RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 DNAJC30Q96LL9 226 aa5.92□□□□□ -1.46
TPM3-201ENST00000271850 Q9HAA7 133 aa5.92□□□□□ -1.46
TPM3-201ENST00000271850 KCNIP2Q9NS61 270 aa5.92□□□□□ -1.46
TPM3-201ENST00000271850 MBD2Q9UBB5 411 aa5.92□□□□□ -1.46
TPM3-201ENST00000271850 PGPEP1LA6NFU8 196 aa5.91□□□□□ -1.46
TPM3-201ENST00000271850 C17orf112F2Z3M2 114 aa5.91□□□□□ -1.46
TPM3-201ENST00000271850 PPT1P50897 306 aa5.91□□□□□ -1.46
TPM3-201ENST00000271850 ZNF506Q5JVG8 444 aa5.91□□□□□ -1.46
TPM3-201ENST00000271850 NHLRC2Q8NBF2 726 aa5.91□□□□□ -1.46
TPM3-201ENST00000271850 TREM1Q9NP99 234 aa5.91□□□□□ -1.46
TPM3-201ENST00000271850 TRBV6-4A0A1B0GX49 114 aa5.9□□□□□ -1.46
TPM3-201ENST00000271850 FBLL1A6NHQ2 334 aaKnown RBP5.9□□□□□ -1.46
TPM3-201ENST00000271850 INMT-MINDY4F8WBC2 141 aa5.9□□□□□ -1.46
TPM3-201ENST00000271850 UPK1BO75841 260 aa5.9□□□□□ -1.46
TPM3-201ENST00000271850 RPL12P30050 165 aaKnown RBP5.9□□□□□ -1.46
TPM3-201ENST00000271850 ZNF876PQ49A33 203 aa5.9□□□□□ -1.46
TPM3-201ENST00000271850 LINC01620Q4KN68 170 aa5.9□□□□□ -1.46
TPM3-201ENST00000271850 LELP1Q5T871 98 aa5.9□□□□□ -1.46
TPM3-201ENST00000271850 UFSP1Q6NVU6 142 aa5.9□□□□□ -1.46
TPM3-201ENST00000271850 MZT2BQ6NZ67 158 aa5.9□□□□□ -1.46
TPM3-201ENST00000271850 SUN5Q8TC36 379 aa5.9□□□□□ -1.46
TPM3-201ENST00000271850 ASB13Q8WXK3 278 aa5.9□□□□□ -1.46
TPM3-201ENST00000271850 MARVELD1Q9BSK0 173 aa5.9□□□□□ -1.46
TPM3-201ENST00000271850 SDF2L1Q9HCN8 221 aa5.9□□□□□ -1.46
TPM3-201ENST00000271850 UBR4Q5T4S7 5183 aa5.9□□□□□ -1.47
TPM3-201ENST00000271850 IGKV3D-20A0A0C4DH25 116 aa5.89□□□□□ -1.47
TPM3-201ENST00000271850 GGTLC3B5MD39 225 aa5.89□□□□□ -1.47
TPM3-201ENST00000271850 LECT2O14960 151 aa5.89□□□□□ -1.47
TPM3-201ENST00000271850 PSCAO43653 123 aa5.89□□□□□ -1.47
TPM3-201ENST00000271850 TCRAP04437 139 aa5.89□□□□□ -1.47
TPM3-201ENST00000271850 STAG3L2P0CL84 134 aa5.89□□□□□ -1.47
TPM3-201ENST00000271850 STAG3L3P0CL85 134 aa5.89□□□□□ -1.47
TPM3-201ENST00000271850 ARL14EPLP0DKL9 152 aa5.89□□□□□ -1.47
TPM3-201ENST00000271850 TAS2R45P59539 299 aa5.89□□□□□ -1.47
TPM3-201ENST00000271850 RHOHQ15669 191 aa5.89□□□□□ -1.47
TPM3-201ENST00000271850 OR10J3Q5JRS4 329 aa5.89□□□□□ -1.47
TPM3-201ENST00000271850 PQLC2Q6ZP29 291 aa5.89□□□□□ -1.47
TPM3-201ENST00000271850 LINC00299Q6ZSB3 139 aa5.89□□□□□ -1.47
TPM3-201ENST00000271850 SH2D6Q7Z4S9 175 aa5.89□□□□□ -1.47
TPM3-201ENST00000271850 ARL6IP6Q8N6S5 226 aa5.89□□□□□ -1.47
TPM3-201ENST00000271850 ENKURQ8TC29 256 aa5.89□□□□□ -1.47
TPM3-201ENST00000271850 JPT2Q9H910 190 aa5.89□□□□□ -1.47
TPM3-201ENST00000271850 KRTAP29-1A8MX34 341 aaPredicted RBP5.88□□□□□ -1.47
TPM3-201ENST00000271850 GCGP01275 180 aa5.88□□□□□ -1.47
TPM3-201ENST00000271850 C1QBP02746 253 aa5.88□□□□□ -1.47
TPM3-201ENST00000271850 PFN1P07737 140 aaKnown RBP5.88□□□□□ -1.47
TPM3-201ENST00000271850 CYCSP99999 105 aaKnown RBP5.88□□□□□ -1.47
TPM3-201ENST00000271850 LAGE3Q14657 143 aa5.88□□□□□ -1.47
TPM3-201ENST00000271850 DAZ4Q86SG3 579 aaKnown RBP5.88□□□□□ -1.47
TPM3-201ENST00000271850 CMTM2Q8TAZ6 248 aa5.88□□□□□ -1.47
TPM3-201ENST00000271850 PTH2Q96A98 100 aa5.88□□□□□ -1.47
TPM3-201ENST00000271850 LINC00479Q96M42 142 aa5.88□□□□□ -1.47
TPM3-201ENST00000271850 SAMD10Q9BYL1 202 aa5.88□□□□□ -1.47
TPM3-201ENST00000271850 GTSF1LQ9H1H1 148 aa5.88□□□□□ -1.47
TPM3-201ENST00000271850 PARLQ9H300 379 aa5.88□□□□□ -1.47
TPM3-201ENST00000271850 DAZ3Q9NR90 486 aaKnown RBP5.88□□□□□ -1.47
TPM3-201ENST00000271850 NDUFA13Q9P0J0 144 aa5.88□□□□□ -1.47
TPM3-201ENST00000271850 PSG8Q9UQ74 426 aa5.88□□□□□ -1.47
TPM3-201ENST00000271850 TRAV8-6A0A0B4J262 113 aa5.87□□□□□ -1.47
TPM3-201ENST00000271850 ACOT6Q3I5F7 207 aaPredicted RBP5.87□□□□□ -1.47
TPM3-201ENST00000271850 SCXQ7RTU7 201 aa5.87□□□□□ -1.47
TPM3-201ENST00000271850 C14orf178Q8N769 122 aaPredicted RBP5.87□□□□□ -1.47
TPM3-201ENST00000271850 OR10G9Q8NGN4 311 aa5.87□□□□□ -1.47
TPM3-201ENST00000271850 OR10G7Q8NGN6 311 aa5.87□□□□□ -1.47
TPM3-201ENST00000271850 OR2G3Q8NGZ4 309 aa5.87□□□□□ -1.47
TPM3-201ENST00000271850 ATP6V0E2Q8NHE4 81 aa5.87□□□□□ -1.47
TPM3-201ENST00000271850 SCGB1C1Q8TD33 95 aa5.87□□□□□ -1.47
TPM3-201ENST00000271850 KCNS1Q96KK3 526 aa5.87□□□□□ -1.47
TPM3-201ENST00000271850 PRADC1Q9BSG0 188 aa5.87□□□□□ -1.47
TPM3-201ENST00000271850 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.86□□□□□ -1.47
TPM3-201ENST00000271850 GAGE12JA6NER3 117 aa5.86□□□□□ -1.47
TPM3-201ENST00000271850 MGST1P10620 155 aaKnown RBP5.86□□□□□ -1.47
TPM3-201ENST00000271850 GCHFRP30047 84 aa5.86□□□□□ -1.47
TPM3-201ENST00000271850 CDC34P49427 236 aaPredicted RBP5.86□□□□□ -1.47
TPM3-201ENST00000271850 CRIP1P50238 77 aa5.86□□□□□ -1.47
TPM3-201ENST00000271850 GAGE1Q13065 139 aa5.86□□□□□ -1.47
TPM3-201ENST00000271850 GAGE4Q13068 117 aa5.86□□□□□ -1.47
TPM3-201ENST00000271850 GAGE5Q13069 117 aa5.86□□□□□ -1.47
TPM3-201ENST00000271850 GAGE13Q4V321 117 aa5.86□□□□□ -1.47
TPM3-201ENST00000271850 Q5BKY6 102 aa5.86□□□□□ -1.47
TPM3-201ENST00000271850 C5orf17Q8NAS9 161 aa5.86□□□□□ -1.47
TPM3-201ENST00000271850 S100ZQ8WXG8 99 aa5.86□□□□□ -1.47
TPM3-201ENST00000271850 RAB24Q969Q5 203 aa5.86□□□□□ -1.47
TPM3-201ENST00000271850 SH3BGRL3Q9H299 93 aa5.86□□□□□ -1.47
TPM3-201ENST00000271850 TRAV34A0A0B4J273 112 aa5.85□□□□□ -1.47
TPM3-201ENST00000271850 A0A1W2PPV4 95 aa5.85□□□□□ -1.47
TPM3-201ENST00000271850 TAAR5O14804 337 aa5.85□□□□□ -1.47
TPM3-201ENST00000271850 SSNA1O43805 119 aa5.85□□□□□ -1.47
TPM3-201ENST00000271850 ATP6V0CP27449 155 aa5.85□□□□□ -1.47
TPM3-201ENST00000271850 SUMO1P63165 101 aaKnown RBP5.85□□□□□ -1.47
TPM3-201ENST00000271850 FLI1Q01543 452 aaPredicted RBP5.85□□□□□ -1.47
TPM3-201ENST00000271850 ZNF726P1Q15940 193 aa5.85□□□□□ -1.47
TPM3-201ENST00000271850 FAM74A1Q5RGS3 127 aa5.85□□□□□ -1.47
TPM3-201ENST00000271850 PRNTQ86SH4 94 aa5.85□□□□□ -1.47
TPM3-201ENST00000271850 HSD17B11Q8NBQ5 300 aa5.85□□□□□ -1.47
TPM3-201ENST00000271850 BAALCQ8WXS3 180 aa5.85□□□□□ -1.47
TPM3-201ENST00000271850 EPDR1Q9UM22 224 aa5.85□□□□□ -1.47
TPM3-201ENST00000271850 SERTM2A0A1B0GWG4 89 aa5.84□□□□□ -1.47
TPM3-201ENST00000271850 CIDEAO60543 219 aa5.84□□□□□ -1.47
TPM3-201ENST00000271850 PET100P0DJ07 73 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms