RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 IGKV3D-20A0A0C4DH25 116 aa10.91□□□□□ -0.66
TSPAN4-201ENST00000346501 SCO2A0A1W2PP80 73 aa10.91□□□□□ -0.66
TSPAN4-201ENST00000346501 A0A1W2PPQ1 181 aa10.91□□□□□ -0.66
TSPAN4-201ENST00000346501 A8MWV9 139 aa10.91□□□□□ -0.66
TSPAN4-201ENST00000346501 PIK3CD-AS1Q5SR53 167 aa10.91□□□□□ -0.66
TSPAN4-201ENST00000346501 C6orf223Q8N319 242 aa10.91□□□□□ -0.66
TSPAN4-201ENST00000346501 NHLRC2Q8NBF2 726 aa10.91□□□□□ -0.66
TSPAN4-201ENST00000346501 IL36BQ9NZH7 164 aa10.91□□□□□ -0.66
TSPAN4-201ENST00000346501 SIVA1O15304 175 aa10.9□□□□□ -0.66
TSPAN4-201ENST00000346501 RS1O15537 224 aa10.9□□□□□ -0.66
TSPAN4-201ENST00000346501 RNASE3P12724 160 aaKnown RBP10.9□□□□□ -0.66
TSPAN4-201ENST00000346501 TAGLN2P37802 199 aaKnown RBP10.9□□□□□ -0.66
TSPAN4-201ENST00000346501 RHOHQ15669 191 aa10.9□□□□□ -0.66
TSPAN4-201ENST00000346501 ZNF506Q5JVG8 444 aa10.9□□□□□ -0.66
TSPAN4-201ENST00000346501 PHLDA3Q9Y5J5 127 aa10.9□□□□□ -0.66
TSPAN4-201ENST00000346501 TRAV9-2A0A087WT02 112 aa10.89□□□□□ -0.67
TSPAN4-201ENST00000346501 PGPEP1LA6NFU8 196 aa10.89□□□□□ -0.67
TSPAN4-201ENST00000346501 KRBOX1C9JBD0 128 aa10.89□□□□□ -0.67
TSPAN4-201ENST00000346501 H3BVH4 76 aa10.89□□□□□ -0.67
TSPAN4-201ENST00000346501 K7EQD1 137 aa10.89□□□□□ -0.67
TSPAN4-201ENST00000346501 RTL8CO15255 209 aa10.89□□□□□ -0.67
TSPAN4-201ENST00000346501 MGST1P10620 155 aaKnown RBP10.89□□□□□ -0.67
TSPAN4-201ENST00000346501 GATA1P15976 413 aaPredicted RBP10.89□□□□□ -0.67
TSPAN4-201ENST00000346501 ZNF674Q2M3X9 581 aa10.89□□□□□ -0.67
TSPAN4-201ENST00000346501 CFAP126Q5VTH2 177 aa10.89□□□□□ -0.67
TSPAN4-201ENST00000346501 BOLA1Q9Y3E2 137 aa10.89□□□□□ -0.67
TSPAN4-201ENST00000346501 VPS13DQ5THJ4 4388 aa10.88□□□□□ -0.67
TSPAN4-201ENST00000346501 TRBV6-4A0A1B0GX49 114 aa10.88□□□□□ -0.67
TSPAN4-201ENST00000346501 PDE6DO43924 150 aa10.88□□□□□ -0.67
TSPAN4-201ENST00000346501 NXPH4O95158 308 aa10.88□□□□□ -0.67
TSPAN4-201ENST00000346501 BTF3P20290 206 aaKnown RBP10.88□□□□□ -0.67
TSPAN4-201ENST00000346501 LINC01559Q495D7 138 aa10.88□□□□□ -0.67
TSPAN4-201ENST00000346501 DNLZQ5SXM8 178 aa10.88□□□□□ -0.67
TSPAN4-201ENST00000346501 LYPD5Q6UWN5 251 aa10.88□□□□□ -0.67
TSPAN4-201ENST00000346501 TMSB15BA0A087X1C1 80 aa10.87□□□□□ -0.67
TSPAN4-201ENST00000346501 IGHV3-73A0A0B4J1V6 119 aa10.87□□□□□ -0.67
TSPAN4-201ENST00000346501 GRIFINA4D1Z8 144 aa10.87□□□□□ -0.67
TSPAN4-201ENST00000346501 RHODO00212 210 aa10.87□□□□□ -0.67
TSPAN4-201ENST00000346501 ARMS2P0C7Q2 107 aa10.87□□□□□ -0.67
TSPAN4-201ENST00000346501 CRIP1P50238 77 aa10.87□□□□□ -0.67
TSPAN4-201ENST00000346501 ZFP2Q6ZN57 461 aa10.87□□□□□ -0.67
TSPAN4-201ENST00000346501 KMT2AQ03164 3969 aa10.86□□□□□ -0.67
TSPAN4-201ENST00000346501 RPL35P42766 123 aaKnown RBP10.86□□□□□ -0.67
TSPAN4-201ENST00000346501 BLOC1S1P78537 153 aa10.86□□□□□ -0.67
TSPAN4-201ENST00000346501 CCL20P78556 96 aa10.86□□□□□ -0.67
TSPAN4-201ENST00000346501 MEF2BQ02080 365 aaPredicted RBP10.86□□□□□ -0.67
TSPAN4-201ENST00000346501 PRR27Q6MZM9 219 aa10.86□□□□□ -0.67
TSPAN4-201ENST00000346501 ZFP82Q8N141 532 aa10.86□□□□□ -0.67
TSPAN4-201ENST00000346501 C9orf62Q8N4C0 152 aa10.86□□□□□ -0.67
TSPAN4-201ENST00000346501 SLC25A29Q8N8R3 303 aa10.86□□□□□ -0.67
TSPAN4-201ENST00000346501 DAZAP1Q96EP5 407 aaKnown RBP10.86□□□□□ -0.67
TSPAN4-201ENST00000346501 BIN3Q9NQY0 253 aa10.86□□□□□ -0.67
TSPAN4-201ENST00000346501 K7EP13 123 aa10.85□□□□□ -0.67
TSPAN4-201ENST00000346501 C11orf52Q96A22 123 aa10.85□□□□□ -0.67
TSPAN4-201ENST00000346501 PARLQ9H300 379 aa10.85□□□□□ -0.67
TSPAN4-201ENST00000346501 VAX2Q9UIW0 290 aa10.85□□□□□ -0.67
TSPAN4-201ENST00000346501 LY96Q9Y6Y9 160 aa10.85□□□□□ -0.67
TSPAN4-201ENST00000346501 M0R381 172 aa10.84□□□□□ -0.67
TSPAN4-201ENST00000346501 BCL2P10415 239 aa10.84□□□□□ -0.67
TSPAN4-201ENST00000346501 EVI2AP22794 236 aa10.84□□□□□ -0.67
TSPAN4-201ENST00000346501 GNG4P50150 75 aa10.84□□□□□ -0.67
TSPAN4-201ENST00000346501 SMIM12Q96EX1 92 aa10.84□□□□□ -0.67
TSPAN4-201ENST00000346501 MLST8Q9BVC4 326 aa10.84□□□□□ -0.67
TSPAN4-201ENST00000346501 MED9Q9NWA0 146 aa10.84□□□□□ -0.67
TSPAN4-201ENST00000346501 TRAV8-6A0A0B4J262 113 aa10.83□□□□□ -0.68
TSPAN4-201ENST00000346501 CXCL1P09341 107 aa10.83□□□□□ -0.68
TSPAN4-201ENST00000346501 MED14OSP0DP75 135 aa10.83□□□□□ -0.68
TSPAN4-201ENST00000346501 DMRTA1Q5VZB9 504 aa10.83□□□□□ -0.68
TSPAN4-201ENST00000346501 LOC100131303A0A0U1RQF7 123 aa10.82□□□□□ -0.68
TSPAN4-201ENST00000346501 XKRY2A2RUG3 117 aa10.82□□□□□ -0.68
TSPAN4-201ENST00000346501 TIRAPP58753 221 aa10.82□□□□□ -0.68
TSPAN4-201ENST00000346501 CENPWQ5EE01 88 aa10.82□□□□□ -0.68
TSPAN4-201ENST00000346501 FAM74A4Q5TZK3 123 aa10.82□□□□□ -0.68
TSPAN4-201ENST00000346501 ALKAL2Q6UX46 152 aa10.82□□□□□ -0.68
TSPAN4-201ENST00000346501 ATP6V0E2Q8NHE4 81 aa10.82□□□□□ -0.68
TSPAN4-201ENST00000346501 RPS20P60866 119 aaKnown RBP10.81□□□□□ -0.68
TSPAN4-201ENST00000346501 SPANXN1Q5VSR9 72 aa10.81□□□□□ -0.68
TSPAN4-201ENST00000346501 NFE4Q86UQ8 179 aa10.81□□□□□ -0.68
TSPAN4-201ENST00000346501 C10orf126Q8N4M7 172 aa10.81□□□□□ -0.68
TSPAN4-201ENST00000346501 DERL1Q9BUN8 251 aa10.81□□□□□ -0.68
TSPAN4-201ENST00000346501 OR10J3Q5JRS4 329 aa10.8□□□□□ -0.68
TSPAN4-201ENST00000346501 SFRP2Q96HF1 295 aa10.8□□□□□ -0.68
TSPAN4-201ENST00000346501 SCRT2Q9NQ03 307 aa10.8□□□□□ -0.68
TSPAN4-201ENST00000346501 DNAH6Q9C0G6 4158 aa10.8□□□□□ -0.68
TSPAN4-201ENST00000346501 RPL19P84098 196 aaKnown RBP10.79□□□□□ -0.68
TSPAN4-201ENST00000346501 GTSF1LQ9H1H1 148 aa10.79□□□□□ -0.68
TSPAN4-201ENST00000346501 A0A087WWL8 130 aa10.78□□□□□ -0.68
TSPAN4-201ENST00000346501 IGHV3-38A0A0C4DH36 116 aa10.78□□□□□ -0.68
TSPAN4-201ENST00000346501 A0A1B0GVY2 172 aa10.78□□□□□ -0.68
TSPAN4-201ENST00000346501 GAGE12JA6NER3 117 aa10.78□□□□□ -0.68
TSPAN4-201ENST00000346501 EREGO14944 169 aa10.78□□□□□ -0.68
TSPAN4-201ENST00000346501 P01737 135 aa10.78□□□□□ -0.68
TSPAN4-201ENST00000346501 SMIM17P0DL12 118 aa10.78□□□□□ -0.68
TSPAN4-201ENST00000346501 TNP2Q05952 138 aa10.78□□□□□ -0.68
TSPAN4-201ENST00000346501 GAGE1Q13065 139 aa10.78□□□□□ -0.68
TSPAN4-201ENST00000346501 GAGE4Q13068 117 aa10.78□□□□□ -0.68
TSPAN4-201ENST00000346501 GAGE5Q13069 117 aa10.78□□□□□ -0.68
TSPAN4-201ENST00000346501 GAGE13Q4V321 117 aa10.78□□□□□ -0.68
TSPAN4-201ENST00000346501 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.78□□□□□ -0.68
TSPAN4-201ENST00000346501 OR2D3Q8NGH3 330 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms