RNA–Protein interactions for RNA: ENST00000298396.6

SSX3-201, Transcript of SSX family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX3, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-201ENST00000298396 TMEM208Q9BTX3 173 aa4.19□□□□□ -1.74
SSX3-201ENST00000298396 EIF5A2Q9GZV4 153 aaKnown RBP4.19□□□□□ -1.74
SSX3-201ENST00000298396 GSN-AS1Q9NRJ2 163 aa4.19□□□□□ -1.74
SSX3-201ENST00000298396 MDFICQ9P1T7 246 aa4.19□□□□□ -1.74
SSX3-201ENST00000298396 FRAS1Q86XX4 4008 aa4.18□□□□□ -1.74
SSX3-201ENST00000298396 TRAV21A0A0B4J279 112 aa4.18□□□□□ -1.74
SSX3-201ENST00000298396 LINC00862A6NCI5 91 aa4.18□□□□□ -1.74
SSX3-201ENST00000298396 KRBOX1C9JBD0 128 aa4.18□□□□□ -1.74
SSX3-201ENST00000298396 C9JCJ5 164 aa4.18□□□□□ -1.74
SSX3-201ENST00000298396 RNASE3P12724 160 aaKnown RBP4.18□□□□□ -1.74
SSX3-201ENST00000298396 ADCYAP1P18509 176 aa4.18□□□□□ -1.74
SSX3-201ENST00000298396 EMP1P54849 157 aa4.18□□□□□ -1.74
SSX3-201ENST00000298396 RPL19P84098 196 aaKnown RBP4.18□□□□□ -1.74
SSX3-201ENST00000298396 C12orf74Q32Q52 190 aa4.18□□□□□ -1.74
SSX3-201ENST00000298396 FAM162BQ5T6X4 162 aa4.18□□□□□ -1.74
SSX3-201ENST00000298396 FAM222AQ5U5X8 452 aa4.18□□□□□ -1.74
SSX3-201ENST00000298396 LINC00612Q8N6U2 182 aa4.18□□□□□ -1.74
SSX3-201ENST00000298396 C16orf74Q96GX8 76 aa4.18□□□□□ -1.74
SSX3-201ENST00000298396 NDFIP1Q9BT67 221 aa4.18□□□□□ -1.74
SSX3-201ENST00000298396 NAGKQ9UJ70 344 aa4.18□□□□□ -1.74
SSX3-201ENST00000298396 KMT2CQ8NEZ4 4911 aaKnown RBP4.18□□□□□ -1.74
SSX3-201ENST00000298396 CBY3A6NI87 242 aa4.17□□□□□ -1.74
SSX3-201ENST00000298396 FABP5P3A8MUU1 101 aa4.17□□□□□ -1.74
SSX3-201ENST00000298396 M0R036 132 aa4.17□□□□□ -1.74
SSX3-201ENST00000298396 SPINK4O60575 86 aa4.17□□□□□ -1.74
SSX3-201ENST00000298396 GNG4P50150 75 aa4.17□□□□□ -1.74
SSX3-201ENST00000298396 CEBPGP53567 150 aa4.17□□□□□ -1.74
SSX3-201ENST00000298396 TCL1AP56279 114 aa4.17□□□□□ -1.74
SSX3-201ENST00000298396 DAZ2Q13117 558 aaKnown RBP4.17□□□□□ -1.74
SSX3-201ENST00000298396 DNLZQ5SXM8 178 aa4.17□□□□□ -1.74
SSX3-201ENST00000298396 IBA57Q5T440 356 aaKnown RBP4.17□□□□□ -1.74
SSX3-201ENST00000298396 PRR27Q6MZM9 219 aa4.17□□□□□ -1.74
SSX3-201ENST00000298396 ZNF493Q6ZR52 646 aa4.17□□□□□ -1.74
SSX3-201ENST00000298396 Q6ZTC4 211 aa4.17□□□□□ -1.74
SSX3-201ENST00000298396 Q6ZTI0 123 aa4.17□□□□□ -1.74
SSX3-201ENST00000298396 LINC01551Q86U37 167 aa4.17□□□□□ -1.74
SSX3-201ENST00000298396 C9orf85Q96MD7 179 aa4.17□□□□□ -1.74
SSX3-201ENST00000298396 SMIM7Q9BQ49 75 aa4.17□□□□□ -1.74
SSX3-201ENST00000298396 RNASE7Q9H1E1 156 aaKnown RBP4.17□□□□□ -1.74
SSX3-201ENST00000298396 NOP10Q9NPE3 64 aaKnown RBP4.17□□□□□ -1.74
SSX3-201ENST00000298396 TMSB15BA0A087X1C1 80 aa4.16□□□□□ -1.74
SSX3-201ENST00000298396 GRIFINA4D1Z8 144 aa4.16□□□□□ -1.74
SSX3-201ENST00000298396 TMEM189A5PLL7 270 aa4.16□□□□□ -1.74
SSX3-201ENST00000298396 LYRM9A8MSI8 78 aa4.16□□□□□ -1.74
SSX3-201ENST00000298396 B4DEV8 164 aa4.16□□□□□ -1.74
SSX3-201ENST00000298396 ORM1P02763 201 aa4.16□□□□□ -1.74
SSX3-201ENST00000298396 SFTA3P0C7M3 94 aa4.16□□□□□ -1.74
SSX3-201ENST00000298396 GZMBP10144 247 aa4.16□□□□□ -1.74
SSX3-201ENST00000298396 MGST1P10620 155 aaKnown RBP4.16□□□□□ -1.74
SSX3-201ENST00000298396 RAB14P61106 215 aa4.16□□□□□ -1.74
SSX3-201ENST00000298396 RPL23P62829 140 aaKnown RBP4.16□□□□□ -1.74
SSX3-201ENST00000298396 PEA15Q15121 130 aa4.16□□□□□ -1.74
SSX3-201ENST00000298396 FAM159AQ6UWV7 190 aa4.16□□□□□ -1.74
SSX3-201ENST00000298396 COMMD7Q86VX2 200 aa4.16□□□□□ -1.74
SSX3-201ENST00000298396 POM121L12Q8N7R1 296 aa4.16□□□□□ -1.74
SSX3-201ENST00000298396 SMIM12Q96EX1 92 aa4.16□□□□□ -1.74
SSX3-201ENST00000298396 SMDT1Q9H4I9 107 aa4.16□□□□□ -1.74
SSX3-201ENST00000298396 SDF2L1Q9HCN8 221 aa4.16□□□□□ -1.74
SSX3-201ENST00000298396 SCRT2Q9NQ03 307 aa4.16□□□□□ -1.74
SSX3-201ENST00000298396 MRPL16Q9NX20 251 aaKnown RBP4.16□□□□□ -1.74
SSX3-201ENST00000298396 TIMM8BQ9Y5J9 83 aaPredicted RBP4.16□□□□□ -1.74
SSX3-201ENST00000298396 LY96Q9Y6Y9 160 aa4.16□□□□□ -1.74
SSX3-201ENST00000298396 RYR2Q92736 4967 aa4.16□□□□□ -1.74
SSX3-201ENST00000298396 TRGV11A0A075B6L2 103 aa4.15□□□□□ -1.75
SSX3-201ENST00000298396 CXorf65A6NEN9 183 aa4.15□□□□□ -1.75
SSX3-201ENST00000298396 ZNF727A8MUV8 499 aa4.15□□□□□ -1.75
SSX3-201ENST00000298396 H3BVH4 76 aa4.15□□□□□ -1.75
SSX3-201ENST00000298396 IGLC6P0CF74 106 aa4.15□□□□□ -1.75
SSX3-201ENST00000298396 ZNF415Q09FC8 603 aa4.15□□□□□ -1.75
SSX3-201ENST00000298396 ZFAND6Q6FIF0 208 aa4.15□□□□□ -1.75
SSX3-201ENST00000298396 C11orf45Q8TAV5 145 aa4.15□□□□□ -1.75
SSX3-201ENST00000298396 MUC7Q8TAX7 377 aa4.15□□□□□ -1.75
SSX3-201ENST00000298396 ISOC2Q96AB3 205 aa4.15□□□□□ -1.75
SSX3-201ENST00000298396 KCNS1Q96KK3 526 aa4.15□□□□□ -1.75
SSX3-201ENST00000298396 TRGV1A0A0A0MS02 117 aa4.14□□□□□ -1.75
SSX3-201ENST00000298396 MUC21A0A0G2JKD1 596 aa4.14□□□□□ -1.75
SSX3-201ENST00000298396 MUC21A0A140T8X8 626 aa4.14□□□□□ -1.75
SSX3-201ENST00000298396 TMEM218A2RU14 115 aa4.14□□□□□ -1.75
SSX3-201ENST00000298396 SNURFLB1AK76 121 aa4.14□□□□□ -1.75
SSX3-201ENST00000298396 SNAI2O43623 268 aa4.14□□□□□ -1.75
SSX3-201ENST00000298396 GAGE7O76087 117 aa4.14□□□□□ -1.75
SSX3-201ENST00000298396 NXPH4O95158 308 aa4.14□□□□□ -1.75
SSX3-201ENST00000298396 CXCL1P09341 107 aa4.14□□□□□ -1.75
SSX3-201ENST00000298396 GAGE12FP0CL80 117 aa4.14□□□□□ -1.75
SSX3-201ENST00000298396 GAGE12GP0CL81 117 aa4.14□□□□□ -1.75
SSX3-201ENST00000298396 GAGE12IP0CL82 117 aa4.14□□□□□ -1.75
SSX3-201ENST00000298396 SPART-AS1P0CW21 52 aa4.14□□□□□ -1.75
SSX3-201ENST00000298396 DEFB130BP0DP73 79 aa4.14□□□□□ -1.75
SSX3-201ENST00000298396 DEFB130AP0DP74 79 aa4.14□□□□□ -1.75
SSX3-201ENST00000298396 DAD1P61803 113 aa4.14□□□□□ -1.75
SSX3-201ENST00000298396 TMEM241Q24JQ0 296 aa4.14□□□□□ -1.75
SSX3-201ENST00000298396 FAM74A3Q4VXF1 159 aa4.14□□□□□ -1.75
SSX3-201ENST00000298396 SOHLH1Q5JUK2 328 aa4.14□□□□□ -1.75
SSX3-201ENST00000298396 C10orf91Q5T1B1 145 aa4.14□□□□□ -1.75
SSX3-201ENST00000298396 UFSP1Q6NVU6 142 aa4.14□□□□□ -1.75
SSX3-201ENST00000298396 UQCC3Q6UW78 93 aa4.14□□□□□ -1.75
SSX3-201ENST00000298396 FAM231DQ6ZW35 169 aa4.14□□□□□ -1.75
SSX3-201ENST00000298396 OR2D3Q8NGH3 330 aa4.14□□□□□ -1.75
SSX3-201ENST00000298396 PHLDA1Q8WV24 401 aaPredicted RBP4.14□□□□□ -1.75
SSX3-201ENST00000298396 GTSF1Q8WW33 167 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms