RNA–Protein interactions for RNA: ENST00000288022.1

PDF-201, Transcript of peptide deformylase, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDF, Length 1,158 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDF-201ENST00000288022 PCNPQ8WW12 178 aaKnown RBP17.42■□□□□ 0.38
PDF-201ENST00000288022 DERL1Q9BUN8 251 aa17.42■□□□□ 0.38
PDF-201ENST00000288022 BOLA1Q9Y3E2 137 aa17.42■□□□□ 0.38
PDF-201ENST00000288022 BCL2P10415 239 aa17.41■□□□□ 0.38
PDF-201ENST00000288022 LINC01559Q495D7 138 aa17.41■□□□□ 0.38
PDF-201ENST00000288022 PTH2Q96A98 100 aa17.41■□□□□ 0.38
PDF-201ENST00000288022 IL36BQ9NZH7 164 aa17.41■□□□□ 0.38
PDF-201ENST00000288022 RS1O15537 224 aa17.4■□□□□ 0.38
PDF-201ENST00000288022 PDE6DO43924 150 aa17.4■□□□□ 0.38
PDF-201ENST00000288022 BLOC1S1P78537 153 aa17.4■□□□□ 0.38
PDF-201ENST00000288022 MRPL23Q16540 153 aaKnown RBP17.4■□□□□ 0.38
PDF-201ENST00000288022 CFAP126Q5VTH2 177 aa17.4■□□□□ 0.38
PDF-201ENST00000288022 PRR27Q6MZM9 219 aa17.4■□□□□ 0.38
PDF-201ENST00000288022 MLST8Q9BVC4 326 aa17.4■□□□□ 0.38
PDF-201ENST00000288022 VAX2Q9UIW0 290 aa17.4■□□□□ 0.38
PDF-201ENST00000288022 DNAH6Q9C0G6 4158 aa17.4■□□□□ 0.38
PDF-201ENST00000288022 ARMS2P0C7Q2 107 aa17.39■□□□□ 0.37
PDF-201ENST00000288022 GYPEP15421 78 aa17.39■□□□□ 0.37
PDF-201ENST00000288022 IGHV3-73A0A0B4J1V6 119 aa17.38■□□□□ 0.37
PDF-201ENST00000288022 DNLZQ5SXM8 178 aa17.38■□□□□ 0.37
PDF-201ENST00000288022 Q6ZR54 194 aa17.38■□□□□ 0.37
PDF-201ENST00000288022 MED9Q9NWA0 146 aa17.38■□□□□ 0.37
PDF-201ENST00000288022 MRPS16Q9Y3D3 137 aaKnown RBP17.38■□□□□ 0.37
PDF-201ENST00000288022 CIDEAO60543 219 aa17.37■□□□□ 0.37
PDF-201ENST00000288022 SRIP30626 198 aa17.37■□□□□ 0.37
PDF-201ENST00000288022 TAGLN2P37802 199 aaKnown RBP17.37■□□□□ 0.37
PDF-201ENST00000288022 CENPWQ5EE01 88 aa17.37■□□□□ 0.37
PDF-201ENST00000288022 SYT8Q8NBV8 401 aa17.37■□□□□ 0.37
PDF-201ENST00000288022 K7EQD1 137 aa17.36■□□□□ 0.37
PDF-201ENST00000288022 GATA1P15976 413 aaPredicted RBP17.36■□□□□ 0.37
PDF-201ENST00000288022 NEGR1Q7Z3B1 354 aa17.36■□□□□ 0.37
PDF-201ENST00000288022 Q9H8V8 135 aa17.36■□□□□ 0.37
PDF-201ENST00000288022 PHLDA3Q9Y5J5 127 aa17.36■□□□□ 0.37
PDF-201ENST00000288022 NBDYA0A0U1RRE5 68 aa17.35■□□□□ 0.37
PDF-201ENST00000288022 RAB19A4D1S5 217 aa17.35■□□□□ 0.37
PDF-201ENST00000288022 A8MWV9 139 aa17.35■□□□□ 0.37
PDF-201ENST00000288022 MGST1P10620 155 aaKnown RBP17.35■□□□□ 0.37
PDF-201ENST00000288022 GNG4P50150 75 aa17.35■□□□□ 0.37
PDF-201ENST00000288022 RPL19P84098 196 aaKnown RBP17.35■□□□□ 0.37
PDF-201ENST00000288022 UPK3BQ9BT76 320 aa17.35■□□□□ 0.37
PDF-201ENST00000288022 PIK3CD-AS1Q5SR53 167 aa17.34■□□□□ 0.37
PDF-201ENST00000288022 LOC100131303A0A0U1RQF7 123 aa17.33■□□□□ 0.36
PDF-201ENST00000288022 DMRTA1Q5VZB9 504 aa17.33■□□□□ 0.36
PDF-201ENST00000288022 PARLQ9H300 379 aa17.33■□□□□ 0.36
PDF-201ENST00000288022 M0R381 172 aa17.32■□□□□ 0.36
PDF-201ENST00000288022 SOHLH1Q5JUK2 328 aa17.32■□□□□ 0.36
PDF-201ENST00000288022 LYPD5Q6UWN5 251 aa17.32■□□□□ 0.36
PDF-201ENST00000288022 ZNF575Q86XF7 245 aa17.32■□□□□ 0.36
PDF-201ENST00000288022 SLC25A29Q8N8R3 303 aa17.32■□□□□ 0.36
PDF-201ENST00000288022 PRADC1Q9BSG0 188 aa17.32■□□□□ 0.36
PDF-201ENST00000288022 RHOHQ15669 191 aa17.31■□□□□ 0.36
PDF-201ENST00000288022 C1orf134Q5TEV5 83 aa17.31■□□□□ 0.36
PDF-201ENST00000288022 LINC00336Q6ZUF6 198 aa17.31■□□□□ 0.36
PDF-201ENST00000288022 DAZAP1Q96EP5 407 aaKnown RBP17.31■□□□□ 0.36
PDF-201ENST00000288022 JPT2Q9H910 190 aa17.31■□□□□ 0.36
PDF-201ENST00000288022 EPPK1P58107 5090 aaKnown RBP17.3■□□□□ 0.36
PDF-201ENST00000288022 TRBV6-4A0A1B0GX49 114 aa17.3■□□□□ 0.36
PDF-201ENST00000288022 ZFP82Q8N141 532 aa17.3■□□□□ 0.36
PDF-201ENST00000288022 SCRT2Q9NQ03 307 aa17.3■□□□□ 0.36
PDF-201ENST00000288022 RBFOX3A6NFN3 312 aa17.29■□□□□ 0.36
PDF-201ENST00000288022 RTL8CO15255 209 aa17.29■□□□□ 0.36
PDF-201ENST00000288022 NXPH4O95158 308 aa17.29■□□□□ 0.36
PDF-201ENST00000288022 IGLV2-8P01709 118 aa17.29■□□□□ 0.36
PDF-201ENST00000288022 ZFP2Q6ZN57 461 aa17.29■□□□□ 0.36
PDF-201ENST00000288022 SMIM12Q96EX1 92 aa17.29■□□□□ 0.36
PDF-201ENST00000288022 CXCL1P09341 107 aa17.28■□□□□ 0.36
PDF-201ENST00000288022 MED14OSP0DP75 135 aa17.28■□□□□ 0.36
PDF-201ENST00000288022 TTC32Q5I0X7 151 aa17.28■□□□□ 0.36
PDF-201ENST00000288022 SH2D6Q7Z4S9 175 aa17.28■□□□□ 0.36
PDF-201ENST00000288022 LYPD6BQ8NI32 183 aa17.28■□□□□ 0.36
PDF-201ENST00000288022 SAMD10Q9BYL1 202 aa17.28■□□□□ 0.36
PDF-201ENST00000288022 TRBV20OR9-2A0A075B6H5 130 aa17.27■□□□□ 0.36
PDF-201ENST00000288022 FAM74A4Q5TZK3 123 aa17.27■□□□□ 0.36
PDF-201ENST00000288022 PRSS29PA6NIE9 313 aa17.26■□□□□ 0.35
PDF-201ENST00000288022 RHODO00212 210 aa17.26■□□□□ 0.35
PDF-201ENST00000288022 SIVA1O15304 175 aa17.26■□□□□ 0.35
PDF-201ENST00000288022 BIN3Q9NQY0 253 aa17.26■□□□□ 0.35
PDF-201ENST00000288022 A0A087WWL8 130 aa17.25■□□□□ 0.35
PDF-201ENST00000288022 Q6ZSN1 163 aa17.25■□□□□ 0.35
PDF-201ENST00000288022 SFRP2Q96HF1 295 aa17.25■□□□□ 0.35
PDF-201ENST00000288022 DNAH10Q8IVF4 4471 aa17.25■□□□□ 0.35
PDF-201ENST00000288022 TOR2AQ5JU69 321 aa17.24■□□□□ 0.35
PDF-201ENST00000288022 UFSP1Q6NVU6 142 aa17.24■□□□□ 0.35
PDF-201ENST00000288022 C6orf223Q8N319 242 aa17.24■□□□□ 0.35
PDF-201ENST00000288022 OR2D3Q8NGH3 330 aa17.24■□□□□ 0.35
PDF-201ENST00000288022 OR10AG1Q8NH19 301 aa17.24■□□□□ 0.35
PDF-201ENST00000288022 EIF5A2Q9GZV4 153 aaKnown RBP17.24■□□□□ 0.35
PDF-201ENST00000288022 MUC21A0A0G2JKD1 596 aa17.23■□□□□ 0.35
PDF-201ENST00000288022 MUC21A0A140T8X8 626 aa17.23■□□□□ 0.35
PDF-201ENST00000288022 P01737 135 aa17.23■□□□□ 0.35
PDF-201ENST00000288022 CEBPGP53567 150 aa17.23■□□□□ 0.35
PDF-201ENST00000288022 C19orf71A6NCJ1 209 aa17.22■□□□□ 0.35
PDF-201ENST00000288022 TMEM250H0YL14 139 aa17.22■□□□□ 0.35
PDF-201ENST00000288022 SNAI2O43623 268 aa17.22■□□□□ 0.35
PDF-201ENST00000288022 OR5AL1P0C617 328 aa17.22■□□□□ 0.35
PDF-201ENST00000288022 RPS20P60866 119 aaKnown RBP17.22■□□□□ 0.35
PDF-201ENST00000288022 SSTP61278 116 aa17.22■□□□□ 0.35
PDF-201ENST00000288022 SPANXN1Q5VSR9 72 aa17.22■□□□□ 0.35
PDF-201ENST00000288022 KRTAP1-5Q9BYS1 174 aa17.22■□□□□ 0.35
PDF-201ENST00000288022 A0A1W2PPQ1 181 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms