RNA–Protein interactions for RNA: ENST00000357250.10

COL9A1-202, Transcript of collagen type IX alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A1, Length 4,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-202ENST00000357250 KIR2DL5BA0A0G2JN68 375 aa9.21□□□□□ -0.93
COL9A1-202ENST00000357250 KIR2DL5BA0A0G2JPC4 375 aa9.21□□□□□ -0.93
COL9A1-202ENST00000357250 EGR2P11161 476 aaPredicted RBP9.21□□□□□ -0.93
COL9A1-202ENST00000357250 KIR2DL5AQ8N109 375 aa9.21□□□□□ -0.93
COL9A1-202ENST00000357250 DYNAPQ8N1N2 210 aa9.21□□□□□ -0.93
COL9A1-202ENST00000357250 FGF6P10767 208 aa9.21□□□□□ -0.93
COL9A1-202ENST00000357250 TRAV26-2A0A0B4J265 109 aa9.21□□□□□ -0.94
COL9A1-202ENST00000357250 GAGE7O76087 117 aa9.21□□□□□ -0.94
COL9A1-202ENST00000357250 GAGE12FP0CL80 117 aa9.21□□□□□ -0.94
COL9A1-202ENST00000357250 GAGE12GP0CL81 117 aa9.21□□□□□ -0.94
COL9A1-202ENST00000357250 GAGE12IP0CL82 117 aa9.21□□□□□ -0.94
COL9A1-202ENST00000357250 ZNF48Q96MX3 618 aaPredicted RBP9.21□□□□□ -0.94
COL9A1-202ENST00000357250 K7EIM0 57 aa9.21□□□□□ -0.94
COL9A1-202ENST00000357250 IGKV1-17P01599 117 aa9.2□□□□□ -0.94
COL9A1-202ENST00000357250 FAM120AOSQ5T036 256 aa9.2□□□□□ -0.94
COL9A1-202ENST00000357250 UBL5Q9BZL1 73 aa9.2□□□□□ -0.94
COL9A1-202ENST00000357250 TRAV12-2A0A075B6T6 113 aa9.2□□□□□ -0.94
COL9A1-202ENST00000357250 TRBV6-1A0A0K0K1D8 114 aa9.2□□□□□ -0.94
COL9A1-202ENST00000357250 ZNF625Q96I27 306 aaPredicted RBP9.2□□□□□ -0.94
COL9A1-202ENST00000357250 IGHV3-16A0A0C4DH30 117 aa9.2□□□□□ -0.94
COL9A1-202ENST00000357250 RPL32P62910 135 aaKnown RBP9.2□□□□□ -0.94
COL9A1-202ENST00000357250 HERV-K104P63124 156 aa9.2□□□□□ -0.94
COL9A1-202ENST00000357250 DEFB121Q5J5C9 76 aa9.2□□□□□ -0.94
COL9A1-202ENST00000357250 IGHV7-81A0A0B4J1V7 117 aa9.19□□□□□ -0.94
COL9A1-202ENST00000357250 TMEM89A2RUT3 159 aa9.19□□□□□ -0.94
COL9A1-202ENST00000357250 ARHGAP21Q5T5U3 1957 aa9.19□□□□□ -0.94
COL9A1-202ENST00000357250 TMEM131Q92545 1883 aa9.19□□□□□ -0.94
COL9A1-202ENST00000357250 PRSS47A8MTI9 375 aa9.19□□□□□ -0.94
COL9A1-202ENST00000357250 IFITM1P13164 125 aa9.19□□□□□ -0.94
COL9A1-202ENST00000357250 TSSC4Q9Y5U2 329 aaPredicted RBP9.19□□□□□ -0.94
COL9A1-202ENST00000357250 USP9XQ93008 2570 aaPredicted RBP9.19□□□□□ -0.94
COL9A1-202ENST00000357250 PRSS29PA6NIE9 313 aa9.19□□□□□ -0.94
COL9A1-202ENST00000357250 ETDBQ3ZM63 59 aa9.19□□□□□ -0.94
COL9A1-202ENST00000357250 MED14OSP0DP75 135 aa9.19□□□□□ -0.94
COL9A1-202ENST00000357250 SPANXCQ9NY87 97 aa9.19□□□□□ -0.94
COL9A1-202ENST00000357250 PLXNB1O43157 2135 aa9.18□□□□□ -0.94
COL9A1-202ENST00000357250 J3QKU1 62 aa9.18□□□□□ -0.94
COL9A1-202ENST00000357250 CRYGCP07315 174 aa9.18□□□□□ -0.94
COL9A1-202ENST00000357250 NKAPP1Q8N9T2 125 aa9.18□□□□□ -0.94
COL9A1-202ENST00000357250 C2CD3Q4AC94 2353 aa9.18□□□□□ -0.94
COL9A1-202ENST00000357250 Q6ZVH6 145 aa9.18□□□□□ -0.94
COL9A1-202ENST00000357250 K7EMT4 169 aa9.18□□□□□ -0.94
COL9A1-202ENST00000357250 HOXD3P31249 432 aaPredicted RBP9.18□□□□□ -0.94
COL9A1-202ENST00000357250 C17orf77Q96MU5 243 aa9.18□□□□□ -0.94
COL9A1-202ENST00000357250 PFN2P35080 140 aa9.17□□□□□ -0.94
COL9A1-202ENST00000357250 GAGE6Q13070 117 aa9.17□□□□□ -0.94
COL9A1-202ENST00000357250 CFHR4Q92496 578 aa9.17□□□□□ -0.94
COL9A1-202ENST00000357250 IGF2BP2-AS1Q96M15 143 aa9.17□□□□□ -0.94
COL9A1-202ENST00000357250 TEX48A0A1B0GUV7 120 aa9.17□□□□□ -0.94
COL9A1-202ENST00000357250 C12orf74Q32Q52 190 aa9.17□□□□□ -0.94
COL9A1-202ENST00000357250 C16orf54Q6UWD8 224 aa9.17□□□□□ -0.94
COL9A1-202ENST00000357250 SEM1Q6ZVN7 128 aa9.17□□□□□ -0.94
COL9A1-202ENST00000357250 CITED1Q99966 193 aa9.17□□□□□ -0.94
COL9A1-202ENST00000357250 CTSGP08311 255 aa9.17□□□□□ -0.94
COL9A1-202ENST00000357250 DKK2Q9UBU2 259 aa9.17□□□□□ -0.94
COL9A1-202ENST00000357250 BUB3O43684 328 aa9.17□□□□□ -0.94
COL9A1-202ENST00000357250 DEFB112Q30KQ8 113 aa9.17□□□□□ -0.94
COL9A1-202ENST00000357250 PATE2Q6UY27 113 aa9.17□□□□□ -0.94
COL9A1-202ENST00000357250 FBXL19-AS1Q494R0 122 aa9.16□□□□□ -0.94
COL9A1-202ENST00000357250 DEFB125Q8N687 156 aa9.16□□□□□ -0.94
COL9A1-202ENST00000357250 FAM167A-AS1Q96KT0 104 aa9.16□□□□□ -0.94
COL9A1-202ENST00000357250 EDA2RQ9HAV5 297 aa9.16□□□□□ -0.94
COL9A1-202ENST00000357250 WI2-2373I1.2A0A1W2PRP0 233 aa9.16□□□□□ -0.94
COL9A1-202ENST00000357250 IGLV1-47P01700 117 aa9.16□□□□□ -0.94
COL9A1-202ENST00000357250 DAZAP2Q15038 168 aaPredicted RBP9.16□□□□□ -0.94
COL9A1-202ENST00000357250 SH2D6Q7Z4S9 175 aa9.16□□□□□ -0.94
COL9A1-202ENST00000357250 PKIGQ9Y2B9 76 aa9.16□□□□□ -0.94
COL9A1-202ENST00000357250 CFC1BP0CG36 223 aa9.16□□□□□ -0.94
COL9A1-202ENST00000357250 CFC1P0CG37 223 aa9.16□□□□□ -0.94
COL9A1-202ENST00000357250 IGHG4P01861 327 aa9.15□□□□□ -0.94
COL9A1-202ENST00000357250 RBMY1FQ15415 496 aaKnown RBP9.15□□□□□ -0.94
COL9A1-202ENST00000357250 JMJD1CQ15652 2540 aa9.15□□□□□ -0.94
COL9A1-202ENST00000357250 CFHR3Q02985 330 aa9.15□□□□□ -0.95
COL9A1-202ENST00000357250 SLC25A29Q8N8R3 303 aa9.15□□□□□ -0.95
COL9A1-202ENST00000357250 IGHV3-38A0A0C4DH36 116 aa9.15□□□□□ -0.95
COL9A1-202ENST00000357250 ALPK3Q96L96 1907 aa9.14□□□□□ -0.95
COL9A1-202ENST00000357250 IGHV4-59P01825 116 aa9.14□□□□□ -0.95
COL9A1-202ENST00000357250 NPSP0C0P6 89 aa9.14□□□□□ -0.95
COL9A1-202ENST00000357250 MSMPQ1L6U9 139 aa9.14□□□□□ -0.95
COL9A1-202ENST00000357250 C9orf47Q6ZRZ4 202 aa9.14□□□□□ -0.95
COL9A1-202ENST00000357250 Q8N9W7 124 aa9.14□□□□□ -0.95
COL9A1-202ENST00000357250 GNRH2O43555 120 aa9.14□□□□□ -0.95
COL9A1-202ENST00000357250 PRB1P04280 392 aa9.14□□□□□ -0.95
COL9A1-202ENST00000357250 CARD19Q96LW7 228 aa9.14□□□□□ -0.95
COL9A1-202ENST00000357250 U3KQE9 123 aa9.14□□□□□ -0.95
COL9A1-202ENST00000357250 MUC22E2RYF6 1773 aaPredicted RBP9.14□□□□□ -0.95
COL9A1-202ENST00000357250 CEP192Q8TEP8 1941 aa9.14□□□□□ -0.95
COL9A1-202ENST00000357250 TRAV12-1A0A0B4J245 112 aa9.14□□□□□ -0.95
COL9A1-202ENST00000357250 TMEM126AQ9H061 195 aa9.14□□□□□ -0.95
COL9A1-202ENST00000357250 CCL24O00175 119 aa9.13□□□□□ -0.95
COL9A1-202ENST00000357250 ACYP1P07311 99 aa9.13□□□□□ -0.95
COL9A1-202ENST00000357250 C9orf153Q5TBE3 101 aa9.13□□□□□ -0.95
COL9A1-202ENST00000357250 HIGD1BQ9P298 99 aa9.13□□□□□ -0.95
COL9A1-202ENST00000357250 TRAV25A0A0B4J276 109 aa9.13□□□□□ -0.95
COL9A1-202ENST00000357250 MORN5Q5VZ52 161 aa9.13□□□□□ -0.95
COL9A1-202ENST00000357250 SCRT2Q9NQ03 307 aa9.13□□□□□ -0.95
COL9A1-202ENST00000357250 C10orf105Q8TEF2 133 aa9.13□□□□□ -0.95
COL9A1-202ENST00000357250 NAV3Q8IVL0 2385 aa9.13□□□□□ -0.95
COL9A1-202ENST00000357250 IGLV2-23P01705 113 aa9.13□□□□□ -0.95
COL9A1-202ENST00000357250 CTRLP40313 264 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms