RNA–Protein interactions for RNA: ENST00000262768.11

TIMP2-201, Transcript of TIMP metallopeptidase inhibitor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP2, Length 3,652 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP2-201ENST00000262768 IGLC3P0DOY3 106 aa11.47□□□□□ -0.57
TIMP2-201ENST00000262768 RPL35AP18077 110 aaKnown RBP11.47□□□□□ -0.57
TIMP2-201ENST00000262768 ZNF876PQ49A33 203 aa11.47□□□□□ -0.57
TIMP2-201ENST00000262768 OR1N2Q8NGR9 330 aa11.47□□□□□ -0.57
TIMP2-201ENST00000262768 APCP25054 2843 aa11.47□□□□□ -0.57
TIMP2-201ENST00000262768 IGHV3-64A0A075B6Q5 118 aa11.46□□□□□ -0.57
TIMP2-201ENST00000262768 TEX43Q6ZNM6 134 aa11.46□□□□□ -0.57
TIMP2-201ENST00000262768 VPS13CQ709C8 3753 aa11.46□□□□□ -0.57
TIMP2-201ENST00000262768 SCGB1D4Q6XE38 83 aa11.46□□□□□ -0.58
TIMP2-201ENST00000262768 SFTA2Q6UW10 78 aa11.45□□□□□ -0.58
TIMP2-201ENST00000262768 SPATA12Q7Z6I5 190 aa11.45□□□□□ -0.58
TIMP2-201ENST00000262768 CSTL1Q9H114 145 aa11.45□□□□□ -0.58
TIMP2-201ENST00000262768 IGKV3OR2-268A0A0C4DH90 116 aa11.45□□□□□ -0.58
TIMP2-201ENST00000262768 NPIPB6E9PJ23 425 aa11.45□□□□□ -0.58
TIMP2-201ENST00000262768 RAX2Q96IS3 184 aa11.44□□□□□ -0.58
TIMP2-201ENST00000262768 URB1-AS1Q96HZ7 61 aa11.44□□□□□ -0.58
TIMP2-201ENST00000262768 C2orf70A6NJV1 201 aa11.44□□□□□ -0.58
TIMP2-201ENST00000262768 KLF5Q13887 457 aaPredicted RBP11.44□□□□□ -0.58
TIMP2-201ENST00000262768 KIR2DL4Q99706 377 aa11.44□□□□□ -0.58
TIMP2-201ENST00000262768 ZNF747Q9BV97 191 aa11.44□□□□□ -0.58
TIMP2-201ENST00000262768 NXT2Q9NPJ8 142 aaKnown RBP11.44□□□□□ -0.58
TIMP2-201ENST00000262768 UBR5O95071 2799 aaPredicted RBP11.43□□□□□ -0.58
TIMP2-201ENST00000262768 J3QLI3 93 aa11.43□□□□□ -0.58
TIMP2-201ENST00000262768 K7EMI3 77 aa11.43□□□□□ -0.58
TIMP2-201ENST00000262768 PF4P02776 101 aa11.43□□□□□ -0.58
TIMP2-201ENST00000262768 RNF151Q2KHN1 245 aa11.43□□□□□ -0.58
TIMP2-201ENST00000262768 TMEM170BQ5T4T1 132 aa11.43□□□□□ -0.58
TIMP2-201ENST00000262768 MDFICQ9P1T7 246 aa11.43□□□□□ -0.58
TIMP2-201ENST00000262768 PPBPP02775 128 aa11.43□□□□□ -0.58
TIMP2-201ENST00000262768 CFHR3Q02985 330 aa11.43□□□□□ -0.58
TIMP2-201ENST00000262768 PET117Q6UWS5 81 aa11.43□□□□□ -0.58
TIMP2-201ENST00000262768 TMEM61Q8N0U2 210 aa11.43□□□□□ -0.58
TIMP2-201ENST00000262768 ZNF418Q8TF45 676 aaPredicted RBP11.43□□□□□ -0.58
TIMP2-201ENST00000262768 NBEAL2Q6ZNJ1 2754 aa11.43□□□□□ -0.58
TIMP2-201ENST00000262768 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.42□□□□□ -0.58
TIMP2-201ENST00000262768 ZC2HC1BQ5TFG8 222 aa11.42□□□□□ -0.58
TIMP2-201ENST00000262768 STHQ8IWL8 128 aa11.42□□□□□ -0.58
TIMP2-201ENST00000262768 PEMTQ9UBM1 199 aa11.42□□□□□ -0.58
TIMP2-201ENST00000262768 LGALS1P09382 135 aaKnown RBP11.42□□□□□ -0.58
TIMP2-201ENST00000262768 PHLDA1Q8WV24 401 aaPredicted RBP11.42□□□□□ -0.58
TIMP2-201ENST00000262768 DPH3P1Q9H4G8 78 aa11.42□□□□□ -0.58
TIMP2-201ENST00000262768 LAGE3Q14657 143 aa11.42□□□□□ -0.58
TIMP2-201ENST00000262768 DGAT2L7PQ6IED9 249 aa11.42□□□□□ -0.58
TIMP2-201ENST00000262768 SYT8Q8NBV8 401 aa11.42□□□□□ -0.58
TIMP2-201ENST00000262768 LINC01619G3V211 115 aa11.41□□□□□ -0.58
TIMP2-201ENST00000262768 DLX4Q92988 240 aaPredicted RBP11.41□□□□□ -0.58
TIMP2-201ENST00000262768 C20orf144Q9BQM9 153 aa11.41□□□□□ -0.58
TIMP2-201ENST00000262768 CD300EQ496F6 205 aaPredicted RBP11.41□□□□□ -0.58
TIMP2-201ENST00000262768 OR4C5Q8NGB2 326 aa11.41□□□□□ -0.58
TIMP2-201ENST00000262768 ST20Q9HBF5 79 aa11.41□□□□□ -0.58
TIMP2-201ENST00000262768 CDKN1BP46527 198 aa11.4□□□□□ -0.58
TIMP2-201ENST00000262768 IGHV3-38A0A0C4DH36 116 aa11.4□□□□□ -0.58
TIMP2-201ENST00000262768 KIR2DL5BA0A0G2JN68 375 aa11.4□□□□□ -0.58
TIMP2-201ENST00000262768 KIR2DL5BA0A0G2JPC4 375 aa11.4□□□□□ -0.58
TIMP2-201ENST00000262768 C9orf47Q6ZRZ4 202 aa11.4□□□□□ -0.58
TIMP2-201ENST00000262768 KIR2DL5AQ8N109 375 aa11.4□□□□□ -0.58
TIMP2-201ENST00000262768 ELANEP08246 267 aa11.4□□□□□ -0.58
TIMP2-201ENST00000262768 PSMB8P28062 276 aa11.4□□□□□ -0.58
TIMP2-201ENST00000262768 LINC01559Q495D7 138 aa11.4□□□□□ -0.58
TIMP2-201ENST00000262768 TMEM97Q5BJF2 176 aa11.4□□□□□ -0.58
TIMP2-201ENST00000262768 RNASE13Q5GAN3 156 aaKnown RBP11.4□□□□□ -0.58
TIMP2-201ENST00000262768 ARL6IP6Q8N6S5 226 aa11.4□□□□□ -0.58
TIMP2-201ENST00000262768 SUMO2P61956 95 aaKnown RBP11.39□□□□□ -0.59
TIMP2-201ENST00000262768 Q8N1Y9 231 aa11.39□□□□□ -0.59
TIMP2-201ENST00000262768 SRSF9Q13242 221 aaKnown RBP eCLIP11.39□□□□□ -0.59
TIMP2-201ENST00000262768 Q6YL49 198 aa11.39□□□□□ -0.59
TIMP2-201ENST00000262768 CITED2Q99967 270 aaPredicted RBP11.39□□□□□ -0.59
TIMP2-201ENST00000262768 ESDP10768 282 aa11.39□□□□□ -0.59
TIMP2-201ENST00000262768 ANKRD39Q53RE8 183 aa11.39□□□□□ -0.59
TIMP2-201ENST00000262768 DNLZQ5SXM8 178 aa11.39□□□□□ -0.59
TIMP2-201ENST00000262768 PCP2Q8IVA1 136 aa11.39□□□□□ -0.59
TIMP2-201ENST00000262768 ZFAND2AQ8N6M9 145 aa11.39□□□□□ -0.59
TIMP2-201ENST00000262768 SETXQ7Z333 2677 aaKnown RBP11.38□□□□□ -0.59
TIMP2-201ENST00000262768 DNAJC9-AS1A6NH13 148 aa11.38□□□□□ -0.59
TIMP2-201ENST00000262768 NUTF2P61970 127 aaKnown RBP11.38□□□□□ -0.59
TIMP2-201ENST00000262768 MRPL35Q9NZE8 188 aaKnown RBP11.38□□□□□ -0.59
TIMP2-201ENST00000262768 IGLC6P0CF74 106 aa11.38□□□□□ -0.59
TIMP2-201ENST00000262768 H3BUA1 57 aa11.38□□□□□ -0.59
TIMP2-201ENST00000262768 CTRLP40313 264 aa11.37□□□□□ -0.59
TIMP2-201ENST00000262768 TRGV1A0A0A0MS02 117 aa11.37□□□□□ -0.59
TIMP2-201ENST00000262768 RBAKDNA6NC62 111 aa11.37□□□□□ -0.59
TIMP2-201ENST00000262768 CD28P10747 220 aa11.37□□□□□ -0.59
TIMP2-201ENST00000262768 LINC00469Q8N7U9 141 aa11.37□□□□□ -0.59
TIMP2-201ENST00000262768 ZNF702PQ9H963 129 aa11.37□□□□□ -0.59
TIMP2-201ENST00000262768 GPHB5Q86YW7 130 aa11.37□□□□□ -0.59
TIMP2-201ENST00000262768 DUSP14O95147 198 aaKnown RBP11.36□□□□□ -0.59
TIMP2-201ENST00000262768 IGLV1-40P01703 118 aa11.36□□□□□ -0.59
TIMP2-201ENST00000262768 IGKCP01834 107 aa11.36□□□□□ -0.59
TIMP2-201ENST00000262768 TNFRSF18Q9Y5U5 241 aa11.36□□□□□ -0.59
TIMP2-201ENST00000262768 IGHV1OR15-1A0A075B7D0 117 aa11.36□□□□□ -0.59
TIMP2-201ENST00000262768 H7C2G1 150 aa11.36□□□□□ -0.59
TIMP2-201ENST00000262768 ATP5LO75964 103 aa11.36□□□□□ -0.59
TIMP2-201ENST00000262768 C2orf66Q6UXQ4 117 aa11.36□□□□□ -0.59
TIMP2-201ENST00000262768 HIST1H4GQ99525 98 aa11.36□□□□□ -0.59
TIMP2-201ENST00000262768 MRPL16Q9NX20 251 aaKnown RBP11.36□□□□□ -0.59
TIMP2-201ENST00000262768 OR9G4Q8NGQ1 327 aa11.36□□□□□ -0.59
TIMP2-201ENST00000262768 SDHAF1A6NFY7 115 aa11.35□□□□□ -0.59
TIMP2-201ENST00000262768 CCL24O00175 119 aa11.35□□□□□ -0.59
TIMP2-201ENST00000262768 DPM2O94777 84 aa11.35□□□□□ -0.59
TIMP2-201ENST00000262768 RPL39P62891 51 aaKnown RBP11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 201.6 ms