RNA–Protein interactions for RNA: ENST00000317402.11

GEN1-201, Transcript of GEN1, Holliday junction 5' flap endonuclease, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GEN1, Length 9,854 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GEN1-201ENST00000317402 FAM236CP0DP71 79 aa2.9□□□□□ -1.95
GEN1-201ENST00000317402 RPL27AP46776 148 aaKnown RBP2.9□□□□□ -1.95
GEN1-201ENST00000317402 OR11H6Q8NGC7 330 aa2.9□□□□□ -1.95
GEN1-201ENST00000317402 TMEM54Q969K7 222 aa2.9□□□□□ -1.95
GEN1-201ENST00000317402 OSTCQ9NRP0 149 aa2.9□□□□□ -1.95
GEN1-201ENST00000317402 LINC00312Q9Y6C7 94 aa2.9□□□□□ -1.95
GEN1-201ENST00000317402 C17orf98A8MV24 154 aa2.9□□□□□ -1.95
GEN1-201ENST00000317402 UQCRQO14949 82 aa2.9□□□□□ -1.95
GEN1-201ENST00000317402 PFN1P07737 140 aaKnown RBP2.9□□□□□ -1.95
GEN1-201ENST00000317402 RNASE2P10153 161 aaKnown RBP2.9□□□□□ -1.95
GEN1-201ENST00000317402 LINC00310P59036 64 aa2.9□□□□□ -1.95
GEN1-201ENST00000317402 PEAR1Q5VY43 1037 aaPredicted RBP2.9□□□□□ -1.95
GEN1-201ENST00000317402 FOXI2Q6ZQN5 318 aa2.9□□□□□ -1.95
GEN1-201ENST00000317402 C8orf31Q8N9H6 132 aa2.9□□□□□ -1.95
GEN1-201ENST00000317402 ZNRF1Q8ND25 227 aa2.9□□□□□ -1.95
GEN1-201ENST00000317402 TTTY12Q9BZ98 90 aa2.9□□□□□ -1.95
GEN1-201ENST00000317402 SLC25A15Q9Y619 301 aa2.9□□□□□ -1.95
GEN1-201ENST00000317402 ZNF469Q96JG9 3925 aaPredicted RBP2.9□□□□□ -1.95
GEN1-201ENST00000317402 PRM2P04554 102 aa2.9□□□□□ -1.95
GEN1-201ENST00000317402 NTN5Q8WTR8 489 aaPredicted RBP2.9□□□□□ -1.95
GEN1-201ENST00000317402 RNF5Q99942 180 aa2.9□□□□□ -1.95
GEN1-201ENST00000317402 IGHV3-66A0A0C4DH42 116 aa2.9□□□□□ -1.95
GEN1-201ENST00000317402 PROP1O75360 226 aa2.9□□□□□ -1.95
GEN1-201ENST00000317402 CD69Q07108 199 aa2.9□□□□□ -1.95
GEN1-201ENST00000317402 PMS2CLQ68D20 193 aa2.9□□□□□ -1.95
GEN1-201ENST00000317402 C4orf3Q8WVX3 66 aa2.9□□□□□ -1.95
GEN1-201ENST00000317402 C1orf159Q96HA4 380 aa2.9□□□□□ -1.95
GEN1-201ENST00000317402 A0A0U1RRA0 63 aa2.9□□□□□ -1.95
GEN1-201ENST00000317402 LINC01548A6NM66 108 aa2.9□□□□□ -1.95
GEN1-201ENST00000317402 SHISA9B4DS77 424 aa2.9□□□□□ -1.95
GEN1-201ENST00000317402 F8WEM9 126 aa2.9□□□□□ -1.95
GEN1-201ENST00000317402 LINC00305Q7Z4B0 112 aa2.9□□□□□ -1.95
GEN1-201ENST00000317402 MPLKIPQ8TAP9 179 aa2.9□□□□□ -1.95
GEN1-201ENST00000317402 LINC01560Q8TB33 94 aa2.9□□□□□ -1.95
GEN1-201ENST00000317402 CD59P13987 128 aa2.89□□□□□ -1.95
GEN1-201ENST00000317402 NUP35Q8NFH5 326 aa2.89□□□□□ -1.95
GEN1-201ENST00000317402 TRBV6-6A0A0A6YYG2 114 aa2.89□□□□□ -1.95
GEN1-201ENST00000317402 NDUFC2-KCTD14E9PQ53 114 aa2.89□□□□□ -1.95
GEN1-201ENST00000317402 C12orf74Q32Q52 190 aa2.89□□□□□ -1.95
GEN1-201ENST00000317402 MINOS1Q5TGZ0 78 aa2.89□□□□□ -1.95
GEN1-201ENST00000317402 GATD1Q8NB37 220 aa2.89□□□□□ -1.95
GEN1-201ENST00000317402 MINOS1-NBL1R4GNA1 71 aa2.89□□□□□ -1.95
GEN1-201ENST00000317402 IGHV1-24A0A0C4DH33 117 aa2.89□□□□□ -1.95
GEN1-201ENST00000317402 F8WDY8 70 aa2.89□□□□□ -1.95
GEN1-201ENST00000317402 CCL3L1P16619 93 aa2.89□□□□□ -1.95
GEN1-201ENST00000317402 ID3Q02535 119 aa2.89□□□□□ -1.95
GEN1-201ENST00000317402 TMEM167AQ8TBQ9 72 aa2.89□□□□□ -1.95
GEN1-201ENST00000317402 C17orf77Q96MU5 243 aa2.89□□□□□ -1.95
GEN1-201ENST00000317402 ANAPC10Q9UM13 185 aa2.89□□□□□ -1.95
GEN1-201ENST00000317402 TRBV20OR9-2A0A075B6H5 130 aa2.89□□□□□ -1.95
GEN1-201ENST00000317402 LINC00473A8K010 186 aa2.89□□□□□ -1.95
GEN1-201ENST00000317402 COX7A1P24310 79 aa2.89□□□□□ -1.95
GEN1-201ENST00000317402 LAGE3Q14657 143 aa2.89□□□□□ -1.95
GEN1-201ENST00000317402 TMEM42Q69YG0 159 aa2.89□□□□□ -1.95
GEN1-201ENST00000317402 GGNQ86UU5 652 aa2.89□□□□□ -1.95
GEN1-201ENST00000317402 GFRA4Q9GZZ7 299 aa2.89□□□□□ -1.95
GEN1-201ENST00000317402 E9PLD3 99 aa2.89□□□□□ -1.95
GEN1-201ENST00000317402 IGKV1-5P01602 117 aa2.89□□□□□ -1.95
GEN1-201ENST00000317402 PRO0628Q9UI54 55 aa2.89□□□□□ -1.95
GEN1-201ENST00000317402 TCF19Q9Y242 345 aa2.89□□□□□ -1.95
GEN1-201ENST00000317402 CECR9P0C854 216 aa2.89□□□□□ -1.95
GEN1-201ENST00000317402 PFN2P35080 140 aa2.89□□□□□ -1.95
GEN1-201ENST00000317402 C9orf106Q8NAJ2 232 aa2.89□□□□□ -1.95
GEN1-201ENST00000317402 CARD19Q96LW7 228 aa2.89□□□□□ -1.95
GEN1-201ENST00000317402 IGLC6P0CF74 106 aa2.89□□□□□ -1.95
GEN1-201ENST00000317402 ZNF134P52741 427 aa2.89□□□□□ -1.95
GEN1-201ENST00000317402 B3GALT5-AS1P59052 145 aa2.89□□□□□ -1.95
GEN1-201ENST00000317402 FAM74A4Q5TZK3 123 aa2.89□□□□□ -1.95
GEN1-201ENST00000317402 CTSZQ9UBR2 303 aa2.89□□□□□ -1.95
GEN1-201ENST00000317402 IGHV3OR16-13A0A075B7E8 117 aa2.89□□□□□ -1.95
GEN1-201ENST00000317402 IGHV3-74A0A0B4J1X5 117 aa2.89□□□□□ -1.95
GEN1-201ENST00000317402 hADV29S1A0JD25 119 aa2.89□□□□□ -1.95
GEN1-201ENST00000317402 RHODO00212 210 aa2.89□□□□□ -1.95
GEN1-201ENST00000317402 CCL21O00585 134 aa2.89□□□□□ -1.95
GEN1-201ENST00000317402 JPT2Q9H910 190 aa2.89□□□□□ -1.95
GEN1-201ENST00000317402 FAM223BA6NKX1 122 aa2.88□□□□□ -1.95
GEN1-201ENST00000317402 CGAP01215 116 aa2.88□□□□□ -1.95
GEN1-201ENST00000317402 IGHG3P01860 377 aa2.88□□□□□ -1.95
GEN1-201ENST00000317402 FOXL2NBQ6ZUU3 175 aa2.88□□□□□ -1.95
GEN1-201ENST00000317402 FAM223AQ8IWN6 122 aa2.88□□□□□ -1.95
GEN1-201ENST00000317402 TM2D1Q9BX74 207 aa2.88□□□□□ -1.95
GEN1-201ENST00000317402 SCRT2Q9NQ03 307 aa2.88□□□□□ -1.95
GEN1-201ENST00000317402 LY96Q9Y6Y9 160 aa2.88□□□□□ -1.95
GEN1-201ENST00000317402 CD7P09564 240 aa2.88□□□□□ -1.95
GEN1-201ENST00000317402 HLA-DMBP28068 263 aa2.88□□□□□ -1.95
GEN1-201ENST00000317402 Q6ZSR3 168 aa2.88□□□□□ -1.95
GEN1-201ENST00000317402 IFI27L2Q9H2X8 130 aa2.88□□□□□ -1.95
GEN1-201ENST00000317402 IGKV3D-15A0A087WSY6 115 aa2.88□□□□□ -1.95
GEN1-201ENST00000317402 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP2.88□□□□□ -1.95
GEN1-201ENST00000317402 SLC25A47Q6Q0C1 308 aa2.88□□□□□ -1.95
GEN1-201ENST00000317402 ZNF525Q8N782 197 aa2.88□□□□□ -1.95
GEN1-201ENST00000317402 VWC2LB2RUY7 222 aa2.88□□□□□ -1.95
GEN1-201ENST00000317402 PEX7O00628 323 aa2.88□□□□□ -1.95
GEN1-201ENST00000317402 IGHV1-2P23083 117 aa2.88□□□□□ -1.95
GEN1-201ENST00000317402 LYPD2Q6UXB3 125 aa2.88□□□□□ -1.95
GEN1-201ENST00000317402 CALYQ9NYX4 217 aa2.88□□□□□ -1.95
GEN1-201ENST00000317402 IL15RAQ13261 267 aa2.88□□□□□ -1.95
GEN1-201ENST00000317402 MBD3L2Q8NHZ7 208 aaPredicted RBP2.88□□□□□ -1.95
GEN1-201ENST00000317402 PLEKHB2Q96CS7 222 aa2.88□□□□□ -1.95
GEN1-201ENST00000317402 C9JCJ5 164 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms