RNA–Protein interactions for RNA: ENST00000332345.10

LIMS1-201, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS1, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-201ENST00000332345 ZNF479Q96JC4 524 aa9.77□□□□□ -0.85
LIMS1-201ENST00000332345 C9orf85Q96MD7 179 aa9.77□□□□□ -0.85
LIMS1-201ENST00000332345 MLST8Q9BVC4 326 aa9.77□□□□□ -0.85
LIMS1-201ENST00000332345 M0R036 132 aa9.76□□□□□ -0.85
LIMS1-201ENST00000332345 SFTA3P0C7M3 94 aa9.76□□□□□ -0.85
LIMS1-201ENST00000332345 CRYBA4P53673 196 aa9.76□□□□□ -0.85
LIMS1-201ENST00000332345 DNLZQ5SXM8 178 aa9.76□□□□□ -0.85
LIMS1-201ENST00000332345 MED9Q9NWA0 146 aa9.76□□□□□ -0.85
LIMS1-201ENST00000332345 IL36BQ9NZH7 164 aa9.76□□□□□ -0.85
LIMS1-201ENST00000332345 PGPEP1LA6NFU8 196 aa9.75□□□□□ -0.85
LIMS1-201ENST00000332345 PIK3CD-AS1Q5SR53 167 aa9.75□□□□□ -0.85
LIMS1-201ENST00000332345 LINC00528Q8N1L1 170 aa9.75□□□□□ -0.85
LIMS1-201ENST00000332345 ICOSQ9Y6W8 199 aa9.75□□□□□ -0.85
LIMS1-201ENST00000332345 ARMS2P0C7Q2 107 aa9.74□□□□□ -0.85
LIMS1-201ENST00000332345 MRPL23Q16540 153 aaKnown RBP9.74□□□□□ -0.85
LIMS1-201ENST00000332345 ZNF506Q5JVG8 444 aa9.74□□□□□ -0.85
LIMS1-201ENST00000332345 LYPD6BQ8NI32 183 aa9.74□□□□□ -0.85
LIMS1-201ENST00000332345 DERL1Q9BUN8 251 aa9.74□□□□□ -0.85
LIMS1-201ENST00000332345 TMSB15BA0A087X1C1 80 aa9.73□□□□□ -0.85
LIMS1-201ENST00000332345 A0A096LPF7 62 aa9.73□□□□□ -0.85
LIMS1-201ENST00000332345 GRIFINA4D1Z8 144 aa9.73□□□□□ -0.85
LIMS1-201ENST00000332345 RBFOX3A6NFN3 312 aa9.73□□□□□ -0.85
LIMS1-201ENST00000332345 RS1O15537 224 aa9.73□□□□□ -0.85
LIMS1-201ENST00000332345 GNG4P50150 75 aa9.73□□□□□ -0.85
LIMS1-201ENST00000332345 CENPWQ5EE01 88 aa9.73□□□□□ -0.85
LIMS1-201ENST00000332345 CFAP126Q5VTH2 177 aa9.73□□□□□ -0.85
LIMS1-201ENST00000332345 SYT8Q8NBV8 401 aa9.73□□□□□ -0.85
LIMS1-201ENST00000332345 DAZAP1Q96EP5 407 aaKnown RBP9.73□□□□□ -0.85
LIMS1-201ENST00000332345 SMIM12Q96EX1 92 aa9.73□□□□□ -0.85
LIMS1-201ENST00000332345 LINC00588Q9Y4M8 146 aa9.73□□□□□ -0.85
LIMS1-201ENST00000332345 DNAH6Q9C0G6 4158 aa9.73□□□□□ -0.85
LIMS1-201ENST00000332345 RAB19A4D1S5 217 aa9.72□□□□□ -0.85
LIMS1-201ENST00000332345 A8MWV9 139 aa9.72□□□□□ -0.85
LIMS1-201ENST00000332345 H3BVH4 76 aa9.72□□□□□ -0.85
LIMS1-201ENST00000332345 LCE2BO14633 110 aa9.72□□□□□ -0.85
LIMS1-201ENST00000332345 ESRGQ1W209 222 aa9.72□□□□□ -0.85
LIMS1-201ENST00000332345 PRR27Q6MZM9 219 aa9.72□□□□□ -0.85
LIMS1-201ENST00000332345 PCNPQ8WW12 178 aaKnown RBP9.72□□□□□ -0.85
LIMS1-201ENST00000332345 BIN3Q9NQY0 253 aa9.72□□□□□ -0.85
LIMS1-201ENST00000332345 PHLDA3Q9Y5J5 127 aa9.72□□□□□ -0.85
LIMS1-201ENST00000332345 IGLV2-18A0A075B6J9 118 aa9.71□□□□□ -0.86
LIMS1-201ENST00000332345 M0R2N4 97 aa9.71□□□□□ -0.86
LIMS1-201ENST00000332345 MGST1P10620 155 aaKnown RBP9.71□□□□□ -0.86
LIMS1-201ENST00000332345 GATA1P15976 413 aaPredicted RBP9.71□□□□□ -0.86
LIMS1-201ENST00000332345 ZNF575Q86XF7 245 aa9.71□□□□□ -0.86
LIMS1-201ENST00000332345 ZNRF2Q8NHG8 242 aa9.71□□□□□ -0.86
LIMS1-201ENST00000332345 K7EQD1 137 aa9.7□□□□□ -0.86
LIMS1-201ENST00000332345 CXCL1P09341 107 aa9.7□□□□□ -0.86
LIMS1-201ENST00000332345 GYPEP15421 78 aa9.7□□□□□ -0.86
LIMS1-201ENST00000332345 SRIP30626 198 aa9.7□□□□□ -0.86
LIMS1-201ENST00000332345 ZFP2Q6ZN57 461 aa9.7□□□□□ -0.86
LIMS1-201ENST00000332345 NEGR1Q7Z3B1 354 aa9.7□□□□□ -0.86
LIMS1-201ENST00000332345 SH2D6Q7Z4S9 175 aa9.7□□□□□ -0.86
LIMS1-201ENST00000332345 PRADC1Q9BSG0 188 aa9.7□□□□□ -0.86
LIMS1-201ENST00000332345 EIF5A2Q9GZV4 153 aaKnown RBP9.7□□□□□ -0.86
LIMS1-201ENST00000332345 SCRT2Q9NQ03 307 aa9.7□□□□□ -0.86
LIMS1-201ENST00000332345 TRBV6-4A0A1B0GX49 114 aa9.69□□□□□ -0.86
LIMS1-201ENST00000332345 TMEM250H0YL14 139 aa9.69□□□□□ -0.86
LIMS1-201ENST00000332345 IGLV2-8P01709 118 aa9.69□□□□□ -0.86
LIMS1-201ENST00000332345 MED14OSP0DP75 135 aa9.69□□□□□ -0.86
LIMS1-201ENST00000332345 TEX261Q6UWH6 196 aa9.69□□□□□ -0.86
LIMS1-201ENST00000332345 ZFP82Q8N141 532 aa9.69□□□□□ -0.86
LIMS1-201ENST00000332345 Q9H8V8 135 aa9.69□□□□□ -0.86
LIMS1-201ENST00000332345 MRPS16Q9Y3D3 137 aaKnown RBP9.69□□□□□ -0.86
LIMS1-201ENST00000332345 IGHV3-73A0A0B4J1V6 119 aa9.68□□□□□ -0.86
LIMS1-201ENST00000332345 M0R381 172 aa9.68□□□□□ -0.86
LIMS1-201ENST00000332345 RPS20P60866 119 aaKnown RBP9.68□□□□□ -0.86
LIMS1-201ENST00000332345 RPL19P84098 196 aaKnown RBP9.68□□□□□ -0.86
LIMS1-201ENST00000332345 LYPD5Q6UWN5 251 aa9.68□□□□□ -0.86
LIMS1-201ENST00000332345 SLC25A29Q8N8R3 303 aa9.68□□□□□ -0.86
LIMS1-201ENST00000332345 UPK3BQ9BT76 320 aa9.68□□□□□ -0.86
LIMS1-201ENST00000332345 PARLQ9H300 379 aa9.68□□□□□ -0.86
LIMS1-201ENST00000332345 TRBV20OR9-2A0A075B6H5 130 aa9.67□□□□□ -0.86
LIMS1-201ENST00000332345 XKRY2A2RUG3 117 aa9.67□□□□□ -0.86
LIMS1-201ENST00000332345 RHODO00212 210 aa9.67□□□□□ -0.86
LIMS1-201ENST00000332345 NDUFS6O75380 124 aaKnown RBP9.67□□□□□ -0.86
LIMS1-201ENST00000332345 RHOHQ15669 191 aa9.67□□□□□ -0.86
LIMS1-201ENST00000332345 Q6ZR54 194 aa9.67□□□□□ -0.86
LIMS1-201ENST00000332345 SFRP2Q96HF1 295 aa9.67□□□□□ -0.86
LIMS1-201ENST00000332345 FAM210AQ96ND0 272 aa9.67□□□□□ -0.86
LIMS1-201ENST00000332345 NBDYA0A0U1RRE5 68 aa9.66□□□□□ -0.86
LIMS1-201ENST00000332345 C19orf71A6NCJ1 209 aa9.66□□□□□ -0.86
LIMS1-201ENST00000332345 P01737 135 aa9.66□□□□□ -0.86
LIMS1-201ENST00000332345 OR5AL1P0C617 328 aa9.66□□□□□ -0.86
LIMS1-201ENST00000332345 TOR2AQ5JU69 321 aa9.66□□□□□ -0.86
LIMS1-201ENST00000332345 SOHLH1Q5JUK2 328 aa9.66□□□□□ -0.86
LIMS1-201ENST00000332345 OR2D3Q8NGH3 330 aa9.66□□□□□ -0.86
LIMS1-201ENST00000332345 SSBP4Q9BWG4 385 aaPredicted RBP9.66□□□□□ -0.86
LIMS1-201ENST00000332345 JPT2Q9H910 190 aa9.66□□□□□ -0.86
LIMS1-201ENST00000332345 SNAI2O43623 268 aa9.65□□□□□ -0.86
LIMS1-201ENST00000332345 CEBPGP53567 150 aa9.65□□□□□ -0.86
LIMS1-201ENST00000332345 SPANXN1Q5VSR9 72 aa9.65□□□□□ -0.86
LIMS1-201ENST00000332345 UFSP1Q6NVU6 142 aa9.65□□□□□ -0.86
LIMS1-201ENST00000332345 LINC00336Q6ZUF6 198 aa9.65□□□□□ -0.86
LIMS1-201ENST00000332345 OCC1Q8TAD7 63 aa9.65□□□□□ -0.86
LIMS1-201ENST00000332345 SAMD10Q9BYL1 202 aa9.65□□□□□ -0.86
LIMS1-201ENST00000332345 LOC100131303A0A0U1RQF7 123 aa9.64□□□□□ -0.87
LIMS1-201ENST00000332345 TTC32Q5I0X7 151 aa9.64□□□□□ -0.87
LIMS1-201ENST00000332345 C1orf134Q5TEV5 83 aa9.64□□□□□ -0.87
LIMS1-201ENST00000332345 A0A087WWL8 130 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 108.9 ms