RNA–Protein interactions for RNA: ENST00000225655.5

PFN1-201, Transcript of profilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFN1, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN1-201ENST00000225655 TRGV1A0A0A0MS02 117 aa12.67□□□□□ -0.38
PFN1-201ENST00000225655 IGKV3D-20A0A0C4DH25 116 aa12.67□□□□□ -0.38
PFN1-201ENST00000225655 PGPEP1LA6NFU8 196 aa12.67□□□□□ -0.38
PFN1-201ENST00000225655 KRBOX1C9JBD0 128 aa12.67□□□□□ -0.38
PFN1-201ENST00000225655 M0R2N4 97 aa12.67□□□□□ -0.38
PFN1-201ENST00000225655 OCC1Q8TAD7 63 aa12.67□□□□□ -0.38
PFN1-201ENST00000225655 MDFICQ9P1T7 246 aa12.67□□□□□ -0.38
PFN1-201ENST00000225655 TRGV2A0A075B6R0 118 aa12.66□□□□□ -0.38
PFN1-201ENST00000225655 TMSB15BA0A087X1C1 80 aa12.66□□□□□ -0.38
PFN1-201ENST00000225655 A0A1B0GVY2 172 aa12.66□□□□□ -0.38
PFN1-201ENST00000225655 RTL8CO15255 209 aa12.66□□□□□ -0.38
PFN1-201ENST00000225655 SFTA3P0C7M3 94 aa12.66□□□□□ -0.38
PFN1-201ENST00000225655 Q6ZR54 194 aa12.66□□□□□ -0.38
PFN1-201ENST00000225655 COMMD7Q86VX2 200 aa12.66□□□□□ -0.38
PFN1-201ENST00000225655 C15orf53Q8NAA6 179 aa12.66□□□□□ -0.38
PFN1-201ENST00000225655 NAT8Q9UHE5 227 aa12.66□□□□□ -0.38
PFN1-201ENST00000225655 NACAE9PAV3 2078 aa12.65□□□□□ -0.38
PFN1-201ENST00000225655 C9JQL5 133 aa12.65□□□□□ -0.38
PFN1-201ENST00000225655 M0R2P5 195 aa12.65□□□□□ -0.38
PFN1-201ENST00000225655 CXCL1P09341 107 aa12.65□□□□□ -0.38
PFN1-201ENST00000225655 OR2D3Q8NGH3 330 aa12.65□□□□□ -0.38
PFN1-201ENST00000225655 IGLV2-18A0A075B6J9 118 aa12.64□□□□□ -0.39
PFN1-201ENST00000225655 GAGE12BA1L429 117 aa12.64□□□□□ -0.39
PFN1-201ENST00000225655 C19orf71A6NCJ1 209 aa12.64□□□□□ -0.39
PFN1-201ENST00000225655 PRSS29PA6NIE9 313 aa12.64□□□□□ -0.39
PFN1-201ENST00000225655 SPINK4O60575 86 aa12.64□□□□□ -0.39
PFN1-201ENST00000225655 GAGE7O76087 117 aa12.64□□□□□ -0.39
PFN1-201ENST00000225655 GAGE12FP0CL80 117 aa12.64□□□□□ -0.39
PFN1-201ENST00000225655 GAGE12GP0CL81 117 aa12.64□□□□□ -0.39
PFN1-201ENST00000225655 GAGE12IP0CL82 117 aa12.64□□□□□ -0.39
PFN1-201ENST00000225655 ERVFC1-1P60608 527 aa12.64□□□□□ -0.39
PFN1-201ENST00000225655 DNLZQ5SXM8 178 aa12.64□□□□□ -0.39
PFN1-201ENST00000225655 LINC01551Q86U37 167 aa12.64□□□□□ -0.39
PFN1-201ENST00000225655 IL36BQ9NZH7 164 aa12.64□□□□□ -0.39
PFN1-201ENST00000225655 GRIFINA4D1Z8 144 aa12.63□□□□□ -0.39
PFN1-201ENST00000225655 LINC00862A6NCI5 91 aa12.63□□□□□ -0.39
PFN1-201ENST00000225655 K7EN84 100 aa12.63□□□□□ -0.39
PFN1-201ENST00000225655 ATP5G1P05496 136 aa12.63□□□□□ -0.39
PFN1-201ENST00000225655 FAM3BP58499 235 aaPredicted RBP12.63□□□□□ -0.39
PFN1-201ENST00000225655 Q6ZTI0 123 aa12.63□□□□□ -0.39
PFN1-201ENST00000225655 C15orf54Q8N8G6 183 aa12.63□□□□□ -0.39
PFN1-201ENST00000225655 SYT8Q8NBV8 401 aa12.63□□□□□ -0.39
PFN1-201ENST00000225655 RPP21Q9H633 154 aaKnown RBP12.63□□□□□ -0.39
PFN1-201ENST00000225655 MRPL16Q9NX20 251 aaKnown RBP12.63□□□□□ -0.39
PFN1-201ENST00000225655 H3BVH4 76 aa12.62□□□□□ -0.39
PFN1-201ENST00000225655 MED14OSP0DP75 135 aa12.62□□□□□ -0.39
PFN1-201ENST00000225655 ADIRFQ15847 76 aa12.62□□□□□ -0.39
PFN1-201ENST00000225655 FAM231DQ6ZW35 169 aa12.62□□□□□ -0.39
PFN1-201ENST00000225655 C9orf85Q96MD7 179 aa12.62□□□□□ -0.39
PFN1-201ENST00000225655 PHLDA3Q9Y5J5 127 aa12.62□□□□□ -0.39
PFN1-201ENST00000225655 GATCO43716 136 aaKnown RBP12.61□□□□□ -0.39
PFN1-201ENST00000225655 ARMS2P0C7Q2 107 aa12.61□□□□□ -0.39
PFN1-201ENST00000225655 RPL19P84098 196 aaKnown RBP12.61□□□□□ -0.39
PFN1-201ENST00000225655 ZNF876PQ49A33 203 aa12.61□□□□□ -0.39
PFN1-201ENST00000225655 LINC00612Q8N6U2 182 aa12.61□□□□□ -0.39
PFN1-201ENST00000225655 NUDT10Q8NFP7 164 aa12.61□□□□□ -0.39
PFN1-201ENST00000225655 RASL10AQ92737 203 aa12.61□□□□□ -0.39
PFN1-201ENST00000225655 PTH2Q96A98 100 aa12.61□□□□□ -0.39
PFN1-201ENST00000225655 NUDT11Q96G61 164 aa12.61□□□□□ -0.39
PFN1-201ENST00000225655 RNASE7Q9H1E1 156 aaKnown RBP12.61□□□□□ -0.39
PFN1-201ENST00000225655 F5H768 121 aa12.6□□□□□ -0.39
PFN1-201ENST00000225655 RNASE3P12724 160 aaKnown RBP12.6□□□□□ -0.39
PFN1-201ENST00000225655 C18orf15Q96N68 181 aa12.6□□□□□ -0.39
PFN1-201ENST00000225655 RPL23P62829 140 aaKnown RBP12.59□□□□□ -0.39
PFN1-201ENST00000225655 PNRC1Q12796 327 aaPredicted RBP12.59□□□□□ -0.39
PFN1-201ENST00000225655 PIK3CD-AS1Q5SR53 167 aa12.59□□□□□ -0.39
PFN1-201ENST00000225655 ZFP82Q8N141 532 aa12.59□□□□□ -0.39
PFN1-201ENST00000225655 HERC2O95714 4834 aa12.59□□□□□ -0.39
PFN1-201ENST00000225655 FAT2Q9NYQ8 4349 aa12.58□□□□□ -0.39
PFN1-201ENST00000225655 A0A1W2PPQ1 181 aa12.58□□□□□ -0.4
PFN1-201ENST00000225655 A8MWL6 223 aa12.58□□□□□ -0.4
PFN1-201ENST00000225655 CT83Q5H943 113 aa12.58□□□□□ -0.4
PFN1-201ENST00000225655 FER1L6-AS1Q8NA97 138 aa12.58□□□□□ -0.4
PFN1-201ENST00000225655 ISOC2Q96AB3 205 aa12.58□□□□□ -0.4
PFN1-201ENST00000225655 TPPP3Q9BW30 176 aa12.58□□□□□ -0.4
PFN1-201ENST00000225655 OSTCQ9NRP0 149 aa12.58□□□□□ -0.4
PFN1-201ENST00000225655 TMEM218A2RU14 115 aa12.57□□□□□ -0.4
PFN1-201ENST00000225655 F2Z2F3 143 aa12.57□□□□□ -0.4
PFN1-201ENST00000225655 F8W036 122 aa12.57□□□□□ -0.4
PFN1-201ENST00000225655 OR5AL1P0C617 328 aa12.57□□□□□ -0.4
PFN1-201ENST00000225655 SPANXN1Q5VSR9 72 aa12.57□□□□□ -0.4
PFN1-201ENST00000225655 OR4C5Q8NGB2 326 aa12.57□□□□□ -0.4
PFN1-201ENST00000225655 SFRP2Q96HF1 295 aa12.57□□□□□ -0.4
PFN1-201ENST00000225655 KIAA1109Q2LD37 5005 aa12.57□□□□□ -0.4
PFN1-201ENST00000225655 DNAH2Q9P225 4427 aa12.57□□□□□ -0.4
PFN1-201ENST00000225655 TRAV4A0A0B4J268 109 aa12.56□□□□□ -0.4
PFN1-201ENST00000225655 A8MWV9 139 aa12.56□□□□□ -0.4
PFN1-201ENST00000225655 M0R381 172 aa12.56□□□□□ -0.4
PFN1-201ENST00000225655 CIDEAO60543 219 aa12.56□□□□□ -0.4
PFN1-201ENST00000225655 NUDT3O95989 172 aa12.56□□□□□ -0.4
PFN1-201ENST00000225655 C1orf134Q5TEV5 83 aa12.56□□□□□ -0.4
PFN1-201ENST00000225655 OR10G8Q8NGN5 311 aa12.56□□□□□ -0.4
PFN1-201ENST00000225655 SCRT2Q9NQ03 307 aa12.56□□□□□ -0.4
PFN1-201ENST00000225655 SNAI2O43623 268 aa12.55□□□□□ -0.4
PFN1-201ENST00000225655 CACNG7P62955 275 aa12.55□□□□□ -0.4
PFN1-201ENST00000225655 SLAQ13239 276 aa12.55□□□□□ -0.4
PFN1-201ENST00000225655 ZNRF2Q8NHG8 242 aa12.55□□□□□ -0.4
PFN1-201ENST00000225655 BORCS7Q96B45 105 aa12.55□□□□□ -0.4
PFN1-201ENST00000225655 TRGV4A0A0C4DH28 118 aa12.54□□□□□ -0.4
PFN1-201ENST00000225655 PPP1R2P9O14990 202 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 133.8 ms