RNA–Protein interactions for RNA: ENST00000261367.11

SNCAIP-201, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SNCAIP, Length 4,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-201ENST00000261367 C17orf58Q2M2W7 97 aa6.55□□□□□ -1.36
SNCAIP-201ENST00000261367 C6orf226Q5I0X4 101 aa6.55□□□□□ -1.36
SNCAIP-201ENST00000261367 MLST8Q9BVC4 326 aa6.55□□□□□ -1.36
SNCAIP-201ENST00000261367 SERP1Q9Y6X1 66 aa6.55□□□□□ -1.36
SNCAIP-201ENST00000261367 COX7A2LO14548 114 aa6.54□□□□□ -1.36
SNCAIP-201ENST00000261367 S4R3C0 116 aa6.54□□□□□ -1.36
SNCAIP-201ENST00000261367 IGHV3OR16-13A0A075B7E8 117 aa6.54□□□□□ -1.36
SNCAIP-201ENST00000261367 IGHV3-74A0A0B4J1X5 117 aa6.54□□□□□ -1.36
SNCAIP-201ENST00000261367 TRAV25A0A0B4J276 109 aa6.54□□□□□ -1.36
SNCAIP-201ENST00000261367 EPOPA6NHQ4 379 aa6.54□□□□□ -1.36
SNCAIP-201ENST00000261367 LY6DQ14210 128 aa6.54□□□□□ -1.36
SNCAIP-201ENST00000261367 ZNF625Q96I27 306 aaPredicted RBP6.54□□□□□ -1.36
SNCAIP-201ENST00000261367 IGHV3-35A0A0C4DH35 117 aa6.54□□□□□ -1.36
SNCAIP-201ENST00000261367 DMXL2Q8TDJ6 3036 aa6.53□□□□□ -1.36
SNCAIP-201ENST00000261367 IGKV3OR2-268A0A0C4DH90 116 aa6.53□□□□□ -1.36
SNCAIP-201ENST00000261367 A0A0U1RRA0 63 aa6.53□□□□□ -1.36
SNCAIP-201ENST00000261367 LINC00694P0DN24 101 aa6.53□□□□□ -1.36
SNCAIP-201ENST00000261367 SS18Q15532 418 aa6.53□□□□□ -1.36
SNCAIP-201ENST00000261367 FAM201AQ5SY85 155 aa6.53□□□□□ -1.36
SNCAIP-201ENST00000261367 GDF5OSQ5U4N7 250 aa6.53□□□□□ -1.36
SNCAIP-201ENST00000261367 RNF138Q8WVD3 245 aa6.53□□□□□ -1.36
SNCAIP-201ENST00000261367 ZNF462Q96JM2 2506 aa6.53□□□□□ -1.36
SNCAIP-201ENST00000261367 DOCK11Q5JSL3 2073 aa6.53□□□□□ -1.36
SNCAIP-201ENST00000261367 TMEM178BH3BS89 294 aa6.53□□□□□ -1.36
SNCAIP-201ENST00000261367 MIAQ16674 131 aa6.53□□□□□ -1.36
SNCAIP-201ENST00000261367 ZFP2Q6ZN57 461 aa6.53□□□□□ -1.36
SNCAIP-201ENST00000261367 ZNF491Q8N8L2 437 aa6.53□□□□□ -1.36
SNCAIP-201ENST00000261367 TRAV26-2A0A0B4J265 109 aa6.53□□□□□ -1.36
SNCAIP-201ENST00000261367 SPG11Q96JI7 2443 aa6.53□□□□□ -1.36
SNCAIP-201ENST00000261367 TRAV41A0A0B4J266 112 aa6.52□□□□□ -1.36
SNCAIP-201ENST00000261367 ZNF134P52741 427 aa6.52□□□□□ -1.36
SNCAIP-201ENST00000261367 CUL9Q8IWT3 2517 aa6.52□□□□□ -1.37
SNCAIP-201ENST00000261367 IGHV3-49A0A0A0MS15 119 aa6.52□□□□□ -1.37
SNCAIP-201ENST00000261367 FRMD6-AS1P0C7T7 363 aa6.52□□□□□ -1.37
SNCAIP-201ENST00000261367 LINC00310P59036 64 aa6.52□□□□□ -1.37
SNCAIP-201ENST00000261367 GPR179Q6PRD1 2367 aa6.52□□□□□ -1.37
SNCAIP-201ENST00000261367 C11orf44Q8N8P7 122 aa6.52□□□□□ -1.37
SNCAIP-201ENST00000261367 MDFICQ9P1T7 246 aa6.52□□□□□ -1.37
SNCAIP-201ENST00000261367 DOPEY1Q5JWR5 2465 aa6.52□□□□□ -1.37
SNCAIP-201ENST00000261367 TMEM131Q92545 1883 aa6.52□□□□□ -1.37
SNCAIP-201ENST00000261367 F8WEM9 126 aa6.52□□□□□ -1.37
SNCAIP-201ENST00000261367 TMEM256-PLSCR3K7ERE1 68 aa6.52□□□□□ -1.37
SNCAIP-201ENST00000261367 PATE2Q6UY27 113 aa6.52□□□□□ -1.37
SNCAIP-201ENST00000261367 SMG1Q96Q15 3661 aaKnown RBP6.52□□□□□ -1.37
SNCAIP-201ENST00000261367 ZNF407Q9C0G0 2248 aa6.51□□□□□ -1.37
SNCAIP-201ENST00000261367 IGKV3D-7A0A0C4DH55 119 aa6.51□□□□□ -1.37
SNCAIP-201ENST00000261367 NBL1P41271 181 aa6.51□□□□□ -1.37
SNCAIP-201ENST00000261367 LINC00205P59089 165 aa6.51□□□□□ -1.37
SNCAIP-201ENST00000261367 ZNF295-AS1Q8N0V1 137 aa6.51□□□□□ -1.37
SNCAIP-201ENST00000261367 IGHV1OR15-1A0A075B7D0 117 aa6.51□□□□□ -1.37
SNCAIP-201ENST00000261367 TRAV4A0A0B4J268 109 aa6.51□□□□□ -1.37
SNCAIP-201ENST00000261367 TIMM17BO60830 172 aa6.51□□□□□ -1.37
SNCAIP-201ENST00000261367 NEXN-AS1Q8NBZ9 246 aa6.51□□□□□ -1.37
SNCAIP-201ENST00000261367 PRO0628Q9UI54 55 aa6.51□□□□□ -1.37
SNCAIP-201ENST00000261367 NUP210LQ5VU65 1888 aa6.51□□□□□ -1.37
SNCAIP-201ENST00000261367 DIDO1Q9BTC0 2240 aaKnown RBP6.51□□□□□ -1.37
SNCAIP-201ENST00000261367 TRBV7-3A0A075B6L6 115 aa6.51□□□□□ -1.37
SNCAIP-201ENST00000261367 A0A087WWL8 130 aa6.51□□□□□ -1.37
SNCAIP-201ENST00000261367 TEX49A0A1B0GTD5 131 aa6.51□□□□□ -1.37
SNCAIP-201ENST00000261367 IGLV2-14P01704 120 aa6.51□□□□□ -1.37
SNCAIP-201ENST00000261367 ZNF883P0CG24 379 aa6.51□□□□□ -1.37
SNCAIP-201ENST00000261367 Q6JHZ5 121 aa6.51□□□□□ -1.37
SNCAIP-201ENST00000261367 SVILO95425 2214 aa6.51□□□□□ -1.37
SNCAIP-201ENST00000261367 TRGV2A0A075B6R0 118 aa6.5□□□□□ -1.37
SNCAIP-201ENST00000261367 IGHV1-58A0A0C4DH39 117 aa6.5□□□□□ -1.37
SNCAIP-201ENST00000261367 IGHV3-33P01772 117 aa6.5□□□□□ -1.37
SNCAIP-201ENST00000261367 DAD1P61803 113 aa6.5□□□□□ -1.37
SNCAIP-201ENST00000261367 WDR86Q86TI4 376 aa6.5□□□□□ -1.37
SNCAIP-201ENST00000261367 ZNF71Q9NQZ8 489 aaPredicted RBP6.5□□□□□ -1.37
SNCAIP-201ENST00000261367 IGKV3-20P01619 116 aa6.5□□□□□ -1.37
SNCAIP-201ENST00000261367 DYNAPQ8N1N2 210 aa6.5□□□□□ -1.37
SNCAIP-201ENST00000261367 CFHR4Q92496 578 aa6.5□□□□□ -1.37
SNCAIP-201ENST00000261367 NDUFA4O00483 81 aa6.5□□□□□ -1.37
SNCAIP-201ENST00000261367 INSP01308 110 aa6.5□□□□□ -1.37
SNCAIP-201ENST00000261367 C1orf159Q96HA4 380 aa6.5□□□□□ -1.37
SNCAIP-201ENST00000261367 WNK1Q9H4A3 2382 aa6.5□□□□□ -1.37
SNCAIP-201ENST00000261367 DMXL1Q9Y485 3027 aa6.5□□□□□ -1.37
SNCAIP-201ENST00000261367 TRAV12-2A0A075B6T6 113 aa6.49□□□□□ -1.37
SNCAIP-201ENST00000261367 A0A0J9YY99 117 aa6.49□□□□□ -1.37
SNCAIP-201ENST00000261367 TINCRA0A1B0GVN0 87 aa6.49□□□□□ -1.37
SNCAIP-201ENST00000261367 FAM19A5Q7Z5A7 132 aaPredicted RBP6.49□□□□□ -1.37
SNCAIP-201ENST00000261367 C9orf106Q8NAJ2 232 aa6.49□□□□□ -1.37
SNCAIP-201ENST00000261367 TTTY13Q9BZ97 58 aa6.49□□□□□ -1.37
SNCAIP-201ENST00000261367 DAZ1Q9NQZ3 744 aaKnown RBP6.49□□□□□ -1.37
SNCAIP-201ENST00000261367 RNF114Q9Y508 228 aa6.49□□□□□ -1.37
SNCAIP-201ENST00000261367 BDP1A6H8Y1 2624 aa6.49□□□□□ -1.37
SNCAIP-201ENST00000261367 ESPL1Q14674 2120 aa6.49□□□□□ -1.37
SNCAIP-201ENST00000261367 THADAQ6YHU6 1953 aa6.49□□□□□ -1.37
SNCAIP-201ENST00000261367 TFF1P04155 84 aa6.49□□□□□ -1.37
SNCAIP-201ENST00000261367 PKIGQ9Y2B9 76 aa6.49□□□□□ -1.37
SNCAIP-201ENST00000261367 A0A0J9YX75 114 aa6.49□□□□□ -1.37
SNCAIP-201ENST00000261367 C3orf56Q8N813 242 aa6.49□□□□□ -1.37
SNCAIP-201ENST00000261367 KLHL30-AS1Q8NEE0 82 aa6.49□□□□□ -1.37
SNCAIP-201ENST00000261367 NAV3Q8IVL0 2385 aa6.49□□□□□ -1.37
SNCAIP-201ENST00000261367 WI2-2373I1.2A0A1W2PRP0 233 aa6.49□□□□□ -1.37
SNCAIP-201ENST00000261367 EIF4EBP1Q13541 118 aaPredicted RBP6.49□□□□□ -1.37
SNCAIP-201ENST00000261367 PRORYQ9H606 182 aa6.49□□□□□ -1.37
SNCAIP-201ENST00000261367 Q9H8V8 135 aa6.49□□□□□ -1.37
SNCAIP-201ENST00000261367 MRPS12O15235 138 aaKnown RBP6.48□□□□□ -1.37
SNCAIP-201ENST00000261367 MP68P56378 58 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms