RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 OR4C5Q8NGB2 326 aa8.81□□□□□ -1
LSM5-201ENST00000223084 HHLA3Q9XRX5 114 aa8.81□□□□□ -1
LSM5-201ENST00000223084 A0A096LPF7 62 aa8.8□□□□□ -1
LSM5-201ENST00000223084 RAB19A4D1S5 217 aa8.8□□□□□ -1
LSM5-201ENST00000223084 H3BNG1 76 aa8.8□□□□□ -1
LSM5-201ENST00000223084 H3BVH4 76 aa8.8□□□□□ -1
LSM5-201ENST00000223084 ASIPP42127 132 aa8.8□□□□□ -1
LSM5-201ENST00000223084 CRYBA4P53673 196 aa8.8□□□□□ -1
LSM5-201ENST00000223084 BLOC1S1P78537 153 aa8.8□□□□□ -1
LSM5-201ENST00000223084 ZNF506Q5JVG8 444 aa8.8□□□□□ -1
LSM5-201ENST00000223084 TEX261Q6UWH6 196 aa8.8□□□□□ -1
LSM5-201ENST00000223084 ZNF575Q86XF7 245 aa8.8□□□□□ -1
LSM5-201ENST00000223084 TXNDC17Q9BRA2 123 aa8.8□□□□□ -1
LSM5-201ENST00000223084 MLST8Q9BVC4 326 aa8.8□□□□□ -1
LSM5-201ENST00000223084 PRO0255Q9UI72 69 aa8.8□□□□□ -1
LSM5-201ENST00000223084 VAX2Q9UIW0 290 aa8.8□□□□□ -1
LSM5-201ENST00000223084 LINC00588Q9Y4M8 146 aa8.8□□□□□ -1
LSM5-201ENST00000223084 DNAH10Q8IVF4 4471 aa8.8□□□□□ -1
LSM5-201ENST00000223084 CCL18P55774 89 aa8.79□□□□□ -1
LSM5-201ENST00000223084 ESRGQ1W209 222 aa8.79□□□□□ -1
LSM5-201ENST00000223084 PRR27Q6MZM9 219 aa8.79□□□□□ -1
LSM5-201ENST00000223084 MED9Q9NWA0 146 aa8.79□□□□□ -1
LSM5-201ENST00000223084 PCLOQ9Y6V0 5065 aa8.78□□□□□ -1
LSM5-201ENST00000223084 IGHV3-73A0A0B4J1V6 119 aa8.78□□□□□ -1
LSM5-201ENST00000223084 RS1O15537 224 aa8.78□□□□□ -1
LSM5-201ENST00000223084 PDE6DO43924 150 aa8.78□□□□□ -1
LSM5-201ENST00000223084 ARMS2P0C7Q2 107 aa8.78□□□□□ -1
LSM5-201ENST00000223084 RPL19P84098 196 aaKnown RBP8.78□□□□□ -1
LSM5-201ENST00000223084 SLAQ13239 276 aa8.78□□□□□ -1
LSM5-201ENST00000223084 CENPWQ5EE01 88 aa8.78□□□□□ -1
LSM5-201ENST00000223084 CFAP126Q5VTH2 177 aa8.78□□□□□ -1
LSM5-201ENST00000223084 LINC00528Q8N1L1 170 aa8.78□□□□□ -1
LSM5-201ENST00000223084 IL36BQ9NZH7 164 aa8.78□□□□□ -1
LSM5-201ENST00000223084 ICOSQ9Y6W8 199 aa8.78□□□□□ -1
LSM5-201ENST00000223084 LCE2BO14633 110 aa8.77□□□□□ -1.01
LSM5-201ENST00000223084 IGLV2-8P01709 118 aa8.77□□□□□ -1.01
LSM5-201ENST00000223084 DNLZQ5SXM8 178 aa8.77□□□□□ -1.01
LSM5-201ENST00000223084 ZNRF2Q8NHG8 242 aa8.77□□□□□ -1.01
LSM5-201ENST00000223084 LYPD6BQ8NI32 183 aa8.77□□□□□ -1.01
LSM5-201ENST00000223084 PTH2Q96A98 100 aa8.77□□□□□ -1.01
LSM5-201ENST00000223084 JPT2Q9H910 190 aa8.77□□□□□ -1.01
LSM5-201ENST00000223084 TRBV20OR9-2A0A075B6H5 130 aa8.76□□□□□ -1.01
LSM5-201ENST00000223084 LOC100131303A0A0U1RQF7 123 aa8.76□□□□□ -1.01
LSM5-201ENST00000223084 MGST1P10620 155 aaKnown RBP8.76□□□□□ -1.01
LSM5-201ENST00000223084 GYPEP15421 78 aa8.76□□□□□ -1.01
LSM5-201ENST00000223084 GATA1P15976 413 aaPredicted RBP8.76□□□□□ -1.01
LSM5-201ENST00000223084 PCNPQ8WW12 178 aaKnown RBP8.76□□□□□ -1.01
LSM5-201ENST00000223084 RBFOX3A6NFN3 312 aa8.75□□□□□ -1.01
LSM5-201ENST00000223084 K7EQD1 137 aa8.75□□□□□ -1.01
LSM5-201ENST00000223084 TAGLN2P37802 199 aaKnown RBP8.75□□□□□ -1.01
LSM5-201ENST00000223084 GNG4P50150 75 aa8.75□□□□□ -1.01
LSM5-201ENST00000223084 FAM3BP58499 235 aaPredicted RBP8.75□□□□□ -1.01
LSM5-201ENST00000223084 MRPL23Q16540 153 aaKnown RBP8.75□□□□□ -1.01
LSM5-201ENST00000223084 SAMD10Q9BYL1 202 aa8.75□□□□□ -1.01
LSM5-201ENST00000223084 PARLQ9H300 379 aa8.75□□□□□ -1.01
LSM5-201ENST00000223084 SCRT2Q9NQ03 307 aa8.75□□□□□ -1.01
LSM5-201ENST00000223084 M0R381 172 aa8.74□□□□□ -1.01
LSM5-201ENST00000223084 IFITM2Q01629 132 aa8.74□□□□□ -1.01
LSM5-201ENST00000223084 TOR2AQ5JU69 321 aa8.74□□□□□ -1.01
LSM5-201ENST00000223084 Q6ZR54 194 aa8.74□□□□□ -1.01
LSM5-201ENST00000223084 Q6ZSN1 163 aa8.74□□□□□ -1.01
LSM5-201ENST00000223084 SLC25A29Q8N8R3 303 aa8.74□□□□□ -1.01
LSM5-201ENST00000223084 MRPS16Q9Y3D3 137 aaKnown RBP8.74□□□□□ -1.01
LSM5-201ENST00000223084 PHLDA3Q9Y5J5 127 aa8.74□□□□□ -1.01
LSM5-201ENST00000223084 MUC21A0A0G2JKD1 596 aa8.73□□□□□ -1.01
LSM5-201ENST00000223084 MUC21A0A140T8X8 626 aa8.73□□□□□ -1.01
LSM5-201ENST00000223084 SRIP30626 198 aa8.73□□□□□ -1.01
LSM5-201ENST00000223084 NEGR1Q7Z3B1 354 aa8.73□□□□□ -1.01
LSM5-201ENST00000223084 SYT8Q8NBV8 401 aa8.73□□□□□ -1.01
LSM5-201ENST00000223084 Q9H8V8 135 aa8.73□□□□□ -1.01
LSM5-201ENST00000223084 A0A087WWL8 130 aa8.72□□□□□ -1.01
LSM5-201ENST00000223084 NBDYA0A0U1RRE5 68 aa8.72□□□□□ -1.01
LSM5-201ENST00000223084 C19orf71A6NCJ1 209 aa8.72□□□□□ -1.01
LSM5-201ENST00000223084 A8MWV9 139 aa8.72□□□□□ -1.01
LSM5-201ENST00000223084 GZMBP10144 247 aa8.72□□□□□ -1.01
LSM5-201ENST00000223084 CEBPGP53567 150 aa8.72□□□□□ -1.01
LSM5-201ENST00000223084 PIK3CD-AS1Q5SR53 167 aa8.72□□□□□ -1.01
LSM5-201ENST00000223084 UFSP1Q6NVU6 142 aa8.72□□□□□ -1.01
LSM5-201ENST00000223084 LYPD5Q6UWN5 251 aa8.72□□□□□ -1.01
LSM5-201ENST00000223084 ZFP82Q8N141 532 aa8.72□□□□□ -1.01
LSM5-201ENST00000223084 OR10AG1Q8NH19 301 aa8.72□□□□□ -1.01
LSM5-201ENST00000223084 DAZAP1Q96EP5 407 aaKnown RBP8.72□□□□□ -1.01
LSM5-201ENST00000223084 UPK3BQ9BT76 320 aa8.72□□□□□ -1.01
LSM5-201ENST00000223084 EIF5A2Q9GZV4 153 aaKnown RBP8.72□□□□□ -1.01
LSM5-201ENST00000223084 FRAS1Q86XX4 4008 aa8.71□□□□□ -1.01
LSM5-201ENST00000223084 RTL8CO15255 209 aa8.71□□□□□ -1.02
LSM5-201ENST00000223084 CIDEAO60543 219 aa8.71□□□□□ -1.02
LSM5-201ENST00000223084 CXCL1P09341 107 aa8.71□□□□□ -1.02
LSM5-201ENST00000223084 MED14OSP0DP75 135 aa8.71□□□□□ -1.02
LSM5-201ENST00000223084 SSTP61278 116 aa8.71□□□□□ -1.02
LSM5-201ENST00000223084 FAM74A4Q5TZK3 123 aa8.71□□□□□ -1.02
LSM5-201ENST00000223084 OR2D3Q8NGH3 330 aa8.71□□□□□ -1.02
LSM5-201ENST00000223084 OCC1Q8TAD7 63 aa8.71□□□□□ -1.02
LSM5-201ENST00000223084 SMIM12Q96EX1 92 aa8.71□□□□□ -1.02
LSM5-201ENST00000223084 SFRP2Q96HF1 295 aa8.71□□□□□ -1.02
LSM5-201ENST00000223084 PRADC1Q9BSG0 188 aa8.71□□□□□ -1.02
LSM5-201ENST00000223084 DNAH2Q9P225 4427 aa8.7□□□□□ -1.02
LSM5-201ENST00000223084 TRBV6-4A0A1B0GX49 114 aa8.7□□□□□ -1.02
LSM5-201ENST00000223084 TMEM250H0YL14 139 aa8.7□□□□□ -1.02
LSM5-201ENST00000223084 K7EN84 100 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms