RNA–Protein interactions for RNA: ENST00000330494.11

CHD3-201, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CHD3, Length 7,328 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-201ENST00000330494 ANKRD29Q8N6D5 301 aa7.95□□□□□ -1.14
CHD3-201ENST00000330494 CRYBA4P53673 196 aa7.95□□□□□ -1.14
CHD3-201ENST00000330494 IGHV4OR15-8A0A075B7B6 117 aa7.95□□□□□ -1.14
CHD3-201ENST00000330494 A0A087WW49 117 aa7.95□□□□□ -1.14
CHD3-201ENST00000330494 E7EUB6 86 aa7.95□□□□□ -1.14
CHD3-201ENST00000330494 PRR20EP86478 221 aa7.95□□□□□ -1.14
CHD3-201ENST00000330494 PRR20CP86479 221 aa7.95□□□□□ -1.14
CHD3-201ENST00000330494 PRR20DP86480 221 aa7.95□□□□□ -1.14
CHD3-201ENST00000330494 PRR20BP86481 221 aa7.95□□□□□ -1.14
CHD3-201ENST00000330494 PRR20AP86496 221 aa7.95□□□□□ -1.14
CHD3-201ENST00000330494 MRPL23Q16540 153 aaKnown RBP7.95□□□□□ -1.14
CHD3-201ENST00000330494 AGPAT4-IT1Q9H0P7 198 aa7.95□□□□□ -1.14
CHD3-201ENST00000330494 XCL1P47992 114 aa7.95□□□□□ -1.14
CHD3-201ENST00000330494 HIST2H2BCQ6DN03 193 aa7.95□□□□□ -1.14
CHD3-201ENST00000330494 HIST2H2BDQ6DRA6 164 aa7.95□□□□□ -1.14
CHD3-201ENST00000330494 HAMPP81172 84 aa7.94□□□□□ -1.14
CHD3-201ENST00000330494 MRPL53Q96EL3 112 aaKnown RBP7.94□□□□□ -1.14
CHD3-201ENST00000330494 INAFM2P0DMQ5 153 aa7.94□□□□□ -1.14
CHD3-201ENST00000330494 C5orf47Q569G3 176 aa7.94□□□□□ -1.14
CHD3-201ENST00000330494 TMEM190Q8WZ59 177 aa7.94□□□□□ -1.14
CHD3-201ENST00000330494 PLA2G5P39877 138 aa7.94□□□□□ -1.14
CHD3-201ENST00000330494 TMEM258P61165 79 aa7.94□□□□□ -1.14
CHD3-201ENST00000330494 C10orf105Q8TEF2 133 aa7.94□□□□□ -1.14
CHD3-201ENST00000330494 IGKV1OR2-108A0A075B7D4 117 aa7.94□□□□□ -1.14
CHD3-201ENST00000330494 SH2D6Q7Z4S9 175 aa7.94□□□□□ -1.14
CHD3-201ENST00000330494 RNF138Q8WVD3 245 aa7.94□□□□□ -1.14
CHD3-201ENST00000330494 DEFB4AO15263 64 aa7.94□□□□□ -1.14
CHD3-201ENST00000330494 RBMY1FQ15415 496 aaKnown RBP7.94□□□□□ -1.14
CHD3-201ENST00000330494 C10orf91Q5T1B1 145 aa7.94□□□□□ -1.14
CHD3-201ENST00000330494 Q8N9W7 124 aa7.94□□□□□ -1.14
CHD3-201ENST00000330494 ZMAT4Q9H898 229 aa7.94□□□□□ -1.14
CHD3-201ENST00000330494 MRPL35Q9NZE8 188 aaKnown RBP7.94□□□□□ -1.14
CHD3-201ENST00000330494 C5orf56Q8N8D9 126 aa7.94□□□□□ -1.14
CHD3-201ENST00000330494 CARD19Q96LW7 228 aa7.94□□□□□ -1.14
CHD3-201ENST00000330494 WNK1Q9H4A3 2382 aa7.93□□□□□ -1.14
CHD3-201ENST00000330494 TEX48A0A1B0GUV7 120 aa7.93□□□□□ -1.14
CHD3-201ENST00000330494 K7EIM0 57 aa7.93□□□□□ -1.14
CHD3-201ENST00000330494 LTAP01374 205 aa7.93□□□□□ -1.14
CHD3-201ENST00000330494 I3L2K1 104 aa7.93□□□□□ -1.14
CHD3-201ENST00000330494 RPL39LQ96EH5 51 aaKnown RBP7.93□□□□□ -1.14
CHD3-201ENST00000330494 SPRY4Q9C004 299 aa7.93□□□□□ -1.14
CHD3-201ENST00000330494 DKK2Q9UBU2 259 aa7.93□□□□□ -1.14
CHD3-201ENST00000330494 UTF1Q5T230 341 aa7.93□□□□□ -1.14
CHD3-201ENST00000330494 IGF2-ASQ6U949 168 aa7.93□□□□□ -1.14
CHD3-201ENST00000330494 Q8N7P7 452 aa7.93□□□□□ -1.14
CHD3-201ENST00000330494 DSCAML1Q8TD84 2053 aa7.93□□□□□ -1.14
CHD3-201ENST00000330494 POU2AF1Q16633 256 aa7.93□□□□□ -1.14
CHD3-201ENST00000330494 CT83Q5H943 113 aa7.93□□□□□ -1.14
CHD3-201ENST00000330494 TMEM141Q96I45 108 aa7.93□□□□□ -1.14
CHD3-201ENST00000330494 FOXI2Q6ZQN5 318 aa7.92□□□□□ -1.14
CHD3-201ENST00000330494 Q8NFD4 153 aa7.92□□□□□ -1.14
CHD3-201ENST00000330494 NTN5Q8WTR8 489 aaPredicted RBP7.92□□□□□ -1.14
CHD3-201ENST00000330494 C19orf84I3L1E1 186 aa7.92□□□□□ -1.14
CHD3-201ENST00000330494 HCFC1P51610 2035 aa7.92□□□□□ -1.14
CHD3-201ENST00000330494 NPBQ8NG41 125 aa7.92□□□□□ -1.14
CHD3-201ENST00000330494 IGKV2D-24A0A075B6R9 120 aa7.92□□□□□ -1.14
CHD3-201ENST00000330494 PRSS29PA6NIE9 313 aa7.92□□□□□ -1.14
CHD3-201ENST00000330494 UBL5Q9BZL1 73 aa7.92□□□□□ -1.14
CHD3-201ENST00000330494 TRBV12-3P01733 135 aa7.92□□□□□ -1.14
CHD3-201ENST00000330494 TINCRA0A1B0GVN0 87 aa7.91□□□□□ -1.14
CHD3-201ENST00000330494 GP9P14770 177 aa7.91□□□□□ -1.14
CHD3-201ENST00000330494 NKAPP1Q8N9T2 125 aa7.91□□□□□ -1.14
CHD3-201ENST00000330494 TTC28Q96AY4 2481 aa7.91□□□□□ -1.14
CHD3-201ENST00000330494 F8WEM9 126 aa7.91□□□□□ -1.14
CHD3-201ENST00000330494 SMIM2Q9BVW6 85 aa7.91□□□□□ -1.14
CHD3-201ENST00000330494 IGLV10-54A0A075B6I4 117 aa7.91□□□□□ -1.14
CHD3-201ENST00000330494 TRAV26-1A0A087WT03 109 aa7.91□□□□□ -1.14
CHD3-201ENST00000330494 NDUFC2O95298 119 aa7.91□□□□□ -1.14
CHD3-201ENST00000330494 PRB2P02812 416 aaPredicted RBP7.91□□□□□ -1.14
CHD3-201ENST00000330494 IGLV11-55A0A075B6I3 123 aa7.9□□□□□ -1.14
CHD3-201ENST00000330494 PRAC2D3DTV9 90 aa7.9□□□□□ -1.14
CHD3-201ENST00000330494 C12orf74Q32Q52 190 aa7.9□□□□□ -1.14
CHD3-201ENST00000330494 TRAV25A0A0B4J276 109 aa7.9□□□□□ -1.14
CHD3-201ENST00000330494 ODF3L1Q8IXM7 274 aa7.9□□□□□ -1.14
CHD3-201ENST00000330494 C8orf31Q8N9H6 132 aa7.9□□□□□ -1.14
CHD3-201ENST00000330494 SPANXDQ9BXN6 97 aa7.9□□□□□ -1.14
CHD3-201ENST00000330494 PRO1854Q9UHT4 67 aa7.9□□□□□ -1.14
CHD3-201ENST00000330494 KLF2Q9Y5W3 355 aaPredicted RBP7.9□□□□□ -1.14
CHD3-201ENST00000330494 PTPRSQ13332 1948 aa7.9□□□□□ -1.14
CHD3-201ENST00000330494 IGLV2-14P01704 120 aa7.9□□□□□ -1.14
CHD3-201ENST00000330494 FAM231DQ6ZW35 169 aa7.9□□□□□ -1.14
CHD3-201ENST00000330494 PIFOQ8TCI5 191 aa7.9□□□□□ -1.14
CHD3-201ENST00000330494 MSRB1Q9NZV6 116 aa7.9□□□□□ -1.14
CHD3-201ENST00000330494 CTSGP08311 255 aa7.9□□□□□ -1.14
CHD3-201ENST00000330494 IL15RAQ13261 267 aa7.9□□□□□ -1.14
CHD3-201ENST00000330494 PATE2Q6UY27 113 aa7.9□□□□□ -1.14
CHD3-201ENST00000330494 C22orf34Q6ZV56 151 aa7.9□□□□□ -1.15
CHD3-201ENST00000330494 H3BUA1 57 aa7.9□□□□□ -1.15
CHD3-201ENST00000330494 NDUFA12Q9UI09 145 aa7.9□□□□□ -1.15
CHD3-201ENST00000330494 J3KT08 172 aa7.89□□□□□ -1.15
CHD3-201ENST00000330494 ARHGAP32A7KAX9 2087 aa7.89□□□□□ -1.15
CHD3-201ENST00000330494 PLA2G2EQ9NZK7 142 aa7.89□□□□□ -1.15
CHD3-201ENST00000330494 PROP1O75360 226 aa7.89□□□□□ -1.15
CHD3-201ENST00000330494 IGKV1-17P01599 117 aa7.89□□□□□ -1.15
CHD3-201ENST00000330494 PLXNB1O43157 2135 aa7.89□□□□□ -1.15
CHD3-201ENST00000330494 IGHV4-4A0A075B6R2 117 aa7.89□□□□□ -1.15
CHD3-201ENST00000330494 C5orf38Q86SI9 138 aa7.89□□□□□ -1.15
CHD3-201ENST00000330494 MRPL36Q9P0J6 103 aaKnown RBP7.89□□□□□ -1.15
CHD3-201ENST00000330494 WDR87Q6ZQQ6 2873 aa7.89□□□□□ -1.15
CHD3-201ENST00000330494 IGHV3-30P01768 117 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 137.4 ms