89 1806 aa8□□□□□ -1.13
CLIP1-202ENST00000358808 H3BMG7 143 aa8□□□□□ -1.13
CLIP1-202ENST00000358808 HIGD2BQ4VC39 106 aa8□□□□□ -1.13
CLIP1-202ENST00000358808 CYYR1Q96J86 154 aa8□□□□□ -1.13
CLIP1-202ENST00000358808 LY6G6EA0A0G2JKS1 128 aa8□□□□□ -1.13
CLIP1-202ENST00000358808 C17orf58Q2M2W7 97 aa8□□□□□ -1.13
CLIP1-202ENST00000358808 U3KQA8 63 aa8□□□□□ -1.13
CLIP1-202ENST00000358808 DAZ2Q13117 558 aaKnown RBP8□□□□□ -1.13
CLIP1-202ENST00000358808 DEFB135Q30KP9 77 aa8□□□□□ -1.13
CLIP1-202ENST00000358808 DAZ4Q86SG3 579 aaKnown RBP8□□□□□ -1.13
CLIP1-202ENST00000358808 DAZ3Q9NR90 486 aaKnown RBP8□□□□□ -1.13
CLIP1-202ENST00000358808 A0A1W2PPM0 123 aa7.99□□□□□ -1.13
CLIP1-202ENST00000358808 HHLA3Q9XRX5 114 aa7.99□□□□□ -1.13
CLIP1-202ENST00000358808 PLCE1Q9P212 2302 aa7.99□□□□□ -1.13
CLIP1-202ENST00000358808 WISP1O95388 367 aa7.99□□□□□ -1.13
CLIP1-202ENST00000358808 COX8AP10176 69 aa7.99□□□□□ -1.13
CLIP1-202ENST00000358808 QRFPP83859 136 aa7.99□□□□□ -1.13
CLIP1-202ENST00000358808 POLR3KQ9Y2Y1 108 aaPredicted RBP7.99□□□□□ -1.13
CLIP1-202ENST00000358808 IGLV3-9A0A075B6K5 115 aa7.99□□□□□ -1.13
CLIP1-202ENST00000358808 SPRY2O43597 315 aa7.98□□□□□ -1.13
CLIP1-202ENST00000358808 DIRC1Q969H9 104 aa7.98□□□□□ -1.13
CLIP1-202ENST00000358808 SPANXCQ9NY87 97 aa7.98□□□□□ -1.13
CLIP1-202ENST00000358808 IGHV2-5P01817 119 aa7.98□□□□□ -1.13
CLIP1-202ENST00000358808 C14orf177Q52M58 125 aa7.98□□□□□ -1.13
CLIP1-202ENST00000358808 DKK2Q9UBU2 259 aa7.98□□□□□ -1.13
CLIP1-202ENST00000358808 H0YGX0 51 aa7.98□□□□□ -1.13
CLIP1-202ENST00000358808 ASPHD1Q5U4P2 390 aa7.98□□□□□ -1.13
CLIP1-202ENST00000358808 ZNF493Q6ZR52 646 aa7.98□□□□□ -1.13
CLIP1-202ENST00000358808 PCNX1Q96RV3 2341 aa7.98□□□□□ -1.13
CLIP1-202ENST00000358808 DEFB125Q8N687 156 aa7.98□□□□□ -1.13
CLIP1-202ENST00000358808 PRSS47A8MTI9 375 aa7.98□□□□□ -1.13
CLIP1-202ENST00000358808 NDUFS7O75251 213 aa7.98□□□□□ -1.13
CLIP1-202ENST00000358808 DIAPH2-AS1Q14236 149 aa7.98□□□□□ -1.13
CLIP1-202ENST00000358808 KLK12Q9UKR0 248 aa7.98□□□□□ -1.13
CLIP1-202ENST00000358808 C12orf74Q32Q52 190 aa7.97□□□□□ -1.13
CLIP1-202ENST00000358808 Q6ZS49 121 aa7.97□□□□□ -1.13
CLIP1-202ENST00000358808 RNF152Q8N8N0 203 aa7.97□□□□□ -1.13
CLIP1-202ENST00000358808 SPTSSBQ8NFR3 76 aa7.97□□□□□ -1.13
CLIP1-202ENST00000358808 SMIM27A0A1W2PRY6 76 aa7.97□□□□□ -1.13
CLIP1-202ENST00000358808 SPAG11BQ08648 103 aa7.97□□□□□ -1.13
CLIP1-202ENST00000358808 KIR2DL5BQ8NHK3 375 aa7.97□□□□□ -1.13
CLIP1-202ENST00000358808 GBF1Q92538 1859 aa7.97□□□□□ -1.13
CLIP1-202ENST00000358808 K7EP13 123 aa7.96□□□□□ -1.13
CLIP1-202ENST00000358808 LINC01620Q4KN68 170 aa7.96□□□□□ -1.13
CLIP1-202ENST00000358808 LINC00311Q8N616 119 aa7.96□□□□□ -1.13
CLIP1-202ENST00000358808 A0A096LNI7 61 aa7.96□□□□□ -1.13
CLIP1-202ENST00000358808 TRBV12-3P01733 135 aa7.96□□□□□ -1.13
CLIP1-202ENST00000358808 LYL1P12980 280 aa7.96□□□□□ -1.13
CLIP1-202ENST00000358808 UBE2D1P51668 147 aa7.96□□□□□ -1.13
CLIP1-202ENST00000358808 TMEM61Q8N0U2 210 aa7.96□□□□□ -1.13
CLIP1-202ENST00000358808 WFDC11Q8NEX6 87 aa7.96□□□□□ -1.13
CLIP1-202ENST00000358808 A0A0B4J2C4 111 aa7.96□□□□□ -1.14
CLIP1-202ENST00000358808 FOXL2NBQ6ZUU3 175 aa7.96□□□□□ -1.14
CLIP1-202ENST00000358808 K7EM74 188 aa7.96□□□□□ -1.14
CLIP1-202ENST00000358808 IGHV4-38-2P0DP08 117 aa7.96□□□□□ -1.14
CLIP1-202ENST00000358808 WT1-ASQ06250 92 aa7.96□□□□□ -1.14
CLIP1-202ENST00000358808 PTPRDP23468 1912 aa7.96□□□□□ -1.14
CLIP1-202ENST00000358808 ZFP36P26651 326 aaKnown RBP7.96□□□□□ -1.14
CLIP1-202ENST00000358808 HIGD2AQ9BW72 106 aa7.96□□□□□ -1.14
CLIP1-202ENST00000358808 NPSP0C0P6 89 aa7.95□□□□□ -1.14
CLIP1-202ENST00000358808 Q6ZR03 302 aa7.95□□□□□ -1.14
CLIP1-202ENST00000358808 IGHV4-30-2A0A087WSY4 118 aa7.95□□□□□ -1.14
CLIP1-202ENST00000358808 IGLC1P0CG04 106 aa7.95□□□□□ -1.14
CLIP1-202ENST00000358808 A0A087WZ39 114 aa7.94□□□□□ -1.14
CLIP1-202ENST00000358808 USP17L23D6RBM5 183 aa7.94□□□□□ -1.14
CLIP1-202ENST00000358808 C11orf45Q8TAV5 145 aa7.94□□□□□ -1.14
CLIP1-202ENST00000358808 FAM110AQ9BQ89 295 aa7.94□□□□□ -1.14
CLIP1-202ENST00000358808 DOCK8Q8NF50 2099 aa7.94□□□□□ -1.14
CLIP1-202ENST00000358808 C20orf144Q9BQM9 153 aa7.94□□□□□ -1.14
CLIP1-202ENST00000358808 V9GYV3 84 aa7.94□□□□□ -1.14
CLIP1-202ENST00000358808 HELZP42694 1942 aaKnown RBP7.94□□□□□ -1.14
CLIP1-202ENST00000358808 IL15RAQ13261 267 aa7.94□□□□□ -1.14
CLIP1-202ENST00000358808 C11orf52Q96A22 123 aa7.94□□□□□ -1.14
CLIP1-202ENST00000358808 RPL39LQ96EH5 51 aaKnown RBP7.94□□□□□ -1.14
CLIP1-202ENST00000358808 AGPAT4-IT1Q9H0P7 198 aa7.94□□□□□ -1.14
CLIP1-202ENST00000358808 SS18L2Q9UHA2 77 aa7.94□□□□□ -1.14
CLIP1-202ENST00000358808 UBE2D4Q9Y2X8 147 aa7.94□□□□□ -1.14
CLIP1-202ENST00000358808 CTSGP08311 255 aa7.94□□□□□ -1.14
CLIP1-202ENST00000358808 DAND5Q8N907 189 aa7.94□□□□□ -1.14
CLIP1-202ENST00000358808 FXYD5Q96DB9 178 aa7.94□□□□□ -1.14
CLIP1-202ENST00000358808 FAM231DQ6ZW35 169 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms