RNA–Protein interactions for RNA: ENST00000330133.4

MRPL54-201, Transcript of mitochondrial ribosomal protein L54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL54, Length 626 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54-201ENST00000330133 IL36BQ9NZH7 164 aa13.22□□□□□ -0.29
MRPL54-201ENST00000330133 PGPEP1LA6NFU8 196 aa13.21□□□□□ -0.29
MRPL54-201ENST00000330133 H3BVH4 76 aa13.21□□□□□ -0.29
MRPL54-201ENST00000330133 MGST1P10620 155 aaKnown RBP13.21□□□□□ -0.29
MRPL54-201ENST00000330133 CCL18P55774 89 aa13.21□□□□□ -0.29
MRPL54-201ENST00000330133 ZNF506Q5JVG8 444 aa13.21□□□□□ -0.29
MRPL54-201ENST00000330133 SMIM12Q96EX1 92 aa13.21□□□□□ -0.29
MRPL54-201ENST00000330133 RS1O15537 224 aa13.2□□□□□ -0.3
MRPL54-201ENST00000330133 CIDEAO60543 219 aa13.2□□□□□ -0.3
MRPL54-201ENST00000330133 ARMS2P0C7Q2 107 aa13.2□□□□□ -0.3
MRPL54-201ENST00000330133 CRYBA4P53673 196 aa13.2□□□□□ -0.3
MRPL54-201ENST00000330133 TEX261Q6UWH6 196 aa13.2□□□□□ -0.3
MRPL54-201ENST00000330133 DAZAP1Q96EP5 407 aaKnown RBP13.2□□□□□ -0.3
MRPL54-201ENST00000330133 FAM3BP58499 235 aaPredicted RBP13.19□□□□□ -0.3
MRPL54-201ENST00000330133 PIK3CD-AS1Q5SR53 167 aa13.19□□□□□ -0.3
MRPL54-201ENST00000330133 SYT8Q8NBV8 401 aa13.19□□□□□ -0.3
MRPL54-201ENST00000330133 EIF5A2Q9GZV4 153 aaKnown RBP13.19□□□□□ -0.3
MRPL54-201ENST00000330133 BIN3Q9NQY0 253 aa13.19□□□□□ -0.3
MRPL54-201ENST00000330133 ICOSQ9Y6W8 199 aa13.19□□□□□ -0.3
MRPL54-201ENST00000330133 TMEM250H0YL14 139 aa13.18□□□□□ -0.3
MRPL54-201ENST00000330133 IGLV2-8P01709 118 aa13.18□□□□□ -0.3
MRPL54-201ENST00000330133 TOR2AQ5JU69 321 aa13.18□□□□□ -0.3
MRPL54-201ENST00000330133 CFAP126Q5VTH2 177 aa13.18□□□□□ -0.3
MRPL54-201ENST00000330133 PHLDA3Q9Y5J5 127 aa13.18□□□□□ -0.3
MRPL54-201ENST00000330133 VPS13DQ5THJ4 4388 aa13.18□□□□□ -0.3
MRPL54-201ENST00000330133 HYDINQ4G0P3 5121 aa13.17□□□□□ -0.3
MRPL54-201ENST00000330133 A0A096LPF7 62 aa13.17□□□□□ -0.3
MRPL54-201ENST00000330133 CXCL1P09341 107 aa13.17□□□□□ -0.3
MRPL54-201ENST00000330133 RPL19P84098 196 aaKnown RBP13.17□□□□□ -0.3
MRPL54-201ENST00000330133 ZNF575Q86XF7 245 aa13.17□□□□□ -0.3
MRPL54-201ENST00000330133 PCNPQ8WW12 178 aaKnown RBP13.17□□□□□ -0.3
MRPL54-201ENST00000330133 A8MWV9 139 aa13.16□□□□□ -0.3
MRPL54-201ENST00000330133 MED14OSP0DP75 135 aa13.16□□□□□ -0.3
MRPL54-201ENST00000330133 MRPL23Q16540 153 aaKnown RBP13.16□□□□□ -0.3
MRPL54-201ENST00000330133 FAM210AQ96ND0 272 aa13.16□□□□□ -0.3
MRPL54-201ENST00000330133 SCRT2Q9NQ03 307 aa13.16□□□□□ -0.3
MRPL54-201ENST00000330133 TRBV20OR9-2A0A075B6H5 130 aa13.15□□□□□ -0.3
MRPL54-201ENST00000330133 GATA1P15976 413 aaPredicted RBP13.15□□□□□ -0.3
MRPL54-201ENST00000330133 CEBPGP53567 150 aa13.15□□□□□ -0.3
MRPL54-201ENST00000330133 DMRTA1Q5VZB9 504 aa13.15□□□□□ -0.3
MRPL54-201ENST00000330133 PARLQ9H300 379 aa13.15□□□□□ -0.3
MRPL54-201ENST00000330133 LINC00588Q9Y4M8 146 aa13.15□□□□□ -0.3
MRPL54-201ENST00000330133 MUC4Q99102 2169 aa13.14□□□□□ -0.31
MRPL54-201ENST00000330133 IGHV3-73A0A0B4J1V6 119 aa13.14□□□□□ -0.31
MRPL54-201ENST00000330133 NDUFS6O75380 124 aaKnown RBP13.14□□□□□ -0.31
MRPL54-201ENST00000330133 GYPEP15421 78 aa13.14□□□□□ -0.31
MRPL54-201ENST00000330133 RPS20P60866 119 aaKnown RBP13.14□□□□□ -0.31
MRPL54-201ENST00000330133 ESRGQ1W209 222 aa13.14□□□□□ -0.31
MRPL54-201ENST00000330133 ZFP82Q8N141 532 aa13.14□□□□□ -0.31
MRPL54-201ENST00000330133 C19orf71A6NCJ1 209 aa13.13□□□□□ -0.31
MRPL54-201ENST00000330133 M0R381 172 aa13.13□□□□□ -0.31
MRPL54-201ENST00000330133 P01737 135 aa13.13□□□□□ -0.31
MRPL54-201ENST00000330133 ZFP2Q6ZN57 461 aa13.13□□□□□ -0.31
MRPL54-201ENST00000330133 OR2D3Q8NGH3 330 aa13.13□□□□□ -0.31
MRPL54-201ENST00000330133 IGLV2-18A0A075B6J9 118 aa13.12□□□□□ -0.31
MRPL54-201ENST00000330133 XKRY2A2RUG3 117 aa13.12□□□□□ -0.31
MRPL54-201ENST00000330133 K7EQD1 137 aa13.12□□□□□ -0.31
MRPL54-201ENST00000330133 SRIP30626 198 aa13.12□□□□□ -0.31
MRPL54-201ENST00000330133 NEGR1Q7Z3B1 354 aa13.12□□□□□ -0.31
MRPL54-201ENST00000330133 OCC1Q8TAD7 63 aa13.12□□□□□ -0.31
MRPL54-201ENST00000330133 PRADC1Q9BSG0 188 aa13.12□□□□□ -0.31
MRPL54-201ENST00000330133 JPT2Q9H910 190 aa13.12□□□□□ -0.31
MRPL54-201ENST00000330133 M0R2N4 97 aa13.11□□□□□ -0.31
MRPL54-201ENST00000330133 SLC25A29Q8N8R3 303 aa13.11□□□□□ -0.31
MRPL54-201ENST00000330133 SFRP2Q96HF1 295 aa13.11□□□□□ -0.31
MRPL54-201ENST00000330133 TRBV6-4A0A1B0GX49 114 aa13.1□□□□□ -0.31
MRPL54-201ENST00000330133 RHODO00212 210 aa13.1□□□□□ -0.31
MRPL54-201ENST00000330133 SNAI2O43623 268 aa13.1□□□□□ -0.31
MRPL54-201ENST00000330133 SRP19P09132 144 aaKnown RBP13.1□□□□□ -0.31
MRPL54-201ENST00000330133 RHOHQ15669 191 aa13.1□□□□□ -0.31
MRPL54-201ENST00000330133 ZNRF2Q8NHG8 242 aa13.1□□□□□ -0.31
MRPL54-201ENST00000330133 SSBP4Q9BWG4 385 aaPredicted RBP13.1□□□□□ -0.31
MRPL54-201ENST00000330133 MRPS16Q9Y3D3 137 aaKnown RBP13.1□□□□□ -0.31
MRPL54-201ENST00000330133 OR5AL1P0C617 328 aa13.09□□□□□ -0.31
MRPL54-201ENST00000330133 SPANXN1Q5VSR9 72 aa13.09□□□□□ -0.31
MRPL54-201ENST00000330133 SH2D6Q7Z4S9 175 aa13.09□□□□□ -0.31
MRPL54-201ENST00000330133 NUDT10Q8NFP7 164 aa13.09□□□□□ -0.31
MRPL54-201ENST00000330133 NUDT11Q96G61 164 aa13.09□□□□□ -0.31
MRPL54-201ENST00000330133 SMIM7Q9BQ49 75 aa13.09□□□□□ -0.31
MRPL54-201ENST00000330133 SAMD10Q9BYL1 202 aa13.09□□□□□ -0.31
MRPL54-201ENST00000330133 LOC100131303A0A0U1RQF7 123 aa13.08□□□□□ -0.32
MRPL54-201ENST00000330133 K7EN84 100 aa13.08□□□□□ -0.32
MRPL54-201ENST00000330133 GZMBP10144 247 aa13.08□□□□□ -0.32
MRPL54-201ENST00000330133 PEA15Q15121 130 aa13.08□□□□□ -0.32
MRPL54-201ENST00000330133 FAM74A4Q5TZK3 123 aa13.08□□□□□ -0.32
MRPL54-201ENST00000330133 LYPD5Q6UWN5 251 aa13.08□□□□□ -0.32
MRPL54-201ENST00000330133 FER1L6-AS1Q8NA97 138 aa13.08□□□□□ -0.32
MRPL54-201ENST00000330133 OR10AG1Q8NH19 301 aa13.08□□□□□ -0.32
MRPL54-201ENST00000330133 UPK3BQ9BT76 320 aa13.08□□□□□ -0.32
MRPL54-201ENST00000330133 Q9H8V8 135 aa13.08□□□□□ -0.32
MRPL54-201ENST00000330133 LY96Q9Y6Y9 160 aa13.08□□□□□ -0.32
MRPL54-201ENST00000330133 A0A087WWL8 130 aa13.07□□□□□ -0.32
MRPL54-201ENST00000330133 MUC21A0A0G2JKD1 596 aa13.07□□□□□ -0.32
MRPL54-201ENST00000330133 MUC21A0A140T8X8 626 aa13.07□□□□□ -0.32
MRPL54-201ENST00000330133 ZNF727A8MUV8 499 aa13.07□□□□□ -0.32
MRPL54-201ENST00000330133 NXPH4O95158 308 aa13.07□□□□□ -0.32
MRPL54-201ENST00000330133 UFSP1Q6NVU6 142 aa13.07□□□□□ -0.32
MRPL54-201ENST00000330133 TPPP3Q9BW30 176 aa13.07□□□□□ -0.32
MRPL54-201ENST00000330133 DNAH6Q9C0G6 4158 aa13.06□□□□□ -0.32
MRPL54-201ENST00000330133 KMT2AQ03164 3969 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms